| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is cysC [H]
Identifier: 78778554
GI number: 78778554
Start: 161684
End: 162319
Strand: Direct
Name: cysC [H]
Synonym: PMT9312_0168
Alternate gene names: 78778554
Gene position: 161684-162319 (Clockwise)
Preceding gene: 78778553
Following gene: 78778556
Centisome position: 9.46
GC content: 31.6
Gene sequence:
>636_bases ATGATGCAAAAAATGAAAGAACAAGATCAAACAAATTCAACCAATATAAAGTGGCACAATTTAACTATTGATAGAGATAA GTTAGAGAAAATGAGAGGTCATAAAGGAATGGTCATTTGGTTTACAGGTTTATCAGGCTCTGGTAAAAGTACTTTGGCCA ACGCTTTAAATGAAGTTTTACACTTAGATGGTTTTTCAACTTACGTGTTGGATGGAGATAATATAAGGCACGGTTTATGT AGAGATCTTGGTTTTTCGGATGAAGATAGAGAAGAAAATATAAGAAGAATTGGAGAAGTTGCGAATTTATTTATGAATGC TGGGATAATAACTATTACAGCATTCGTTTCACCATTTATTAGCGATAGAGATAAGGTGAGAAAAATTATTGGATCTAAAG ATTTTATTGAAGTTTATTGTGCTGCAGATATCAAAGTTTGCGAAAACAGGGATACTAAAGGTCTTTATAAGAAAGCTCGT TTAGGGGAAATTAAGGATTTTACTGGGATTTCTAGTCCATATGAAGCTCCTCATAATCCAGAAATTATTGTTGATACAGG TTCGTTAGATTTAAAGGATTCTGTTGAAAAAGTTATTAACTATCTTAAAAAAGAAAACTTCCTTAAAAAGGGTTAA
Upstream 100 bases:
>100_bases CCAGTTACAGGGCGATATGGTATTGAAATCAATTGAGTTTCTTCGTAAAGAGGGATTTCATAATTTATGAAGCAAGGGTT AAGATAGGTTTTTAATTTTG
Downstream 100 bases:
>100_bases TAGAGAAATATAAGTTCATTTATTTTGAAGATAATTGTCCGCTCCAATATTTGATAACTTACTATTTTTAGTTCTTACCT GTGTATGAAGATTTTCTCTG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MMQKMKEQDQTNSTNIKWHNLTIDRDKLEKMRGHKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYVLDGDNIRHGLC RDLGFSDEDREENIRRIGEVANLFMNAGIITITAFVSPFISDRDKVRKIIGSKDFIEVYCAADIKVCENRDTKGLYKKAR LGEIKDFTGISSPYEAPHNPEIIVDTGSLDLKDSVEKVINYLKKENFLKKG
Sequences:
>Translated_211_residues MMQKMKEQDQTNSTNIKWHNLTIDRDKLEKMRGHKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYVLDGDNIRHGLC RDLGFSDEDREENIRRIGEVANLFMNAGIITITAFVSPFISDRDKVRKIIGSKDFIEVYCAADIKVCENRDTKGLYKKAR LGEIKDFTGISSPYEAPHNPEIIVDTGSLDLKDSVEKVINYLKKENFLKKG >Mature_211_residues MMQKMKEQDQTNSTNIKWHNLTIDRDKLEKMRGHKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYVLDGDNIRHGLC RDLGFSDEDREENIRRIGEVANLFMNAGIITITAFVSPFISDRDKVRKIIGSKDFIEVYCAADIKVCENRDTKGLYKKAR LGEIKDFTGISSPYEAPHNPEIIVDTGSLDLKDSVEKVINYLKKENFLKKG
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=202, Percent_Identity=48.5148514851485, Blast_Score=201, Evalue=3e-52, Organism=Homo sapiens, GI34447231, Length=213, Percent_Identity=46.9483568075117, Blast_Score=200, Evalue=6e-52, Organism=Homo sapiens, GI62912492, Length=213, Percent_Identity=46.9483568075117, Blast_Score=200, Evalue=6e-52, Organism=Escherichia coli, GI1789107, Length=195, Percent_Identity=52.3076923076923, Blast_Score=223, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17542422, Length=205, Percent_Identity=50.2439024390244, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322852, Length=202, Percent_Identity=50.4950495049505, Blast_Score=192, Evalue=2e-50, Organism=Drosophila melanogaster, GI24667032, Length=213, Percent_Identity=46.9483568075117, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24667028, Length=213, Percent_Identity=46.9483568075117, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24667036, Length=213, Percent_Identity=46.9483568075117, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24667040, Length=208, Percent_Identity=47.1153846153846, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI116007838, Length=208, Percent_Identity=47.1153846153846, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24667044, Length=208, Percent_Identity=47.1153846153846, Blast_Score=187, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 23877; Mature: 23877
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQKMKEQDQTNSTNIKWHNLTIDRDKLEKMRGHKGMVIWFTGLSGSGKSTLANALNEVL CCCHHHHHHCCCCCCEEEEEEEECHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH HLDGFSTYVLDGDNIRHGLCRDLGFSDEDREENIRRIGEVANLFMNAGIITITAFVSPFI HCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SDRDKVRKIIGSKDFIEVYCAADIKVCENRDTKGLYKKARLGEIKDFTGISSPYEAPHNP CCHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCC EIIVDTGSLDLKDSVEKVINYLKKENFLKKG EEEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMQKMKEQDQTNSTNIKWHNLTIDRDKLEKMRGHKGMVIWFTGLSGSGKSTLANALNEVL CCCHHHHHHCCCCCCEEEEEEEECHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH HLDGFSTYVLDGDNIRHGLCRDLGFSDEDREENIRRIGEVANLFMNAGIITITAFVSPFI HCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SDRDKVRKIIGSKDFIEVYCAADIKVCENRDTKGLYKKARLGEIKDFTGISSPYEAPHNP CCHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCC EIIVDTGSLDLKDSVEKVINYLKKENFLKKG EEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]