Click here to switch to the map view.

The map label for this gene is 78778528

Identifier: 78778528

GI number: 78778528

Start: 138090

End: 138341

Strand: Reverse

Name: 78778528

Synonym: PMT9312_0142

Alternate gene names: NA

Gene position: 138341-138090 (Counterclockwise)

Preceding gene: 78778531

Following gene: 78778527

Centisome position: 8.09

GC content: 31.35

Gene sequence:

>252_bases
ATGTGCATTTGCATCAACTGTAAATGGGTTGATAGATGTATCACATATCATGACGTTGAAAATAAGCATGGTGTTGATAA
TATTTGCGTTATGCCTGATTTTAAAGCAAAAAAACCATTCATTCATGTCAGTATAGTTAAAGATAAGAATGGTGCTTATA
AAACAGATTGGGATGTGCAAACTTGTGAAAGTTTTATAAAAGAATTTGGTAAATGGTCTAAATGTAATCCAGGCTTGGAA
TTACCTGTTTAA

Upstream 100 bases:

>100_bases
ATAAAATGCCAATTATAAAATTTTATACTTCTTTCTAATTCATCAATGATTAGTGTATGATCAGTAAGAACGTTATTACC
CTTCATTTTATTTATTAATT

Downstream 100 bases:

>100_bases
AGGTAATACATGACACTTAACCCCCAAGGAAGGCAAAACTTCACTACATTAGTGATACATAGCACAGACAATTCCTTTGG
ATTTGGATTTAGAGCAAACA

Product: putative Ycf34

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MCICINCKWVDRCITYHDVENKHGVDNICVMPDFKAKKPFIHVSIVKDKNGAYKTDWDVQTCESFIKEFGKWSKCNPGLE
LPV

Sequences:

>Translated_83_residues
MCICINCKWVDRCITYHDVENKHGVDNICVMPDFKAKKPFIHVSIVKDKNGAYKTDWDVQTCESFIKEFGKWSKCNPGLE
LPV
>Mature_83_residues
MCICINCKWVDRCITYHDVENKHGVDNICVMPDFKAKKPFIHVSIVKDKNGAYKTDWDVQTCESFIKEFGKWSKCNPGLE
LPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9609; Mature: 9609

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
8.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCICINCKWVDRCITYHDVENKHGVDNICVMPDFKAKKPFIHVSIVKDKNGAYKTDWDVQ
CEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHH
TCESFIKEFGKWSKCNPGLELPV
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MCICINCKWVDRCITYHDVENKHGVDNICVMPDFKAKKPFIHVSIVKDKNGAYKTDWDVQ
CEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHH
TCESFIKEFGKWSKCNPGLELPV
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA