BacMap

Definition	Prochlorococcus marinus str. MIT 9312, complete genome.
Accession	NC_007577
Length	1,709,204

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The map label for this gene is cbiO [H]

Identifier: 78778514

GI number: 78778514

Start: 123727

End: 124401

Strand: Direct

Name: cbiO [H]

Synonym: PMT9312_0128

Alternate gene names: 78778514

Gene position: 123727-124401 (Clockwise)

Preceding gene: 78778513

Following gene: 78778516

Centisome position: 7.24

GC content: 30.67

Gene sequence:

>675_bases
ATGCGAGATTCTCTAGAAAATGGAATACCTCATATTCATTTCAAAGATGTCTCTTTTTCATATCCTGGGAAAAAAGACAA
TTTAATTTTTAAATGTAATTTTTCAATAAAAAAACCTGGATTTTGGATGGTTGTCGGTAAAAACGGGAGTGGAAAAAGTA
CCCTTTTAAAATTAATTAATGGAATAATTAAACCCAAAAATGGAGTCATTAATTCTAAAGCAGATATAGGGATGGTATTT
CAAAACCCTGATCATCAAATATTGATGCCAAATTGCAGAAGCGAACTTCTGATAAATATTAACCAAAATATAAGTGATTA
TGAAATTAATAAAAAAATTGAATATGTGCTTGCTCAGGTGGGATTGACTGGTTTTGAAAAAAGGCCAGTACACACGTTAA
GCGGAGGTCAAAAACAACGCTTAACTATTGCATGCGTTCTTATTAGTAATAGGAATTTTATTCTTTTAGATGAGCCTACA
GCGTTACTTGATCAAACCAGCCAATTAAAAGTTTTAAAAACTATTAAGAATCTTACAAGTGACCATAAAAAACCTTTATC
CGCTTTGTGGATTACACATCGTTATGAAGAATTAAATTACGCTGATTCAGTAGCAGAGCTGAAAAATGGTTTTTTATCTA
GATGGCAAGAACCATCAAAATTTCAATATAATTAA

Upstream 100 bases:

>100_bases
GAGCTCAAGAAATCATTTCAGTGCAGATATATGAAAAATCATCAGTAGCAGGAGGAGCTAAAAGACCAGGATTTTCTCTC
GATATAGATTAATAGAATTA

Downstream 100 bases:

>100_bases
ATCTTTTACTTGTCATAAGGCACTTTAAAGAGCTAAATTCATTTTATATTCCTCGGTAGCTCAGCGGTAGAGCGATCGAC
TGTTAATCGATTGGTCGCAG

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRDSLENGIPHIHFKDVSFSYPGKKDNLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIIKPKNGVINSKADIGMVF
QNPDHQILMPNCRSELLININQNISDYEINKKIEYVLAQVGLTGFEKRPVHTLSGGQKQRLTIACVLISNRNFILLDEPT
ALLDQTSQLKVLKTIKNLTSDHKKPLSALWITHRYEELNYADSVAELKNGFLSRWQEPSKFQYN

Sequences:

>Translated_224_residues
MRDSLENGIPHIHFKDVSFSYPGKKDNLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIIKPKNGVINSKADIGMVF
QNPDHQILMPNCRSELLININQNISDYEINKKIEYVLAQVGLTGFEKRPVHTLSGGQKQRLTIACVLISNRNFILLDEPT
ALLDQTSQLKVLKTIKNLTSDHKKPLSALWITHRYEELNYADSVAELKNGFLSRWQEPSKFQYN
>Mature_224_residues
MRDSLENGIPHIHFKDVSFSYPGKKDNLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIIKPKNGVINSKADIGMVF
QNPDHQILMPNCRSELLININQNISDYEINKKIEYVLAQVGLTGFEKRPVHTLSGGQKQRLTIACVLISNRNFILLDEPT
ALLDQTSQLKVLKTIKNLTSDHKKPLSALWITHRYEELNYADSVAELKNGFLSRWQEPSKFQYN

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=29.9107142857143, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI255708477, Length=223, Percent_Identity=28.6995515695067, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=29.9107142857143, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=29.9107142857143, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI42741659, Length=229, Percent_Identity=27.5109170305677, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI148612844, Length=226, Percent_Identity=29.646017699115, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI171184400, Length=231, Percent_Identity=29.8701298701299, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI27477115, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI31657092, Length=223, Percent_Identity=24.2152466367713, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI148612853, Length=173, Percent_Identity=31.2138728323699, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1787758, Length=215, Percent_Identity=30.2325581395349, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786563, Length=176, Percent_Identity=32.9545454545455, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081709, Length=208, Percent_Identity=28.8461538461538, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788225, Length=194, Percent_Identity=31.4432989690722, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=26.8398268398268, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786398, Length=202, Percent_Identity=29.2079207920792, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787712, Length=228, Percent_Identity=28.9473684210526, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789873, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788506, Length=191, Percent_Identity=32.4607329842932, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787500, Length=171, Percent_Identity=29.2397660818713, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789032, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=25.5506607929515, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787112, Length=214, Percent_Identity=24.7663551401869, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=29.7674418604651, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=27.6190476190476, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=27.8846153846154, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789962, Length=207, Percent_Identity=28.9855072463768, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786253, Length=205, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=30.0925925925926, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=25.4464285714286, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787105, Length=227, Percent_Identity=25.9911894273128, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=27.8301886792453, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790739, Length=227, Percent_Identity=23.3480176211454, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994943, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787547, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI145693107, Length=235, Percent_Identity=25.9574468085106, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790162, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=25.8215962441315, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786319, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787772, Length=205, Percent_Identity=28.2926829268293, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788165, Length=172, Percent_Identity=27.3255813953488, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=185, Percent_Identity=30.2702702702703, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87081782, Length=192, Percent_Identity=25, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=221, Percent_Identity=31.2217194570136, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI212646699, Length=233, Percent_Identity=30.0429184549356, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25146777, Length=220, Percent_Identity=29.0909090909091, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17565938, Length=224, Percent_Identity=29.0178571428571, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=238, Percent_Identity=28.9915966386555, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=224, Percent_Identity=29.4642857142857, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=233, Percent_Identity=28.3261802575107, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=232, Percent_Identity=26.2931034482759, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=225, Percent_Identity=28.8888888888889, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17559834, Length=175, Percent_Identity=33.1428571428571, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17555318, Length=168, Percent_Identity=31.547619047619, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=162, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=223, Percent_Identity=28.2511210762332, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=207, Percent_Identity=27.0531400966184, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=168, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=168, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=168, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=161, Percent_Identity=34.1614906832298, Blast_Score=75, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6324985, Length=221, Percent_Identity=31.6742081447964, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321121, Length=173, Percent_Identity=29.4797687861272, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322640, Length=220, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363262, Length=231, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24653245, Length=231, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI23397593, Length=232, Percent_Identity=28.448275862069, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI85726357, Length=229, Percent_Identity=29.6943231441048, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221500365, Length=178, Percent_Identity=26.4044943820225, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007184, Length=178, Percent_Identity=26.4044943820225, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17136662, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581191, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581189, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581193, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581195, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574533, Length=195, Percent_Identity=32.3076923076923, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24666836, Length=160, Percent_Identity=33.125, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24642252, Length=161, Percent_Identity=31.055900621118, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI18859989, Length=161, Percent_Identity=31.055900621118, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574150, Length=211, Percent_Identity=26.5402843601896, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI116007328, Length=211, Percent_Identity=26.5402843601896, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR022112 [H]

Pfam domain/function: PF00005 ABC_tran; PF12370 CoABC_C [H]

EC number: NA

Molecular weight: Translated: 25458; Mature: 25458

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDSLENGIPHIHFKDVSFSYPGKKDNLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLIN
CCCCCHHCCCEEEEECCEEECCCCCCCEEEEEECEECCCCEEEEEECCCCCHHHHHHHHH
GIIKPKNGVINSKADIGMVFQNPDHQILMPNCRSELLININQNISDYEINKKIEYVLAQV
HHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH
GLTGFEKRPVHTLSGGQKQRLTIACVLISNRNFILLDEPTALLDQTSQLKVLKTIKNLTS
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHH
DHKKPLSALWITHRYEELNYADSVAELKNGFLSRWQEPSKFQYN
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRDSLENGIPHIHFKDVSFSYPGKKDNLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLIN
CCCCCHHCCCEEEEECCEEECCCCCCCEEEEEECEECCCCEEEEEECCCCCHHHHHHHHH
GIIKPKNGVINSKADIGMVFQNPDHQILMPNCRSELLININQNISDYEINKKIEYVLAQV
HHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH
GLTGFEKRPVHTLSGGQKQRLTIACVLISNRNFILLDEPTALLDQTSQLKVLKTIKNLTS
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHH
DHKKPLSALWITHRYEELNYADSVAELKNGFLSRWQEPSKFQYN
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA