Click here to switch to the map view.

The map label for this gene is 78778494

Identifier: 78778494

GI number: 78778494

Start: 110760

End: 111410

Strand: Reverse

Name: 78778494

Synonym: PMT9312_0109

Alternate gene names: NA

Gene position: 111410-110760 (Counterclockwise)

Preceding gene: 78778495

Following gene: 78778493

Centisome position: 6.52

GC content: 29.65

Gene sequence:

>651_bases
TTGAGTATCCCAAGAGTAATAATTGTTATAGCATCTAGTCTTGATGGAAGAATTGCATTTCCTGAAGGTGGAGAATCGCA
TCTTGGAAGCGAAGAAGATAAAAAAATGTTAAATCAAAACTTATCAATGGTTGACGCCACCATTTTCGGTTTAGGTACTT
TATTAGCTCATCAATCAACTTACCTAATTAAAAATCTCAATGATAATAACGAAGTAAAAATATCAAAAAGCCAACCAATT
TCTATAGTTGCTTCAAATAGCAAAAAATTTAATAGTAATTGGAAATACTTTCGTCAACCAATTAGAAGATGGCTAATAAG
CTCAAGTAAAGTTGATAATTTGTCGAAGAATGACTTCGAGAAACAACTCTTTTTCGAACATTCATGGGGGAAAACTTTAA
TTTCACTCAAAAAGCAAGGGATAAATGATCTAGCTCTTTTAGGAGGTGCAAAACTTATAAATTCATTTATAAAAGAGGAT
CTAATAACAGATATAAAAATTACAATAATTCCACGAATTATTGGAGGTAGATATACATGGATCCCTCCAAAACAAACAAA
TGAGATTTTTAATCTCAAAAGACTATGGGAAATAAAATCAATTAAAAATTTAATGCATAATGAAATCCATGTGCATTACA
AAAAAATTTGA

Upstream 100 bases:

>100_bases
GACTCCAAGAGAGCCCAAATAATGCTGCAGAAATTTATGTTGATCAAAAGTTAACCAATTCATTGCAGTTGAAATTTGAA
AATAGTTTAGTCACACAAAC

Downstream 100 bases:

>100_bases
AATAGATTCAATAATAAATGAACCAAAAAATACATAAAGTTGAAGTCAAATTGTCAATTAAAGAAATCTCCAAAGAGATA
TGGAATGAATTAGCAAATGA

Product: ribD/ribG-like

Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+

Alternate protein names: Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; Bifunctional Deaminase-Reductase Domain-Containing Protein; Pyrimidine Reductase; Bifunctional Deaminase-Reductase-Like

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSIPRVIIVIASSLDGRIAFPEGGESHLGSEEDKKMLNQNLSMVDATIFGLGTLLAHQSTYLIKNLNDNNEVKISKSQPI
SIVASNSKKFNSNWKYFRQPIRRWLISSSKVDNLSKNDFEKQLFFEHSWGKTLISLKKQGINDLALLGGAKLINSFIKED
LITDIKITIIPRIIGGRYTWIPPKQTNEIFNLKRLWEIKSIKNLMHNEIHVHYKKI

Sequences:

>Translated_216_residues
MSIPRVIIVIASSLDGRIAFPEGGESHLGSEEDKKMLNQNLSMVDATIFGLGTLLAHQSTYLIKNLNDNNEVKISKSQPI
SIVASNSKKFNSNWKYFRQPIRRWLISSSKVDNLSKNDFEKQLFFEHSWGKTLISLKKQGINDLALLGGAKLINSFIKED
LITDIKITIIPRIIGGRYTWIPPKQTNEIFNLKRLWEIKSIKNLMHNEIHVHYKKI
>Mature_215_residues
SIPRVIIVIASSLDGRIAFPEGGESHLGSEEDKKMLNQNLSMVDATIFGLGTLLAHQSTYLIKNLNDNNEVKISKSQPIS
IVASNSKKFNSNWKYFRQPIRRWLISSSKVDNLSKNDFEKQLFFEHSWGKTLISLKKQGINDLALLGGAKLINSFIKEDL
ITDIKITIIPRIIGGRYTWIPPKQTNEIFNLKRLWEIKSIKNLMHNEIHVHYKKI

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.1.1.193

Molecular weight: Translated: 24729; Mature: 24598

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPRVIIVIASSLDGRIAFPEGGESHLGSEEDKKMLNQNLSMVDATIFGLGTLLAHQST
CCCCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
YLIKNLNDNNEVKISKSQPISIVASNSKKFNSNWKYFRQPIRRWLISSSKVDNLSKNDFE
EEEECCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH
KQLFFEHSWGKTLISLKKQGINDLALLGGAKLINSFIKEDLITDIKITIIPRIIGGRYTW
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEE
IPPKQTNEIFNLKRLWEIKSIKNLMHNEIHVHYKKI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure 
SIPRVIIVIASSLDGRIAFPEGGESHLGSEEDKKMLNQNLSMVDATIFGLGTLLAHQST
CCCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
YLIKNLNDNNEVKISKSQPISIVASNSKKFNSNWKYFRQPIRRWLISSSKVDNLSKNDFE
EEEECCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH
KQLFFEHSWGKTLISLKKQGINDLALLGGAKLINSFIKEDLITDIKITIIPRIIGGRYTW
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEE
IPPKQTNEIFNLKRLWEIKSIKNLMHNEIHVHYKKI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+

Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA