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The map label for this gene is sufB [C]

Identifier: 78778460

GI number: 78778460

Start: 79376

End: 80818

Strand: Reverse

Name: sufB [C]

Synonym: PMT9312_0075

Alternate gene names: 78778460

Gene position: 80818-79376 (Counterclockwise)

Preceding gene: 78778466

Following gene: 78778459

Centisome position: 4.73

GC content: 34.86

Gene sequence:

>1443_bases
ATGGTTAACGAAAATTTAGTTAAAGATGTAGTAAAGGAGCCATACAAATATGGTTTCGTTACAGATATTGAAACTGAAAA
AATTGCAAAGGGATTGAATGAAGATATCATCAGACTAATTTCAGAAAAAAAAGAAGAGCCAAAATATCTTCTTGATTTTA
GATTAAAAGCTTTTAAAAAATGGCAAAAAATGGAGGAACCTAATTGGGCAGAATTAGGATATAAAGAGATCAATTATCAA
GATATAATTTATTATTCTGCTCCCAAACAAAAAGAAAAGATTTCTAGTTTGGATGAAGTTGATCCCAAACTTCTTGAGAC
TTTTGACAAATTAGGAATACCTCTTACTGAGCAAAAAAAACTCACGAATGTAGCAGTAGATGCTGTGTTTGATAGTGTTT
CTATAGCTACAACATTTAGAGAGGAACTTGCCGAACATGGAGTTATATTTTGCTCAATCAGTGAAGCAGTAAAAAATCAC
TCAGATTTGATTGAAAAATATTTAGGTACAGTAGTTCCAGCTGGTGATAATTATTTTGCAGCACTAAATTCTGCTGTTTT
TAGTGATGGTTCTTTTGTTTATATCCCAAAAGGCGTGACCTGTCCTATGGACCTATCTTCCTACTTTAGAATTAATAGTG
GTGATTCTGGACAATTCGAGAGAACACTAATAATTGCCGAAGAATCAAGTTCTGTAAGCTATCTAGAAGGCTGTACAGCC
CCAATGTTTGATACAAATACCCTACATGCTGCAGTAGTAGAACTAATAGCCCTAGACGATGCCGCAATAAAGTATTCAAC
GGTACAAAATTGGTATGCTGGTGATGAAAAAGGTGTTGGCGGAATTTTTAATTTTGTCACTAAAAGAGGAAAATGTTTAG
GTAAGAGAAGTAAAATTAGTTGGTCTCAGGTTGAAACAGGTTCTGCAATTACCTGGAAATATCCAAGTTGTCTTCTTTTA
GGCGAAGAATCTGTAGGGGAATTTTATTCAGTAGCACTCACAAATAATCTTCAACAAGCAGATACAGGCACAAAAATGAT
CCATATTGGTCCCAAAACCAAATCAACTATTGTTAGCAAAGGAATAAGTGCAGGCAATTCAATCAATAGCTATAGAGGCC
TTGTCAAAATGGGTACAAAAGCAATTGGATCAAGAAATTACAGCCAATGTGATTCAATGTTAATAGGGGATCAAGCTTCT
GCAAATACATTTCCTTATATAAAATCTCAACAACCCAATTCGGAAATTGAGCATGAAGCAAGCACATGTAGAATCTCTGA
AGATCAACTTTTTTATCTCCAGAGCAGAGGTATAGAATTTGAAGAGGCAATATCTATGATGGTCAGTGGTTTCTGCAGAG
ATGTATTTAATCAATTACCTATGGAATTTGCTGCTGAAGCAGATAAGTTACTGGCTCTTAAACTCGAGGGCTCAGTAGGT
TAA

Upstream 100 bases:

>100_bases
ACATTAATTTTTAGTTTTAATAAAGGGAAAAAACTCAATATTAGGGGTATCTTTCGTTTAAAGTATATAAAGCTAATTGT
AATAAGTTATTTTTGATAAC

Downstream 100 bases:

>100_bases
TTAATCAATTTCTAAAGTGAAATGCAAAGTAACATGAAAGAATCAGATCCAATTTTAGAAGTTCGAAATCTCTTTGCATC
TACTGATAATCTTCCAATTT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKKWQKMEEPNWAELGYKEINYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
SDLIEKYLGTVVPAGDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Sequences:

>Translated_480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKKWQKMEEPNWAELGYKEINYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
SDLIEKYLGTVVPAGDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
>Mature_480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKKWQKMEEPNWAELGYKEINYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
SDLIEKYLGTVVPAGDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=58.2463465553236, Blast_Score=596, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53300; Mature: 53300

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNENLVKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKK
CCCHHHHHHHHHCCHHCCCEECCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
WQKMEEPNWAELGYKEINYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHCCCCCHHHCCCEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHSDLIEKYLGTVVPAGDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHCCEECCCCCHHH
ALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHHCCHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure
MVNENLVKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKK
CCCHHHHHHHHHCCHHCCCEECCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
WQKMEEPNWAELGYKEINYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHCCCCCHHHCCCEECCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHSDLIEKYLGTVVPAGDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHCCEECCCCCHHH
ALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHHCCHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]