Click here to switch to the map view.

The map label for this gene is 78778446

Identifier: 78778446

GI number: 78778446

Start: 65918

End: 67183

Strand: Reverse

Name: 78778446

Synonym: PMT9312_0061

Alternate gene names: NA

Gene position: 67183-65918 (Counterclockwise)

Preceding gene: 78778448

Following gene: 78778441

Centisome position: 3.93

GC content: 28.75

Gene sequence:

>1266_bases
ATGAAAAAAAAATCAGTTGCAGTAGTTATAGTTTCTAATGGTCCTGGTGAATTAGCTACATGGGTAAATCCTCTAGTGGA
TGAGCTTAATAAAATAAATAAAACTCTATGTGATGACGATACACTCGATTTAACTCTTAGATTAGTTCTTGTTCCTTGCC
CAAATGCGACTGGTAAAGAATATTTAGTTGCAAATTCATGGAATAAATTCGAATTAATTACAAAATCCAAAAGTTTTTGG
AAATTATTAATAAAGCCAAGTTCTTTTGCTAATTGGCCAAAAAAAGGGGTAGTTATTTTCCTTGGTGGAGATCAATTTTG
GAGCATTTTACTAGCTAAAAGATTAGGTTATTTAAATATCACATATGCTGAATGGATTGCGCGATGGCCTCAATGGACTA
ACAAAATTGCTGCCATGAATTTAAAAGTAAAAGAGTTAATTCCTAAAAGATATAAATATAAATGTCAAATCATTGGCGAT
TTAATGGCAGATATCAAACTTAATAATGAAATATCATTAAAAAATAAAGAAAAACACTATATTGCATTGTTGCCTGGTTC
TAAAAAAGCAAAACTCTCTGTTGGAATTCCTTTCTTCTTAGAAATTGCAGATCATGTAGCTGAAGAAAATCAAAATATAA
ATTTTATAATTCCCATGGCTCCAACCACTAATAAAAGTGAATATTTATTTTTTCAAAGTGAGAACAATCCAATTGCGAAA
TATTACTCATCAAAAATTAAAAAAATTAAAAACATCAAAGACTCCTGGTTTGATTATGTAATTGAAACATCAAAAAATAC
AAAAATTTATCTAATTAAGAAACATCCTTGCTATGAAATATTGAAAGAATGTGATCTTGCGATTACAACTGTAGGAGCAA
ATACTGCAGAATTAGCAGCAATTGCTCTTCCAATGTTAGTTGTTCTACCAACTCAACATTTAAATATGATGAATGCCTGG
GATGGTATTTTTGGAGTAATCGGGAAAATTTCATTCATAAATAGATTCCTAACTTTTATAATTCAATATTTTTATGTTAA
AAAAAAGAAGTTTTTTGCTTGGCCAAATATTAAAGCTAAAAGAATGATTGTCCCTGAAAGGATAGGAAATATTTCGCCCA
GAAAAATTGCAAGAGAAGTATTATTTCTTATTAAAAATAGGGATCAATTAAAAAGTATTAGTAATAATTTACACAAAGAG
AGAGGCGATAAAGGTGCTGCTGAAAAACTTACTTCTATAATTGTTAATTCAATAAAAAAACTTTGA

Upstream 100 bases:

>100_bases
TGGCGGAATTGGTAGACGCGCACGTCTAAGGAGCGTGTGGCTTAGGCCTTGCGAGTTCAAGTCTCGCCGTCCGCATTTAA
TGTATTATGGTTAAACTGCA

Downstream 100 bases:

>100_bases
AAATTACCAAGGGTCATCAATTTCAAACTTTTCTGACTTTTTATTATCTTTAACTAAATTTTGTGCATCTAGTGGTTCAA
TATCCAAAGTTTCTTTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKKKSVAVVIVSNGPGELATWVNPLVDELNKINKTLCDDDTLDLTLRLVLVPCPNATGKEYLVANSWNKFELITKSKSFW
KLLIKPSSFANWPKKGVVIFLGGDQFWSILLAKRLGYLNITYAEWIARWPQWTNKIAAMNLKVKELIPKRYKYKCQIIGD
LMADIKLNNEISLKNKEKHYIALLPGSKKAKLSVGIPFFLEIADHVAEENQNINFIIPMAPTTNKSEYLFFQSENNPIAK
YYSSKIKKIKNIKDSWFDYVIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAAIALPMLVVLPTQHLNMMNAW
DGIFGVIGKISFINRFLTFIIQYFYVKKKKFFAWPNIKAKRMIVPERIGNISPRKIAREVLFLIKNRDQLKSISNNLHKE
RGDKGAAEKLTSIIVNSIKKL

Sequences:

>Translated_421_residues
MKKKSVAVVIVSNGPGELATWVNPLVDELNKINKTLCDDDTLDLTLRLVLVPCPNATGKEYLVANSWNKFELITKSKSFW
KLLIKPSSFANWPKKGVVIFLGGDQFWSILLAKRLGYLNITYAEWIARWPQWTNKIAAMNLKVKELIPKRYKYKCQIIGD
LMADIKLNNEISLKNKEKHYIALLPGSKKAKLSVGIPFFLEIADHVAEENQNINFIIPMAPTTNKSEYLFFQSENNPIAK
YYSSKIKKIKNIKDSWFDYVIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAAIALPMLVVLPTQHLNMMNAW
DGIFGVIGKISFINRFLTFIIQYFYVKKKKFFAWPNIKAKRMIVPERIGNISPRKIAREVLFLIKNRDQLKSISNNLHKE
RGDKGAAEKLTSIIVNSIKKL
>Mature_421_residues
MKKKSVAVVIVSNGPGELATWVNPLVDELNKINKTLCDDDTLDLTLRLVLVPCPNATGKEYLVANSWNKFELITKSKSFW
KLLIKPSSFANWPKKGVVIFLGGDQFWSILLAKRLGYLNITYAEWIARWPQWTNKIAAMNLKVKELIPKRYKYKCQIIGD
LMADIKLNNEISLKNKEKHYIALLPGSKKAKLSVGIPFFLEIADHVAEENQNINFIIPMAPTTNKSEYLFFQSENNPIAK
YYSSKIKKIKNIKDSWFDYVIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAAIALPMLVVLPTQHLNMMNAW
DGIFGVIGKISFINRFLTFIIQYFYVKKKKFFAWPNIKAKRMIVPERIGNISPRKIAREVLFLIKNRDQLKSISNNLHKE
RGDKGAAEKLTSIIVNSIKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48203; Mature: 48203

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSVAVVIVSNGPGELATWVNPLVDELNKINKTLCDDDTLDLTLRLVLVPCPNATGKE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCC
YLVANSWNKFELITKSKSFWKLLIKPSSFANWPKKGVVIFLGGDQFWSILLAKRLGYLNI
EEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEE
TYAEWIARWPQWTNKIAAMNLKVKELIPKRYKYKCQIIGDLMADIKLNNEISLKNKEKHY
EHHHHHHHCHHHHCCEEEECEEHHHHCCHHHHHHHEEHHHHHHHEEECCEEEECCCCCEE
IALLPGSKKAKLSVGIPFFLEIADHVAEENQNINFIIPMAPTTNKSEYLFFQSENNPIAK
EEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCHHH
YYSSKIKKIKNIKDSWFDYVIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAA
HHHHHHHHHHCCHHHHHHHEEECCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHH
IALPMLVVLPTQHLNMMNAWDGIFGVIGKISFINRFLTFIIQYFYVKKKKFFAWPNIKAK
HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
RMIVPERIGNISPRKIAREVLFLIKNRDQLKSISNNLHKERGDKGAAEKLTSIIVNSIKK
EEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MKKKSVAVVIVSNGPGELATWVNPLVDELNKINKTLCDDDTLDLTLRLVLVPCPNATGKE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCC
YLVANSWNKFELITKSKSFWKLLIKPSSFANWPKKGVVIFLGGDQFWSILLAKRLGYLNI
EEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEE
TYAEWIARWPQWTNKIAAMNLKVKELIPKRYKYKCQIIGDLMADIKLNNEISLKNKEKHY
EHHHHHHHCHHHHCCEEEECEEHHHHCCHHHHHHHEEHHHHHHHEEECCEEEECCCCCEE
IALLPGSKKAKLSVGIPFFLEIADHVAEENQNINFIIPMAPTTNKSEYLFFQSENNPIAK
EEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCHHH
YYSSKIKKIKNIKDSWFDYVIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAA
HHHHHHHHHHCCHHHHHHHEEECCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHH
IALPMLVVLPTQHLNMMNAWDGIFGVIGKISFINRFLTFIIQYFYVKKKKFFAWPNIKAK
HHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
RMIVPERIGNISPRKIAREVLFLIKNRDQLKSISNNLHKERGDKGAAEKLTSIIVNSIKK
EEECHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA