BacMap

Definition	Prochlorococcus marinus str. MIT 9312, complete genome.
Accession	NC_007577
Length	1,709,204

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The map label for this gene is dnaJ [H]

Identifier: 78778402

GI number: 78778402

Start: 19087

End: 20211

Strand: Direct

Name: dnaJ [H]

Synonym: PMT9312_0017

Alternate gene names: 78778402

Gene position: 19087-20211 (Clockwise)

Preceding gene: 78778401

Following gene: 78778403

Centisome position: 1.12

GC content: 38.13

Gene sequence:

>1125_bases
ATGGCTGATTTTTACCAAATACTTGGAGTTTCTCGAGATGCTGATGCGGATACCTTAAAAAGGGCTTATAGAAAATTAGC
AAGACAATATCATCCTGATGTTAATAAAGAACCTGGTGCTGAAGATAAATTTAAAGAAATTGGCAAGGCTTATGAAGCAT
TAGCTGATCCTGAAACTAGAGCTAGATATGATCAGTTTGGAGAGGCTGGCCTTGGAGGCGCAGCTGGAATGCCTGATATG
GGCGATATGGGTGGTTTTGCAGATTTATTTGAAACCTTTTTTAATGGCTTTGGAGGGCAAACTCCTCAAGGAGGAAGAAC
TCAAAGAAGAGGTCCTCAACAAGGAGATGATTTAAGATATGACCTTAATGTTGATTTTAAAGATGCAATATTTGGCCAAC
AAAGAGAAATTACAATTCCTCATCTTGAGACCTGTGAAGTCTGTAGGGGAACAGGTGCCAAACCAGGAACCGGACCAAAA
ACTTGCTCAACTTGTGGAGGAAGTGGACAAGTTAGAAGAGCTACGAGAACACCATTTGGTAATTTCACACAAGTAGCTGA
ATGTCCTTCATGTAATGGAGCTGGGCAAATAATCGCAGATCCATGTACAAGTTGCGGTGGTAATGGAGTAAAGCAAGTCA
GAAAAAAATTACGAATTAATATTCCTGCAGGAGTTGATACTGGTACTAAATTAAGAGTTTCCGGAGAGGGAAATGTTGGT
TTGAAAGGAGGCCCTCCTGGAGATCTTTATGTTTTTATCAAGGTTAAGAATGATTCAAAATTGAAAAGAGATGGTGTTAC
TATTTACTCAGAAATAGCTGTGAGTTATTTACAGGCTATTTTAGGAGATACAGTTGAAATCACTACAGTTGATGGCAATG
TTAATTTAAAAATTCCCAGTGGTACGCAACCAAATACAACTCTTTCACTTGAGAATAAAGGGGTACCGAGACTTGGTAAT
CCAGTTGCCAGAGGAAATCATGAAGTATTAGTAAAGGTAAAATTGCCAACTCGCATAACTGACGAAGAACGAGAGCTTTT
AGAAGGTTTAGCTTCTCAATATTCAGATAAAAATATCAATTCGAGTAGTGGACTATTTAGTAAATTATTTGGTAAAGAAT
CGTAA

Upstream 100 bases:

>100_bases
AAGAGGAAGTAGAAAAGGATACAGTTGAAGAGGATATTGATTCAGAGGAAAATACTTCTGAAGATGTATAAATTCCTAAT
TTTTACTTGAGCATTATCTA

Downstream 100 bases:

>100_bases
TGACTTCTTTAAAGTATTTGGATCTTAAATCTGTTCCATGTCCTTTAAATGTCGTCAAAATTAAATTGGCTTTAGAGAAG
TTATCCAAAAATGAACAACT

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MADFYQILGVSRDADADTLKRAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDM
GDMGGFADLFETFFNGFGGQTPQGGRTQRRGPQQGDDLRYDLNVDFKDAIFGQQREITIPHLETCEVCRGTGAKPGTGPK
TCSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCTSCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVEITTVDGNVNLKIPSGTQPNTTLSLENKGVPRLGN
PVARGNHEVLVKVKLPTRITDEERELLEGLASQYSDKNINSSSGLFSKLFGKES

Sequences:

>Translated_374_residues
MADFYQILGVSRDADADTLKRAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDM
GDMGGFADLFETFFNGFGGQTPQGGRTQRRGPQQGDDLRYDLNVDFKDAIFGQQREITIPHLETCEVCRGTGAKPGTGPK
TCSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCTSCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVEITTVDGNVNLKIPSGTQPNTTLSLENKGVPRLGN
PVARGNHEVLVKVKLPTRITDEERELLEGLASQYSDKNINSSSGLFSKLFGKES
>Mature_373_residues
ADFYQILGVSRDADADTLKRAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDMG
DMGGFADLFETFFNGFGGQTPQGGRTQRRGPQQGDDLRYDLNVDFKDAIFGQQREITIPHLETCEVCRGTGAKPGTGPKT
CSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCTSCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVGL
KGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVEITTVDGNVNLKIPSGTQPNTTLSLENKGVPRLGNP
VARGNHEVLVKVKLPTRITDEERELLEGLASQYSDKNINSSSGLFSKLFGKES

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=360, Percent_Identity=34.4444444444444, Blast_Score=212, Evalue=4e-55,
Organism=Homo sapiens, GI205360840, Length=360, Percent_Identity=34.4444444444444, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI5031741, Length=340, Percent_Identity=32.3529411764706, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI4504511, Length=358, Percent_Identity=30.7262569832402, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI194328758, Length=294, Percent_Identity=31.6326530612245, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI194328760, Length=329, Percent_Identity=30.3951367781155, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI7706495, Length=361, Percent_Identity=30.7479224376731, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI194328762, Length=290, Percent_Identity=27.9310344827586, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=59.4202898550725, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=59.4202898550725, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=59.4202898550725, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=60.2941176470588, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI194306642, Length=101, Percent_Identity=48.5148514851485, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI194306640, Length=101, Percent_Identity=48.5148514851485, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI6631085, Length=69, Percent_Identity=56.5217391304348, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI5453690, Length=66, Percent_Identity=57.5757575757576, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=44.0366972477064, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI9558755, Length=112, Percent_Identity=41.0714285714286, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI47777312, Length=109, Percent_Identity=43.1192660550459, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI27151736, Length=112, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI88501736, Length=112, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI72534740, Length=65, Percent_Identity=53.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI39204547, Length=158, Percent_Identity=31.0126582278481, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI21553335, Length=102, Percent_Identity=40.1960784313725, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=46.5753424657534, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=48.5294117647059, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI68077168, Length=75, Percent_Identity=50.6666666666667, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI68077166, Length=75, Percent_Identity=50.6666666666667, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=48.5294117647059, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=47.8260869565217, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI24308127, Length=75, Percent_Identity=44, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI23503241, Length=106, Percent_Identity=39.622641509434, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI21361912, Length=69, Percent_Identity=46.3768115942029, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI29126218, Length=77, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1786197, Length=354, Percent_Identity=41.5254237288136, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1787235, Length=357, Percent_Identity=27.1708683473389, Blast_Score=126, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17553098, Length=355, Percent_Identity=30.9859154929577, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17553096, Length=355, Percent_Identity=31.830985915493, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17507263, Length=345, Percent_Identity=31.8840579710145, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI212645553, Length=356, Percent_Identity=28.0898876404494, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17563890, Length=366, Percent_Identity=28.6885245901639, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17534355, Length=179, Percent_Identity=36.8715083798883, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI115532378, Length=70, Percent_Identity=54.2857142857143, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=50.7692307692308, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17554644, Length=101, Percent_Identity=39.6039603960396, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86562985, Length=70, Percent_Identity=41.4285714285714, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17538236, Length=110, Percent_Identity=34.5454545454545, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17568643, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=352, Percent_Identity=34.375, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321094, Length=400, Percent_Identity=33.5, Blast_Score=148, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6323119, Length=381, Percent_Identity=29.1338582677165, Blast_Score=125, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6323870, Length=309, Percent_Identity=31.7152103559871, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6324252, Length=436, Percent_Identity=25, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323813, Length=111, Percent_Identity=42.3423423423423, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322194, Length=98, Percent_Identity=39.7959183673469, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6320888, Length=98, Percent_Identity=38.7755102040816, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=51.5625, Blast_Score=66, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45552813, Length=378, Percent_Identity=30.1587301587302, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI45549272, Length=378, Percent_Identity=30.1587301587302, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI45552811, Length=378, Percent_Identity=30.1587301587302, Blast_Score=155, Evalue=3e-38,
Organism=Drosophila melanogaster, GI20129487, Length=341, Percent_Identity=31.0850439882698, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24584014, Length=341, Percent_Identity=31.0850439882698, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24646562, Length=347, Percent_Identity=31.4121037463977, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24646560, Length=347, Percent_Identity=31.4121037463977, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24646558, Length=347, Percent_Identity=31.4121037463977, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24646556, Length=347, Percent_Identity=31.4121037463977, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI21357547, Length=347, Percent_Identity=31.4121037463977, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI28574949, Length=362, Percent_Identity=27.0718232044199, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19920464, Length=360, Percent_Identity=28.0555555555556, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI85726398, Length=373, Percent_Identity=27.6139410187668, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24658562, Length=69, Percent_Identity=57.9710144927536, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24658555, Length=69, Percent_Identity=57.9710144927536, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI18858081, Length=353, Percent_Identity=26.628895184136, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24654066, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24654070, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24654068, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24654072, Length=121, Percent_Identity=37.1900826446281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=50.7692307692308, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737735, Length=69, Percent_Identity=46.3768115942029, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19922238, Length=73, Percent_Identity=43.8356164383562, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574723, Length=69, Percent_Identity=46.3768115942029, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24668523, Length=69, Percent_Identity=46.3768115942029, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17648033, Length=103, Percent_Identity=37.8640776699029, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24584630, Length=103, Percent_Identity=37.8640776699029, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 40150; Mature: 40018

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFYQILGVSRDADADTLKRAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETR
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARYDQFGEAGLGGAAGMPDMGDMGGFADLFETFFNGFGGQTPQGGRTQRRGPQQGDDLRY
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
DLNVDFKDAIFGQQREITIPHLETCEVCRGTGAKPGTGPKTCSTCGGSGQVRRATRTPFG
EECCCHHHHHCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEHHHCCCCC
NFTQVAECPSCNGAGQIIADPCTSCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
CCHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEECCCCCCC
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVEITTVDGNVNLKIPS
CCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECC
GTQPNTTLSLENKGVPRLGNPVARGNHEVLVKVKLPTRITDEERELLEGLASQYSDKNIN
CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
SSSGLFSKLFGKES
CCCHHHHHHHCCCC
>Mature Secondary Structure 
ADFYQILGVSRDADADTLKRAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETR
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARYDQFGEAGLGGAAGMPDMGDMGGFADLFETFFNGFGGQTPQGGRTQRRGPQQGDDLRY
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
DLNVDFKDAIFGQQREITIPHLETCEVCRGTGAKPGTGPKTCSTCGGSGQVRRATRTPFG
EECCCHHHHHCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEHHHCCCCC
NFTQVAECPSCNGAGQIIADPCTSCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
CCHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEECCCCCCC
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVEITTVDGNVNLKIPS
CCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECC
GTQPNTTLSLENKGVPRLGNPVARGNHEVLVKVKLPTRITDEERELLEGLASQYSDKNIN
CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
SSSGLFSKLFGKES
CCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]