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The map label for this gene is ynfJ [C]

Identifier: 78358543

GI number: 78358543

Start: 3462488

End: 3464296

Strand: Reverse

Name: ynfJ [C]

Synonym: Dde_3504

Alternate gene names: 78358543

Gene position: 3464296-3462488 (Counterclockwise)

Preceding gene: 78358544

Following gene: 78358538

Centisome position: 92.87

GC content: 56.77

Gene sequence:

>1809_bases
ATGTTTCGCCCTTTTGTCCGTTTGTGGGAAGAATACCTGCGGCTGTACCGTAATGTGACCTATGTGCGCATGCTTGTGCT
GGGCGTGGTGCTGGGGGTTGTCTCGGGCATAGCGGCTACGCTGTTTTTTCTCGGCATAGAGTATTTCAAGCACCTCATTC
AGGCCGTCTGGGCCGGCTACAGCCTGCCGGCACCGGCTGGCGAAGCGCTGTTTCACGGACATGCGGGCGAAACATTCCGG
CCGTGGGTCATTCCTCTGGCCACCACCACCGTGGCGCTGGTCACCGGCTGGCTGGTCAGCCGCTTTCTGCCGGACAGCTT
TCACGGCATGACCGACGGCACGGACTCCATGATCAGGGCTTTTCACCGGCAAAAAGGCGTTATCCGTCCTGTGGCCCCGC
TCATCAAGGGCATTACCTCCATTTTCACCATTGCGTCCGGGGGCAGTGCAGGACGCGAAGGGCCCATATCGCAGATAGGG
GCCGGTATCGGGTCTTTTTTTGCCGACAAAATGGGCCTGAGCACCAAAGAGCGCCGCATACTGATGCTGACAGGCGCCGC
GGGCGGACTGGGTGCCGTCTTTCGTGCGCCGCTGGGCGGGGCGTTGACTGCCGTGGAAGTTATCTACAAGGAAGACTTTG
AATCCGAAGCCATTCTGCCTGCGGTGACCTCATCGGTGGTATCGTATTCCATTTTTACGCTGGTGTTCGGTACCGAACCT
ATTTTCGGCATACCGGAGTTCAGCTTCAACAGCATGAGCGAACTGCCGTTCTACCTGATTCTTTCGCTGGTCTGCGCCGC
TGCGGGCTGGCTGTATGTAAGCACGTTCCGGTTCATCAAATATTCCGTGTTTGCCCGTATGCAGCAGAAGGTGGGCATCA
TGTGGACCATGGCGGCCGGAGGGCTTTTAATGGGGCTTTTCGGCATGCTGTACCCCAAGGTGCTTTCGGGCGGCTACGGC
TGGCTTGAACAGGCCATTCTGGGACAGATGACCGTTGCCACCATGGTGACCATCATACTGGCAAAAACGCTTGCCACATC
GGTCACGCTCGGTTCGGGCATGAGCGGCGGCATGTTTGCGCCGGCTCTGTTCGTGGGAGGGATGAGCGGCGGCATTGTGG
GCTTTACCGCGCATAAATATTACCCCGATATAGTAACGCAGCCGGGCGGGTATGTGCTGGTGGGCATGGCGGCCTTTTTT
GCCGGTGTGGCCAACGCACCCATCGGCCCGCTGATAATGGTGTGCGAACTGACACAGGGCTACGGTATGCTGGCGCCGCT
TATGCTGGCCTCTGCCGTGTGCATTGTGCTGGGCAGGCGCAGCAACCTGTACGAAAATCAGGTGGAGAACAAATTCGAGT
CACCCGCCCATATCAATGATGCCACCATCAACCTGCTGGAACAGCTGAAGGTGACTGACCACTTTGAACGCGGCAGAGTG
ACCATTCTGGAGGAAAGCGTCACCCTCAAAGGCCTGACGGACATTATTTCCGGCACCAATGAATTTTTCTTTCCCGTCAA
AAGCGAAGAGGGAGAAATCACCGGTATCCTTTCCATAAATGACGTGCGCAGCCTGCTGTATGAAGAGAGCCTTTTTGATC
TGGTGCTGGTGAAAGACCTTGCGCGCAAGCCTGCCACACTGGAGGAGGAAGATGATCTGTACACGGCGCTGCTCAAGTTT
GTGGATACGGATCTCGGCCAGATTCCTGTGGTGGACGCGGACGATCATAATACCATTCTGGGACTCATCAACCGCTCGGA
CGTGTTCCACGCTTATACCAAGACATTGCAGAAACTGCGTGAAGACTGA

Upstream 100 bases:

>100_bases
CCGCGCGGCGTGGCGGTGTTTGCACCGTGCAAAAGCGGGGCGGCAGTTATCTGCCGTCATAACCACGCGGCGCTGTTGCC
GTAACGGAGTTTCACCTCTC

Downstream 100 bases:

>100_bases
TGTCTTGTTCCGCGATGACAAAGCCCCGATGACAAACCCCCCGTCTGCATATGCTGACGGGGGTTTTTTATGCCGGATGC
TGCATGCTGAAAAACAGGCA

Product: chloride channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MFRPFVRLWEEYLRLYRNVTYVRMLVLGVVLGVVSGIAATLFFLGIEYFKHLIQAVWAGYSLPAPAGEALFHGHAGETFR
PWVIPLATTTVALVTGWLVSRFLPDSFHGMTDGTDSMIRAFHRQKGVIRPVAPLIKGITSIFTIASGGSAGREGPISQIG
AGIGSFFADKMGLSTKERRILMLTGAAGGLGAVFRAPLGGALTAVEVIYKEDFESEAILPAVTSSVVSYSIFTLVFGTEP
IFGIPEFSFNSMSELPFYLILSLVCAAAGWLYVSTFRFIKYSVFARMQQKVGIMWTMAAGGLLMGLFGMLYPKVLSGGYG
WLEQAILGQMTVATMVTIILAKTLATSVTLGSGMSGGMFAPALFVGGMSGGIVGFTAHKYYPDIVTQPGGYVLVGMAAFF
AGVANAPIGPLIMVCELTQGYGMLAPLMLASAVCIVLGRRSNLYENQVENKFESPAHINDATINLLEQLKVTDHFERGRV
TILEESVTLKGLTDIISGTNEFFFPVKSEEGEITGILSINDVRSLLYEESLFDLVLVKDLARKPATLEEEDDLYTALLKF
VDTDLGQIPVVDADDHNTILGLINRSDVFHAYTKTLQKLRED

Sequences:

>Translated_602_residues
MFRPFVRLWEEYLRLYRNVTYVRMLVLGVVLGVVSGIAATLFFLGIEYFKHLIQAVWAGYSLPAPAGEALFHGHAGETFR
PWVIPLATTTVALVTGWLVSRFLPDSFHGMTDGTDSMIRAFHRQKGVIRPVAPLIKGITSIFTIASGGSAGREGPISQIG
AGIGSFFADKMGLSTKERRILMLTGAAGGLGAVFRAPLGGALTAVEVIYKEDFESEAILPAVTSSVVSYSIFTLVFGTEP
IFGIPEFSFNSMSELPFYLILSLVCAAAGWLYVSTFRFIKYSVFARMQQKVGIMWTMAAGGLLMGLFGMLYPKVLSGGYG
WLEQAILGQMTVATMVTIILAKTLATSVTLGSGMSGGMFAPALFVGGMSGGIVGFTAHKYYPDIVTQPGGYVLVGMAAFF
AGVANAPIGPLIMVCELTQGYGMLAPLMLASAVCIVLGRRSNLYENQVENKFESPAHINDATINLLEQLKVTDHFERGRV
TILEESVTLKGLTDIISGTNEFFFPVKSEEGEITGILSINDVRSLLYEESLFDLVLVKDLARKPATLEEEDDLYTALLKF
VDTDLGQIPVVDADDHNTILGLINRSDVFHAYTKTLQKLRED
>Mature_602_residues
MFRPFVRLWEEYLRLYRNVTYVRMLVLGVVLGVVSGIAATLFFLGIEYFKHLIQAVWAGYSLPAPAGEALFHGHAGETFR
PWVIPLATTTVALVTGWLVSRFLPDSFHGMTDGTDSMIRAFHRQKGVIRPVAPLIKGITSIFTIASGGSAGREGPISQIG
AGIGSFFADKMGLSTKERRILMLTGAAGGLGAVFRAPLGGALTAVEVIYKEDFESEAILPAVTSSVVSYSIFTLVFGTEP
IFGIPEFSFNSMSELPFYLILSLVCAAAGWLYVSTFRFIKYSVFARMQQKVGIMWTMAAGGLLMGLFGMLYPKVLSGGYG
WLEQAILGQMTVATMVTIILAKTLATSVTLGSGMSGGMFAPALFVGGMSGGIVGFTAHKYYPDIVTQPGGYVLVGMAAFF
AGVANAPIGPLIMVCELTQGYGMLAPLMLASAVCIVLGRRSNLYENQVENKFESPAHINDATINLLEQLKVTDHFERGRV
TILEESVTLKGLTDIISGTNEFFFPVKSEEGEITGILSINDVRSLLYEESLFDLVLVKDLARKPATLEEEDDLYTALLKF
VDTDLGQIPVVDADDHNTILGLINRSDVFHAYTKTLQKLRED

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=362, Percent_Identity=27.0718232044199, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI1786350, Length=417, Percent_Identity=26.378896882494, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 65341; Mature: 65341

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure
MFRPFVRLWEEYLRLYRNVTYVRMLVLGVVLGVVSGIAATLFFLGIEYFKHLIQAVWAGY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLPAPAGEALFHGHAGETFRPWVIPLATTTVALVTGWLVSRFLPDSFHGMTDGTDSMIRA
CCCCCCCCHHEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
FHRQKGVIRPVAPLIKGITSIFTIASGGSAGREGPISQIGAGIGSFFADKMGLSTKERRI
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
LMLTGAAGGLGAVFRAPLGGALTAVEVIYKEDFESEAILPAVTSSVVSYSIFTLVFGTEP
EEEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
IFGIPEFSFNSMSELPFYLILSLVCAAAGWLYVSTFRFIKYSVFARMQQKVGIMWTMAAG
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHH
GLLMGLFGMLYPKVLSGGYGWLEQAILGQMTVATMVTIILAKTLATSVTLGSGMSGGMFA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
PALFVGGMSGGIVGFTAHKYYPDIVTQPGGYVLVGMAAFFAGVANAPIGPLIMVCELTQG
HHHHHCCCCCCEEEEEHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHEEEEHHCC
YGMLAPLMLASAVCIVLGRRSNLYENQVENKFESPAHINDATINLLEQLKVTDHFERGRV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
TILEESVTLKGLTDIISGTNEFFFPVKSEEGEITGILSINDVRSLLYEESLFDLVLVKDL
EEEECCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
ARKPATLEEEDDLYTALLKFVDTDLGQIPVVDADDHNTILGLINRSDVFHAYTKTLQKLR
HCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHH
ED
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]