| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358480
Identifier: 78358480
GI number: 78358480
Start: 3402849
End: 3403610
Strand: Reverse
Name: 78358480
Synonym: Dde_3441
Alternate gene names: NA
Gene position: 3403610-3402849 (Counterclockwise)
Preceding gene: 78358481
Following gene: 78358476
Centisome position: 91.24
GC content: 44.23
Gene sequence:
>762_bases ATGCGCGACTTATATATCTCTGAGCACAACGCTGCCCTGCTGGAACGGGTTACACGCAAAAAGCAGGAACTAGACAAAAG AAGGCCTCTCACTCAGGGAGAGCTAGAGCGCTTGCAGGAGGATTTTCTTGTAGAGTTCACCTACAATTCTAACGCCATAG AAGGATGCACGCTGACACTGCGAGAAACAGCTCTGGTGCTGCAAGGCATAACCATAGATAAAAAGCCGCTGAAAGATCAC CTGGAGGCTGTAGGACATCGCGATGCTTTTGTGTATGTTCTTGATATCGCCAAAAATAATGTTTCAATCACGCAATCTAC CATCAAAGACATTCATGCCCTTGTGTTGATCAACAGGCCAGCAGATAAAGGGGTGTATAGAAAAATTCCTGTACGCATTA TGGGCGCTATTGCTCAGCCAGAGCCTCCGTATCACATAGAAGAAAAATTGCGTGAATTCCTTGCTGAAAATGATGCCGCA TCACACAGCATGCATCCTGTTGTGCGCATTGCGTTATTTCATCTTATCTTCGGAGGTATTCATCCCTTTATCGATGGAAA CGGACGCATAGGGAGATTGCTTCTCAATCTTGATTTGATTCAGTGTGGATTTCCACCAGTCAATATCAAGTTTACAGATC GCCAACGCTACTATGATGCTTTTGATAGCTACTATCGAGATGGGGATGCGAATGCAATGATTGCGCTCATAGCAGAATCT CTTGAAGAACGTTTAGATGTATATCTATCATTTGCGGAATAA
Upstream 100 bases:
>100_bases AGTTTGATACTTTCAGGCAAAGGGCGTATCTTAAGTATGGTCAAAGGTGGTTTGACTGAGAAAGACTGTGAACTCTGGCG AAAACAGTGAGAATGGAAGC
Downstream 100 bases:
>100_bases TCTGAAACACTCGTTTCTACTCCACGTACATGCAGAATACTGTTAATAATCAGCAATAGAATTCCTTCTCTTCTGTGCAT TTTTTGATCTGTGATAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES LEERLDVYLSFAE
Sequences:
>Translated_253_residues MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES LEERLDVYLSFAE >Mature_253_residues MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES LEERLDVYLSFAE
Specific function: Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins [H]
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Homo sapiens, GI42794620, Length=225, Percent_Identity=34.6666666666667, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17544594, Length=220, Percent_Identity=30.9090909090909, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24582217, Length=240, Percent_Identity=32.9166666666667, Blast_Score=110, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 - InterPro: IPR010093 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 28915; Mature: 28915
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTL CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEHH RETALVLQGITIDKKPLKDHLEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRP HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHHEEEEEECC ADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAASHSMHPVVRIALFHLIFGGI CCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC HPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES CCCCCCCCCEEEEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH LEERLDVYLSFAE HHHHHHHHEEECC >Mature Secondary Structure MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTL CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEHH RETALVLQGITIDKKPLKDHLEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRP HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHHEEEEEECC ADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAASHSMHPVVRIALFHLIFGGI CCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC HPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES CCCCCCCCCEEEEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH LEERLDVYLSFAE HHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]