Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358480

Identifier: 78358480

GI number: 78358480

Start: 3402849

End: 3403610

Strand: Reverse

Name: 78358480

Synonym: Dde_3441

Alternate gene names: NA

Gene position: 3403610-3402849 (Counterclockwise)

Preceding gene: 78358481

Following gene: 78358476

Centisome position: 91.24

GC content: 44.23

Gene sequence:

>762_bases
ATGCGCGACTTATATATCTCTGAGCACAACGCTGCCCTGCTGGAACGGGTTACACGCAAAAAGCAGGAACTAGACAAAAG
AAGGCCTCTCACTCAGGGAGAGCTAGAGCGCTTGCAGGAGGATTTTCTTGTAGAGTTCACCTACAATTCTAACGCCATAG
AAGGATGCACGCTGACACTGCGAGAAACAGCTCTGGTGCTGCAAGGCATAACCATAGATAAAAAGCCGCTGAAAGATCAC
CTGGAGGCTGTAGGACATCGCGATGCTTTTGTGTATGTTCTTGATATCGCCAAAAATAATGTTTCAATCACGCAATCTAC
CATCAAAGACATTCATGCCCTTGTGTTGATCAACAGGCCAGCAGATAAAGGGGTGTATAGAAAAATTCCTGTACGCATTA
TGGGCGCTATTGCTCAGCCAGAGCCTCCGTATCACATAGAAGAAAAATTGCGTGAATTCCTTGCTGAAAATGATGCCGCA
TCACACAGCATGCATCCTGTTGTGCGCATTGCGTTATTTCATCTTATCTTCGGAGGTATTCATCCCTTTATCGATGGAAA
CGGACGCATAGGGAGATTGCTTCTCAATCTTGATTTGATTCAGTGTGGATTTCCACCAGTCAATATCAAGTTTACAGATC
GCCAACGCTACTATGATGCTTTTGATAGCTACTATCGAGATGGGGATGCGAATGCAATGATTGCGCTCATAGCAGAATCT
CTTGAAGAACGTTTAGATGTATATCTATCATTTGCGGAATAA

Upstream 100 bases:

>100_bases
AGTTTGATACTTTCAGGCAAAGGGCGTATCTTAAGTATGGTCAAAGGTGGTTTGACTGAGAAAGACTGTGAACTCTGGCG
AAAACAGTGAGAATGGAAGC

Downstream 100 bases:

>100_bases
TCTGAAACACTCGTTTCTACTCCACGTACATGCAGAATACTGTTAATAATCAGCAATAGAATTCCTTCTCTTCTGTGCAT
TTTTTGATCTGTGATAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH
LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA
SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES
LEERLDVYLSFAE

Sequences:

>Translated_253_residues
MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH
LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA
SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES
LEERLDVYLSFAE
>Mature_253_residues
MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTLRETALVLQGITIDKKPLKDH
LEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRPADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAA
SHSMHPVVRIALFHLIFGGIHPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES
LEERLDVYLSFAE

Specific function: Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins [H]

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fido domain [H]

Homologues:

Organism=Homo sapiens, GI42794620, Length=225, Percent_Identity=34.6666666666667, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17544594, Length=220, Percent_Identity=30.9090909090909, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24582217, Length=240, Percent_Identity=32.9166666666667, Blast_Score=110, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003812
- InterPro:   IPR010093 [H]

Pfam domain/function: PF02661 Fic [H]

EC number: NA

Molecular weight: Translated: 28915; Mature: 28915

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTL
CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEHH
RETALVLQGITIDKKPLKDHLEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRP
HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHHEEEEEECC
ADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAASHSMHPVVRIALFHLIFGGI
CCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
HPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES
CCCCCCCCCEEEEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
LEERLDVYLSFAE
HHHHHHHHEEECC
>Mature Secondary Structure
MRDLYISEHNAALLERVTRKKQELDKRRPLTQGELERLQEDFLVEFTYNSNAIEGCTLTL
CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEHH
RETALVLQGITIDKKPLKDHLEAVGHRDAFVYVLDIAKNNVSITQSTIKDIHALVLINRP
HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHHEEEEEECC
ADKGVYRKIPVRIMGAIAQPEPPYHIEEKLREFLAENDAASHSMHPVVRIALFHLIFGGI
CCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
HPFIDGNGRIGRLLLNLDLIQCGFPPVNIKFTDRQRYYDAFDSYYRDGDANAMIALIAES
CCCCCCCCCEEEEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
LEERLDVYLSFAE
HHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]