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The map label for this gene is 78358446

Identifier: 78358446

GI number: 78358446

Start: 3369405

End: 3370433

Strand: Reverse

Name: 78358446

Synonym: Dde_3407

Alternate gene names: NA

Gene position: 3370433-3369405 (Counterclockwise)

Preceding gene: 304570598

Following gene: 78358445

Centisome position: 90.35

GC content: 55.59

Gene sequence:

>1029_bases
ATGCTTACCAAGGAAGGAGTCATGGAAATTCGAATTTTGCGGCGGCAGGGAAAGTCGATCAGGTGGATCGCCAGAGAACT
TGAAATTTCACGCAATACGGTTCGTAAATACCTGCGCGATTCAAGCGAGCCGATTTACGAGCGTCAGACGAAACAGCCCG
GAAAGCTCGATCCTTTCAAGGATTACATCGACGAACGGGTGCGGCAGGCTTCTCCACACAGGCTGCCTGCGACGGTTATC
TTTCGTGAGATTGTCGAGCAGGGATATGCGGGATCCGAGCGTCTTGTCCGATATTATGTCAGCGGTCTGTATCCTGTTCC
GGCTCCCGAGCCGGACAATCGGTTCGAGACGGCCCCCGGCATACAGATGCAGGTTGACTGGTGCGTATTTCGGAGAGGGA
AGGAACCGCTTTCTGCCTTTGTGGCTACTTTGGGCTTCAGCCGCCTTACGTATGTGGAGTTCGTCACGGACGAGACCTTT
GCCAGCCTTCGCAAGTGCCATGAGAATGCGTTTGCCTTTTTTCAGGGTATTCCCCAGGAAGTGCTGTACGACAACATGAA
AACGGTAGTTGTTGAGCGGGATGCCTATGGCTCCGGAAAACATCGCTTTCACTCCGCATTCCGGCAGTTGGCGACGGACT
ACGGCTTCACGCCCCGGCTTTGCAGGCCGTACAGGGCTCGGACAAAAGGCAAAGTCGAGCGTTTCAACCACTATCTGCGA
AACAGCTTTTATGTGCCCCTGGTGACAAAGCTCGCCAACTCCGGTCTGAAGCTGGACGCGCTGACTGCCAACCTTGAAGT
CGGCAAGTGGCTCCGGGAGGTGGCAAACTGCAGAAAGCACAAGACAACCGGGCAGCGCCCTGACAGGCGGTTCCTCGAGG
AGCGAGAGTCGCTTCTGCCGTTGCCGAAAACAATTCGGCAGGACTCTGCCTGCCTTCTGGATGGCACCGGCAAATTGGGA
ACATGGCCTGTCGAGATGCTTCAGCGTTCCCCAGCGTTTTATGACCGCTTCCTTCAGGGAGGTGCGTAG

Upstream 100 bases:

>100_bases
AACCCGCCACCCCTGTCAGCGGCAATGTAAAAATGACCCACCTCGGCAACTGAAAATTGACCCGCCTTGGAAGAACTGAT
GCCCTCCGTCAGGAGGCGCG

Downstream 100 bases:

>100_bases
TGGATAGCCTCCAGCACGAACGAATGGTTTCGGTCTGTGAAAAGCTCAAGCTATGCGCTGTGCCGAACTGCTATGACCAG
CTTGCGGAAGCGGCCGTCAG

Product: ISGsu6, transposase OrfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLTKEGVMEIRILRRQGKSIRWIARELEISRNTVRKYLRDSSEPIYERQTKQPGKLDPFKDYIDERVRQASPHRLPATVI
FREIVEQGYAGSERLVRYYVSGLYPVPAPEPDNRFETAPGIQMQVDWCVFRRGKEPLSAFVATLGFSRLTYVEFVTDETF
ASLRKCHENAFAFFQGIPQEVLYDNMKTVVVERDAYGSGKHRFHSAFRQLATDYGFTPRLCRPYRARTKGKVERFNHYLR
NSFYVPLVTKLANSGLKLDALTANLEVGKWLREVANCRKHKTTGQRPDRRFLEERESLLPLPKTIRQDSACLLDGTGKLG
TWPVEMLQRSPAFYDRFLQGGA

Sequences:

>Translated_342_residues
MLTKEGVMEIRILRRQGKSIRWIARELEISRNTVRKYLRDSSEPIYERQTKQPGKLDPFKDYIDERVRQASPHRLPATVI
FREIVEQGYAGSERLVRYYVSGLYPVPAPEPDNRFETAPGIQMQVDWCVFRRGKEPLSAFVATLGFSRLTYVEFVTDETF
ASLRKCHENAFAFFQGIPQEVLYDNMKTVVVERDAYGSGKHRFHSAFRQLATDYGFTPRLCRPYRARTKGKVERFNHYLR
NSFYVPLVTKLANSGLKLDALTANLEVGKWLREVANCRKHKTTGQRPDRRFLEERESLLPLPKTIRQDSACLLDGTGKLG
TWPVEMLQRSPAFYDRFLQGGA
>Mature_342_residues
MLTKEGVMEIRILRRQGKSIRWIARELEISRNTVRKYLRDSSEPIYERQTKQPGKLDPFKDYIDERVRQASPHRLPATVI
FREIVEQGYAGSERLVRYYVSGLYPVPAPEPDNRFETAPGIQMQVDWCVFRRGKEPLSAFVATLGFSRLTYVEFVTDETF
ASLRKCHENAFAFFQGIPQEVLYDNMKTVVVERDAYGSGKHRFHSAFRQLATDYGFTPRLCRPYRARTKGKVERFNHYLR
NSFYVPLVTKLANSGLKLDALTANLEVGKWLREVANCRKHKTTGQRPDRRFLEERESLLPLPKTIRQDSACLLDGTGKLG
TWPVEMLQRSPAFYDRFLQGGA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 39670; Mature: 39670

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKEGVMEIRILRRQGKSIRWIARELEISRNTVRKYLRDSSEPIYERQTKQPGKLDPFK
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHH
DYIDERVRQASPHRLPATVIFREIVEQGYAGSERLVRYYVSGLYPVPAPEPDNRFETAPG
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
IQMQVDWCVFRRGKEPLSAFVATLGFSRLTYVEFVTDETFASLRKCHENAFAFFQGIPQE
CEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLYDNMKTVVVERDAYGSGKHRFHSAFRQLATDYGFTPRLCRPYRARTKGKVERFNHYLR
HHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCHHHHHHHHHHH
NSFYVPLVTKLANSGLKLDALTANLEVGKWLREVANCRKHKTTGQRPDRRFLEERESLLP
CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LPKTIRQDSACLLDGTGKLGTWPVEMLQRSPAFYDRFLQGGA
CCHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MLTKEGVMEIRILRRQGKSIRWIARELEISRNTVRKYLRDSSEPIYERQTKQPGKLDPFK
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHH
DYIDERVRQASPHRLPATVIFREIVEQGYAGSERLVRYYVSGLYPVPAPEPDNRFETAPG
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
IQMQVDWCVFRRGKEPLSAFVATLGFSRLTYVEFVTDETFASLRKCHENAFAFFQGIPQE
CEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLYDNMKTVVVERDAYGSGKHRFHSAFRQLATDYGFTPRLCRPYRARTKGKVERFNHYLR
HHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCHHHHHHHHHHH
NSFYVPLVTKLANSGLKLDALTANLEVGKWLREVANCRKHKTTGQRPDRRFLEERESLLP
CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LPKTIRQDSACLLDGTGKLGTWPVEMLQRSPAFYDRFLQGGA
CCHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]