Click here to switch to the map view.

The map label for this gene is 78358405

Identifier: 78358405

GI number: 78358405

Start: 3336798

End: 3337064

Strand: Reverse

Name: 78358405

Synonym: Dde_3365

Alternate gene names: NA

Gene position: 3337064-3336798 (Counterclockwise)

Preceding gene: 78358440

Following gene: 78358404

Centisome position: 89.46

GC content: 44.19

Gene sequence:

>267_bases
ATGAAGAAATCGCGTTACACAGACAGTCAAATTTTAAATATTTTGAAGCAGGCCGAGAATGGCGTACCTATTCCGGAATT
ATGCAGAGAGCATGGAATGAGTAGCGCGACGTTTTATAAATGGCGGGCAAAATATGGCGGGATGGATGCATCGTTAATGG
CCCGCATGAAAGAGCTAGAGCGCGAAAATCGTCAGCTGAAGAAGATGTATGCTGAAGAACGCTTGAAGGCAGAGATTGTC
AAGGAAGCCCTTGAAAAAAAGTGGTAA

Upstream 100 bases:

>100_bases
ATCTCCAAATCCAACAAGCATGGCGTAGCGGTAATCCCCCCGAAAAATGATGCTTCTGAAAAGTAGAATTTTCTCATAAA
CTCTATTGAGGAGATTCGTC

Downstream 100 bases:

>100_bases
AGCCGTCTTGTCGCCGCAAGATGGCAAAGGCAGCCGTGAACGAGAGAAAGGTCAGTATCCGACTGGCGTGTGTTGCGTTT
TCCATAAGCCAGACGTGCTA

Product: ISSod2, transposase OrfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKKSRYTDSQILNILKQAENGVPIPELCREHGMSSATFYKWRAKYGGMDASLMARMKELERENRQLKKMYAEERLKAEIV
KEALEKKW

Sequences:

>Translated_88_residues
MKKSRYTDSQILNILKQAENGVPIPELCREHGMSSATFYKWRAKYGGMDASLMARMKELERENRQLKKMYAEERLKAEIV
KEALEKKW
>Mature_88_residues
MKKSRYTDSQILNILKQAENGVPIPELCREHGMSSATFYKWRAKYGGMDASLMARMKELERENRQLKKMYAEERLKAEIV
KEALEKKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10411; Mature: 10411

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSRYTDSQILNILKQAENGVPIPELCREHGMSSATFYKWRAKYGGMDASLMARMKELE
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RENRQLKKMYAEERLKAEIVKEALEKKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSRYTDSQILNILKQAENGVPIPELCREHGMSSATFYKWRAKYGGMDASLMARMKELE
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RENRQLKKMYAEERLKAEIVKEALEKKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]