| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is adh1 [H]
Identifier: 78358307
GI number: 78358307
Start: 3262827
End: 3263936
Strand: Reverse
Name: adh1 [H]
Synonym: Dde_3267
Alternate gene names: 78358307
Gene position: 3263936-3262827 (Counterclockwise)
Preceding gene: 78358308
Following gene: 78358306
Centisome position: 87.5
GC content: 56.4
Gene sequence:
>1110_bases GTGACACAGTTCTACGGAAAAACAAAAATCTGCTATGGCGAAGATGCCCTTGAGACCCTTGAGCGCCTTCCCATCAAGCA GGCGTTCATCGTCACCGATCCGTTCATGGTGAAGACCGGTTTCATCGACAGGCTCATAAGTCATCTTGATCTGGGCGGCA TCCGTCACCGCGTGTTTGACGGTGTGGAGCCGGATCCTTCGCTGGAAACAGTCACCAAAGGTACCCACCTGTACATGCAG GATCATGCCGAAGCTGTCATAGCGCTCGGCGGCGGTTCTGCCATCGACGCGGCCAAGGCCATAGCCTTTTTTGCCAGCAA GGTTGATACCTCGCGGCCGCGGCCCATTCTGGTGGCCATTCCCACCACCAGCGGCACCGGGTCTGAAGTCACGGCCATAT CGGTTGTGACGGACAAGGTGAACGAGGTGAAGATTCCGCTCAATGACGAACAGCTCATTCCCGATCTGGCCATCCTTGAT GCGCGGTTCACCCGTACGCTGCCCCCCTCGGTGACTTCCGTCACCGGTATGGATGTGCTGACGCATGCCATTGAAGCATA TACCTCGCGCAAGGCAAACGCGTTTACGTCCATCTACGCGGAATATGCCATCAGGTATGTTTTCGAATATCTGCCCCGCG CGTACCGCTGCAGCGACGATATGGAAGCCCGTGAGAAAATGCTGCTTGCCTCCTGCATGGCAGGTATGGCCTTCAACAAC AGCGGGCTGGGCATCACCCACAGCATAGCGCACAGCCTCGGCGGTATTTTTCATGTGCCGCACGGACTTGCCAATGCCGT GGTGCTGCCTTTCGTCATTCAGTTCAACAGCTTTGACGCTGCGGTGCAGTACCGCGAAATCGCACAGATGCTGTCTCTGC CTGCCGGTTCGGTGGGCGAGGGCACCCAGAGCCTTATCAAGGCCGTGCGCGAACTGAACGAATCCATGGGAATACCCAAC AGAATAGGTGCTCTTAAAATAGAAGAGAGTGCTTACCGCCAGCATGCCGATGTCATCGCCAGAAACGTGCTGGACGATAT ATGCACCGCAGGCAATCCGAGAATGCCTTCGCGGGCCGATATCAGAATGCTGCTGGAACAGGCATGGTAG
Upstream 100 bases:
>100_bases GCGCGGACAGCCGCAGACGGCACAGCCGCAGACGGCACGGCCGCAGTATGCCGCCGCAACATAACCAAATGCTCAACAAT CGTATATTAAGGGGGCAAGG
Downstream 100 bases:
>100_bases ACGCGGTGCCGTAAAGGTACCGCGGGCACAGATATACGCGCGTGTAGCTGTGTGACGACCGGAATCACGCAGACCATGAA AAGGGGAAGACGATGACTGG
Product: alcetaldehyde dehydrogenase or NADPH-dependent butanol dehydrogenase
Products: NA
Alternate protein names: BDH [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTQFYGKTKICYGEDALETLERLPIKQAFIVTDPFMVKTGFIDRLISHLDLGGIRHRVFDGVEPDPSLETVTKGTHLYMQ DHAEAVIALGGGSAIDAAKAIAFFASKVDTSRPRPILVAIPTTSGTGSEVTAISVVTDKVNEVKIPLNDEQLIPDLAILD ARFTRTLPPSVTSVTGMDVLTHAIEAYTSRKANAFTSIYAEYAIRYVFEYLPRAYRCSDDMEAREKMLLASCMAGMAFNN SGLGITHSIAHSLGGIFHVPHGLANAVVLPFVIQFNSFDAAVQYREIAQMLSLPAGSVGEGTQSLIKAVRELNESMGIPN RIGALKIEESAYRQHADVIARNVLDDICTAGNPRMPSRADIRMLLEQAW
Sequences:
>Translated_369_residues MTQFYGKTKICYGEDALETLERLPIKQAFIVTDPFMVKTGFIDRLISHLDLGGIRHRVFDGVEPDPSLETVTKGTHLYMQ DHAEAVIALGGGSAIDAAKAIAFFASKVDTSRPRPILVAIPTTSGTGSEVTAISVVTDKVNEVKIPLNDEQLIPDLAILD ARFTRTLPPSVTSVTGMDVLTHAIEAYTSRKANAFTSIYAEYAIRYVFEYLPRAYRCSDDMEAREKMLLASCMAGMAFNN SGLGITHSIAHSLGGIFHVPHGLANAVVLPFVIQFNSFDAAVQYREIAQMLSLPAGSVGEGTQSLIKAVRELNESMGIPN RIGALKIEESAYRQHADVIARNVLDDICTAGNPRMPSRADIRMLLEQAW >Mature_368_residues TQFYGKTKICYGEDALETLERLPIKQAFIVTDPFMVKTGFIDRLISHLDLGGIRHRVFDGVEPDPSLETVTKGTHLYMQD HAEAVIALGGGSAIDAAKAIAFFASKVDTSRPRPILVAIPTTSGTGSEVTAISVVTDKVNEVKIPLNDEQLIPDLAILDA RFTRTLPPSVTSVTGMDVLTHAIEAYTSRKANAFTSIYAEYAIRYVFEYLPRAYRCSDDMEAREKMLLASCMAGMAFNNS GLGITHSIAHSLGGIFHVPHGLANAVVLPFVIQFNSFDAAVQYREIAQMLSLPAGSVGEGTQSLIKAVRELNESMGIPNR IGALKIEESAYRQHADVIARNVLDDICTAGNPRMPSRADIRMLLEQAW
Specific function: This enzyme has activity using butanol and ethanol as substrates [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=320, Percent_Identity=29.0625, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI87082107, Length=347, Percent_Identity=38.6167146974063, Blast_Score=231, Evalue=7e-62, Organism=Escherichia coli, GI1787493, Length=379, Percent_Identity=36.6754617414248, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI48994951, Length=359, Percent_Identity=36.4902506963788, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI1789163, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1789386, Length=345, Percent_Identity=26.0869565217391, Blast_Score=106, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17537053, Length=402, Percent_Identity=25.3731343283582, Blast_Score=119, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6321181, Length=385, Percent_Identity=34.025974025974, Blast_Score=215, Evalue=7e-57, Organism=Drosophila melanogaster, GI24657991, Length=361, Percent_Identity=26.5927977839335, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: NA
Molecular weight: Translated: 40262; Mature: 40131
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFYGKTKICYGEDALETLERLPIKQAFIVTDPFMVKTGFIDRLISHLDLGGIRHRVFD CCCCCCCCEEEECCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHC GVEPDPSLETVTKGTHLYMQDHAEAVIALGGGSAIDAAKAIAFFASKVDTSRPRPILVAI CCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE PTTSGTGSEVTAISVVTDKVNEVKIPLNDEQLIPDLAILDARFTRTLPPSVTSVTGMDVL ECCCCCCCCEEEEEEEECCCCEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH THAIEAYTSRKANAFTSIYAEYAIRYVFEYLPRAYRCSDDMEAREKMLLASCMAGMAFNN HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCCC SGLGITHSIAHSLGGIFHVPHGLANAVVLPFVIQFNSFDAAVQYREIAQMLSLPAGSVGE CCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCC GTQSLIKAVRELNESMGIPNRIGALKIEESAYRQHADVIARNVLDDICTAGNPRMPSRAD CHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IRMLLEQAW HHHHHHHCC >Mature Secondary Structure TQFYGKTKICYGEDALETLERLPIKQAFIVTDPFMVKTGFIDRLISHLDLGGIRHRVFD CCCCCCCEEEECCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHC GVEPDPSLETVTKGTHLYMQDHAEAVIALGGGSAIDAAKAIAFFASKVDTSRPRPILVAI CCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE PTTSGTGSEVTAISVVTDKVNEVKIPLNDEQLIPDLAILDARFTRTLPPSVTSVTGMDVL ECCCCCCCCEEEEEEEECCCCEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH THAIEAYTSRKANAFTSIYAEYAIRYVFEYLPRAYRCSDDMEAREKMLLASCMAGMAFNN HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCCC SGLGITHSIAHSLGGIFHVPHGLANAVVLPFVIQFNSFDAAVQYREIAQMLSLPAGSVGE CCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCC GTQSLIKAVRELNESMGIPNRIGALKIEESAYRQHADVIARNVLDDICTAGNPRMPSRAD CHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH IRMLLEQAW HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2673928 [H]