Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358293

Identifier: 78358293

GI number: 78358293

Start: 3251428

End: 3252930

Strand: Reverse

Name: 78358293

Synonym: Dde_3253

Alternate gene names: NA

Gene position: 3252930-3251428 (Counterclockwise)

Preceding gene: 78358294

Following gene: 78358292

Centisome position: 87.2

GC content: 46.71

Gene sequence:

>1503_bases
ATGAGAGAAAACACCATGTCGATGCCGATAGGTCTACTGCGTGAATTCATCATGGAAGATCTGCGTGCCAAGCCTGGCGT
GCGCAGAAATGAAGAAATAGCAGTTTATATTTCGACATGGCTGGGGACCCCGGTGCCCTGGTATAGTATGATCATTGGTG
TTTTGCTGCATAGACGGGGGTATTCTGTCCGGTTTGTGTGGGACGATCTGTATGATCCTTTACAACCATCTGATATTGTA
CACAACGAAGAGATTGCCGAAGCTCTTTTGCTGCTGTCAAGCAGGGGGCTTCGCACCGATAAGTTGTCGAAAATGAAGCA
AATTGCCCCTTCGGAAGACTACCTGAAGGAGGCTTTGAGGCTGGCCTCGCTGCATTCCATCTGGTGGCACAAAACACCTG
TTCCTGCGCCAGAACTCCATACCCGTCGGCTGCAAAGTCTCAAGGTCATGATCGACAATTTGCCGTATATACTGGGATAT
TTTTCTGAAGTTGCGCCGCGCAGGTTGCTTATGCCCGGGGGGATTTTTGCAAATTCTGGTTTGTTTTTATGCGCCTGTGC
CCAGAATGGCGTTATTGCAACGACTTATGACAGTGGTGTTTCGTCAATTTCAACTGGGGTGAATTCTGTTGCGGCACATT
TAGATGACATTCCGCACGTCATGTGCCAGCTGCTGGATGCTGATAATGTGATAGCGTATGCCCGCGAAGCAGGGGGAGCA
GAGTTACAGAAACGCTTCAGCGGTGTTGATAAGTATCATTTCCAGCCTGTGGAGAGAAATTCAGGGCATGTGCAGAAGTA
TGATGTCATCTTTCCGCTGAATATCGAAAATGATTCTTCGGCACTCGGAAAGCATGTATTTTTTAATGATTCGCTTCAGT
GGCTCACGGAAACGATAGATTTTATATTCACAGAAACAAAGGCACATATTGCTGTCAGGCAACATCCCTATGAAAAGCGC
ATTCCGTGGCGAAATGACGCTCTGATACACACACTTAAAGAACGTTATGCGTCTACAGAACGCATTGCGATTTTCGATTG
TAATTCACAAATTAATACTTATGACATTATTGCATCTGCAAGCTTGATTTTGCCTTTTGTGTCCTCCATTGCTGTTGAAG
CGGCAATTATGGGCAAAACAGTCATTCCTGTTGCTCCTGCTTTCTATGCAGGGTTCTCTTTTGCGCAAATGCCGGCTAGT
AAAGGTTCTTATTTTACATCAATATTGAAAAGTCTGGAAGTGAAGACTGAAGTGCCTCCCGAAGCAAAAGACGAGGCCTG
GTTGGCATATTATTTATCTCAGATTTGCGGGCGGATTTGGACAGACTTTACTCCGCAGCCTGAGGACTATGCGCGTTGGG
AGGGGCGGTCACTTGCACAGCTGGAATCAGACATGAATGTTGAAGCAGTGTTGAAATGCCTCGGAGACGGTGCCTACATT
TCAATGGTCCAGCATGAACGCATACAGCGTGAAGGGCTTGCGTCAGTTTATCGCTGTTTCTGA

Upstream 100 bases:

>100_bases
CATTCAGAGCGTGGACGGCCCGTGATGAAAACGGTGAGCGGATTCTTATAAACGGACTTTCAATGCTTGTGCATTGTTTC
ATTGTTGAGATTGTAACACA

Downstream 100 bases:

>100_bases
TTATACTATCAGCTGCAAAAATATGTAGAGTAACGTATTGTGAGGGATTTATGTCTATAACAAAACGTATCAGAGACAAT
CAGAGAAATACTGTCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV
HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY
FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA
ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR
IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS
KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI
SMVQHERIQREGLASVYRCF

Sequences:

>Translated_500_residues
MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV
HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY
FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA
ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR
IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS
KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI
SMVQHERIQREGLASVYRCF
>Mature_500_residues
MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV
HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY
FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA
ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR
IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS
KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI
SMVQHERIQREGLASVYRCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56465; Mature: 56465

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRG
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC
YSVRFVWDDLYDPLQPSDIVHNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALR
CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
LASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGYFSEVAPRRLLMPGGIFANSG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEECCC
LFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA
EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETID
HHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCEEEECCHHHHHHHHHH
FIFTETKAHIAVRQHPYEKRIPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASA
HHHHCCHHEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
SLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPASKGSYFTSILKSLEVKTEVPP
HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
EAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHCCCHHH
SMVQHERIQREGLASVYRCF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRG
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC
YSVRFVWDDLYDPLQPSDIVHNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALR
CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
LASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGYFSEVAPRRLLMPGGIFANSG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEECCC
LFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA
EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETID
HHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCEEEECCHHHHHHHHHH
FIFTETKAHIAVRQHPYEKRIPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASA
HHHHCCHHEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
SLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPASKGSYFTSILKSLEVKTEVPP
HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
EAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHCCCHHH
SMVQHERIQREGLASVYRCF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA