| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358293
Identifier: 78358293
GI number: 78358293
Start: 3251428
End: 3252930
Strand: Reverse
Name: 78358293
Synonym: Dde_3253
Alternate gene names: NA
Gene position: 3252930-3251428 (Counterclockwise)
Preceding gene: 78358294
Following gene: 78358292
Centisome position: 87.2
GC content: 46.71
Gene sequence:
>1503_bases ATGAGAGAAAACACCATGTCGATGCCGATAGGTCTACTGCGTGAATTCATCATGGAAGATCTGCGTGCCAAGCCTGGCGT GCGCAGAAATGAAGAAATAGCAGTTTATATTTCGACATGGCTGGGGACCCCGGTGCCCTGGTATAGTATGATCATTGGTG TTTTGCTGCATAGACGGGGGTATTCTGTCCGGTTTGTGTGGGACGATCTGTATGATCCTTTACAACCATCTGATATTGTA CACAACGAAGAGATTGCCGAAGCTCTTTTGCTGCTGTCAAGCAGGGGGCTTCGCACCGATAAGTTGTCGAAAATGAAGCA AATTGCCCCTTCGGAAGACTACCTGAAGGAGGCTTTGAGGCTGGCCTCGCTGCATTCCATCTGGTGGCACAAAACACCTG TTCCTGCGCCAGAACTCCATACCCGTCGGCTGCAAAGTCTCAAGGTCATGATCGACAATTTGCCGTATATACTGGGATAT TTTTCTGAAGTTGCGCCGCGCAGGTTGCTTATGCCCGGGGGGATTTTTGCAAATTCTGGTTTGTTTTTATGCGCCTGTGC CCAGAATGGCGTTATTGCAACGACTTATGACAGTGGTGTTTCGTCAATTTCAACTGGGGTGAATTCTGTTGCGGCACATT TAGATGACATTCCGCACGTCATGTGCCAGCTGCTGGATGCTGATAATGTGATAGCGTATGCCCGCGAAGCAGGGGGAGCA GAGTTACAGAAACGCTTCAGCGGTGTTGATAAGTATCATTTCCAGCCTGTGGAGAGAAATTCAGGGCATGTGCAGAAGTA TGATGTCATCTTTCCGCTGAATATCGAAAATGATTCTTCGGCACTCGGAAAGCATGTATTTTTTAATGATTCGCTTCAGT GGCTCACGGAAACGATAGATTTTATATTCACAGAAACAAAGGCACATATTGCTGTCAGGCAACATCCCTATGAAAAGCGC ATTCCGTGGCGAAATGACGCTCTGATACACACACTTAAAGAACGTTATGCGTCTACAGAACGCATTGCGATTTTCGATTG TAATTCACAAATTAATACTTATGACATTATTGCATCTGCAAGCTTGATTTTGCCTTTTGTGTCCTCCATTGCTGTTGAAG CGGCAATTATGGGCAAAACAGTCATTCCTGTTGCTCCTGCTTTCTATGCAGGGTTCTCTTTTGCGCAAATGCCGGCTAGT AAAGGTTCTTATTTTACATCAATATTGAAAAGTCTGGAAGTGAAGACTGAAGTGCCTCCCGAAGCAAAAGACGAGGCCTG GTTGGCATATTATTTATCTCAGATTTGCGGGCGGATTTGGACAGACTTTACTCCGCAGCCTGAGGACTATGCGCGTTGGG AGGGGCGGTCACTTGCACAGCTGGAATCAGACATGAATGTTGAAGCAGTGTTGAAATGCCTCGGAGACGGTGCCTACATT TCAATGGTCCAGCATGAACGCATACAGCGTGAAGGGCTTGCGTCAGTTTATCGCTGTTTCTGA
Upstream 100 bases:
>100_bases CATTCAGAGCGTGGACGGCCCGTGATGAAAACGGTGAGCGGATTCTTATAAACGGACTTTCAATGCTTGTGCATTGTTTC ATTGTTGAGATTGTAACACA
Downstream 100 bases:
>100_bases TTATACTATCAGCTGCAAAAATATGTAGAGTAACGTATTGTGAGGGATTTATGTCTATAACAAAACGTATCAGAGACAAT CAGAGAAATACTGTCCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI SMVQHERIQREGLASVYRCF
Sequences:
>Translated_500_residues MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI SMVQHERIQREGLASVYRCF >Mature_500_residues MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRGYSVRFVWDDLYDPLQPSDIV HNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALRLASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGY FSEVAPRRLLMPGGIFANSGLFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETIDFIFTETKAHIAVRQHPYEKR IPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASASLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPAS KGSYFTSILKSLEVKTEVPPEAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI SMVQHERIQREGLASVYRCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56465; Mature: 56465
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC YSVRFVWDDLYDPLQPSDIVHNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALR CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH LASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGYFSEVAPRRLLMPGGIFANSG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEECCC LFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETID HHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCEEEECCHHHHHHHHHH FIFTETKAHIAVRQHPYEKRIPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASA HHHHCCHHEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH SLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPASKGSYFTSILKSLEVKTEVPP HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC EAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHCCCHHH SMVQHERIQREGLASVYRCF HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRENTMSMPIGLLREFIMEDLRAKPGVRRNEEIAVYISTWLGTPVPWYSMIIGVLLHRRG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC YSVRFVWDDLYDPLQPSDIVHNEEIAEALLLLSSRGLRTDKLSKMKQIAPSEDYLKEALR CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH LASLHSIWWHKTPVPAPELHTRRLQSLKVMIDNLPYILGYFSEVAPRRLLMPGGIFANSG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEECCC LFLCACAQNGVIATTYDSGVSSISTGVNSVAAHLDDIPHVMCQLLDADNVIAYAREAGGA EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH ELQKRFSGVDKYHFQPVERNSGHVQKYDVIFPLNIENDSSALGKHVFFNDSLQWLTETID HHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCEEEECCHHHHHHHHHH FIFTETKAHIAVRQHPYEKRIPWRNDALIHTLKERYASTERIAIFDCNSQINTYDIIASA HHHHCCHHEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH SLILPFVSSIAVEAAIMGKTVIPVAPAFYAGFSFAQMPASKGSYFTSILKSLEVKTEVPP HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC EAKDEAWLAYYLSQICGRIWTDFTPQPEDYARWEGRSLAQLESDMNVEAVLKCLGDGAYI CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHCCCHHH SMVQHERIQREGLASVYRCF HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA