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The map label for this gene is rsgA2 [H]

Identifier: 78358210

GI number: 78358210

Start: 3157353

End: 3158417

Strand: Reverse

Name: rsgA2 [H]

Synonym: Dde_3170

Alternate gene names: 78358210

Gene position: 3158417-3157353 (Counterclockwise)

Preceding gene: 78358211

Following gene: 78358208

Centisome position: 84.67

GC content: 59.81

Gene sequence:

>1065_bases
ATGATGCAGGCGCAATGCGATCTCGCCCGTCTGGGATGGGGGCCTTTTTTTCAGCAGCAGCTGAGTATTGAAGAGTGGGA
GGAGGCTCTGCCCGCGCGCGTGGCGGGGCTGAATCGTCATATACTGGGTCTTGTGACGGAAAACGGTCCGGTTCAGGCGG
CTGTGCCGGGCAGCTGGTACACCGGCGGGCCGGAAGACGTGCCCACAGTGGGCGACTGGCTGCTGCTGGACCGCCGGACA
AGCCAGCCGGTGCGCCTGCTGGAGCGTAAAAGCTTTCTGCACCGCAGAGCGGCGGGGCGCGAGGCAAAAATTCAGGCGCT
GGCAGCCAACATAGATACACTGTTCATAGTTACTTCATGCAACGATGATTTCAATCCTTCGCGCATAGAACGGTATCTTA
CACTTGCCATGGGATCGGGGGTGACACCGGTTCTTGTTATTACCAAGGCTGATCTGGTTGCTGATGCGGATGAATTCATC
GGGCGGGCAAAAGCCATCAGGCAGGATCTGGACGTGTGCGTGCTCAATGCTCTGGATGCCGGTTCTGCGGCCGTTCTGGA
AAACTGGTGCGGCAAAGGGCAGACTCTGGCGCTTGCAGGGTCGTCGGGTGTGGGCAAGTCTACGCTGGTCAACACCCTGC
AGGGAGAGCATATCCAGTCCACCGGTGCCATACGGGAACACGATGCCAGAGGGCGCCACACTACCACCGGACGCAGTCTG
CATATGCTGCCTTCCGGAGCTGTTCTCATTGATACTCCGGGCATCCGCGAGCTGCAGCTTGCCGATGTCGGACAGGGACT
GGCATCGGCATTTGACGATATCGAGCAGCTGGCCGCGGGGTGCCGTTTCAATGACTGCACCCACGACCATGAGTCCGGCT
GTGCTGTTCAGGCTGCGGTGCTCAGCGGCGAGCTGGAACTGCGCAGGCTTGAAAACTACCGCAAAATAAGGGCTGAGCAG
CAGCACAATGCGCTGAGCGTGGCGGAAAAAAGGGACAAGGCCCGGAAGTTCGGCAAGATGTGCCGGAACGCCGTGGCCAT
GCAGCGGAAAAAACGCCTGCGGTGA

Upstream 100 bases:

>100_bases
GCTTGGGCAGTCTCTTGCCGGTACCGGCATCCGGCCTGTTGCCGGCAGATCATACTGTGTTGAAGCGTTTAACAAAGCAG
TTTACTGGTGATTTATGGAT

Downstream 100 bases:

>100_bases
TACATGGGGCTGTCGTTGCGGGGCAGCCCGCCGGGCCATGACCCTGCAAGCCGCCACGGCAGACGTACGGCCGCAGGCTT
GCTGCACCCTTACAGCAGCA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MMQAQCDLARLGWGPFFQQQLSIEEWEEALPARVAGLNRHILGLVTENGPVQAAVPGSWYTGGPEDVPTVGDWLLLDRRT
SQPVRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSCNDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADADEFI
GRAKAIRQDLDVCVLNALDAGSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQSTGAIREHDARGRHTTTGRSL
HMLPSGAVLIDTPGIRELQLADVGQGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAVLSGELELRRLENYRKIRAEQ
QHNALSVAEKRDKARKFGKMCRNAVAMQRKKRLR

Sequences:

>Translated_354_residues
MMQAQCDLARLGWGPFFQQQLSIEEWEEALPARVAGLNRHILGLVTENGPVQAAVPGSWYTGGPEDVPTVGDWLLLDRRT
SQPVRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSCNDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADADEFI
GRAKAIRQDLDVCVLNALDAGSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQSTGAIREHDARGRHTTTGRSL
HMLPSGAVLIDTPGIRELQLADVGQGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAVLSGELELRRLENYRKIRAEQ
QHNALSVAEKRDKARKFGKMCRNAVAMQRKKRLR
>Mature_354_residues
MMQAQCDLARLGWGPFFQQQLSIEEWEEALPARVAGLNRHILGLVTENGPVQAAVPGSWYTGGPEDVPTVGDWLLLDRRT
SQPVRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSCNDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADADEFI
GRAKAIRQDLDVCVLNALDAGSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQSTGAIREHDARGRHTTTGRSL
HMLPSGAVLIDTPGIRELQLADVGQGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAVLSGELELRRLENYRKIRAEQ
QHNALSVAEKRDKARKFGKMCRNAVAMQRKKRLR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=218, Percent_Identity=31.651376146789, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38607; Mature: 38607

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQAQCDLARLGWGPFFQQQLSIEEWEEALPARVAGLNRHILGLVTENGPVQAAVPGSWY
CCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCC
TGGPEDVPTVGDWLLLDRRTSQPVRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSC
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHEECCCEEEEEEEC
NDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADADEFIGRAKAIRQDLDVCVLNALDA
CCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
GSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQSTGAIREHDARGRHTTTGRSL
CCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCHHCCCCCHHCCCCCCCCCCCCEE
HMLPSGAVLIDTPGIRELQLADVGQGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAV
EECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH
LSGELELRRLENYRKIRAEQQHNALSVAEKRDKARKFGKMCRNAVAMQRKKRLR
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQAQCDLARLGWGPFFQQQLSIEEWEEALPARVAGLNRHILGLVTENGPVQAAVPGSWY
CCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCC
TGGPEDVPTVGDWLLLDRRTSQPVRLLERKSFLHRRAAGREAKIQALAANIDTLFIVTSC
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHEECCCEEEEEEEC
NDDFNPSRIERYLTLAMGSGVTPVLVITKADLVADADEFIGRAKAIRQDLDVCVLNALDA
CCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
GSAAVLENWCGKGQTLALAGSSGVGKSTLVNTLQGEHIQSTGAIREHDARGRHTTTGRSL
CCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCHHCCCCCHHCCCCCCCCCCCCEE
HMLPSGAVLIDTPGIRELQLADVGQGLASAFDDIEQLAAGCRFNDCTHDHESGCAVQAAV
EECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH
LSGELELRRLENYRKIRAEQQHNALSVAEKRDKARKFGKMCRNAVAMQRKKRLR
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA