Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357653
Identifier: 78357653
GI number: 78357653
Start: 2628530
End: 2629045
Strand: Direct
Name: 78357653
Synonym: Dde_2611
Alternate gene names: NA
Gene position: 2628530-2629045 (Clockwise)
Preceding gene: 78357652
Following gene: 78357661
Centisome position: 70.47
GC content: 61.24
Gene sequence:
>516_bases ATGAATCGGCCTTTCTCACTGCGGTTCCTGCTGACGGCAGGCCTGCTGGCTGTTCTGACCATGGGCGTGCTGGCAGGATG CTCCGGCCAGAATGTCCGGCATCTGGCTCATGAGACGTGGGGCAGATCCGGCGACAACCACATAGGCATGCAGTTCTGGC GGTTCGGTTTCACCACCGTGGATATGGGCGACAGCGTGGGTGTGATCGGCACCGCCCTGCCCAACTCCGAACTGTATCCG CAATGGGCGGCATGGTACGGGCAGCTGACCATCACGGCATACCTCAGCGACCACACCGGACAGGTCATCGCCCGCGACAC GCATACCTATGTTCCGCGTCCCATAGGCAAAGAACGGGGGATTCCGCTGGAATTCACCTTTGACGCCGGCACCGTAGACG CACAGTACATTTCATTCGGCTACCGCATGCTGCTTACCGAACAGCCGCCCGATGCCGTTTCCGGCGGGCAGCAGGGCAGA ATGCAGCTTGTACAGGAGGACGCGCTGCGGCAGTAA
Upstream 100 bases:
>100_bases GTGGGCCCCAGACTGAAAAAGTTGCCCCGGGTTGACTTGACGCTTGCAGAAATGCTTTTCTACGGTCCTCCTAAACTGTA ACCCTGTATGGCGGTGACAC
Downstream 100 bases:
>100_bases CACAGCTGCGGCATGTTCCTTCCCTCCCCCGCCTTTTGCTTATGAAGCAGAAGCAGCCATATTACCGAAAAGCAGAACGG CCGGCAGCAATGCCGGCCGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNRPFSLRFLLTAGLLAVLTMGVLAGCSGQNVRHLAHETWGRSGDNHIGMQFWRFGFTTVDMGDSVGVIGTALPNSELYP QWAAWYGQLTITAYLSDHTGQVIARDTHTYVPRPIGKERGIPLEFTFDAGTVDAQYISFGYRMLLTEQPPDAVSGGQQGR MQLVQEDALRQ
Sequences:
>Translated_171_residues MNRPFSLRFLLTAGLLAVLTMGVLAGCSGQNVRHLAHETWGRSGDNHIGMQFWRFGFTTVDMGDSVGVIGTALPNSELYP QWAAWYGQLTITAYLSDHTGQVIARDTHTYVPRPIGKERGIPLEFTFDAGTVDAQYISFGYRMLLTEQPPDAVSGGQQGR MQLVQEDALRQ >Mature_171_residues MNRPFSLRFLLTAGLLAVLTMGVLAGCSGQNVRHLAHETWGRSGDNHIGMQFWRFGFTTVDMGDSVGVIGTALPNSELYP QWAAWYGQLTITAYLSDHTGQVIARDTHTYVPRPIGKERGIPLEFTFDAGTVDAQYISFGYRMLLTEQPPDAVSGGQQGR MQLVQEDALRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18907; Mature: 18907
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPFSLRFLLTAGLLAVLTMGVLAGCSGQNVRHLAHETWGRSGDNHIGMQFWRFGFTTV CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEHECCCEEE DMGDSVGVIGTALPNSELYPQWAAWYGQLTITAYLSDHTGQVIARDTHTYVPRPIGKERG ECCCCCCEEEECCCCCCCCHHHHHHCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC IPLEFTFDAGTVDAQYISFGYRMLLTEQPPDAVSGGQQGRMQLVQEDALRQ CCEEEEECCCCCCHHHHHHCEEEEEECCCCCHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNRPFSLRFLLTAGLLAVLTMGVLAGCSGQNVRHLAHETWGRSGDNHIGMQFWRFGFTTV CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEHECCCEEE DMGDSVGVIGTALPNSELYPQWAAWYGQLTITAYLSDHTGQVIARDTHTYVPRPIGKERG ECCCCCCEEEECCCCCCCCHHHHHHCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC IPLEFTFDAGTVDAQYISFGYRMLLTEQPPDAVSGGQQGRMQLVQEDALRQ CCEEEEECCCCCCHHHHHHCEEEEEECCCCCHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA