Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357645
Identifier: 78357645
GI number: 78357645
Start: 2621702
End: 2624017
Strand: Direct
Name: 78357645
Synonym: Dde_2603
Alternate gene names: NA
Gene position: 2621702-2624017 (Clockwise)
Preceding gene: 78357644
Following gene: 78357649
Centisome position: 70.28
GC content: 63.51
Gene sequence:
>2316_bases ATGGACAAATACCTGTGCATTCACGGCCATTTTTACCAACCCCCCCGCGAAGACCCGTGGCTGGGCACCGTGCTGCCCGA AGGCAGCGCCGCACCGGCCTGCAACTGGAACGAGCGCATACTGCGTGAAAGCTATGCCCCCATGGGCTGGGCACGCAGGC TGGACGGCTCCGGACGCATTGCAGACATACTGAACTGCTATGAATGGATCAGCTTCAATGCCGGCCCGACCCTGATGCGC TGGCTGGAAAGAGATGATCCGCACACCTATGCCCGCATGCTGGAAGCCGACAGGCTGAGCATGTCGCGCTGGGGCCACGG CAACGCACTGGCGCAGGTCTATCACCACATCATTATGCCGCTGGCCGGCAAGGAACAACGCAGGCTGGAAATACAATGGG CACTTGACGACTTTGCCCATCGTTTCGGCAGACAGGCCGAAGGCATGTGGCTGGCAGAAAGCGCCGCAGACACCGCTACA CTGGAAGAACTGGCTGCACACGGAGTGCGTTTCACCGTGCTGGCTCCCCGGCAGGCCCGCCGGATCTGCACGCCGGACGG CAGCTGGAACGCCGTGGACGAACATTCTCTGGATGTAAGACGGTCTTATCGTATAGATCTGCCTTCCGGCGCCAGCATCA CTGTATTTTTCTATCACGGTGCCATCTCGCGCGCCGTGGCGTTTGAAAAGCTGCTGCGCGACGGAGAAAGCTTCTGGCAC CGCATAGCCGCAGCAGCAGGCGAAGGTCTGCTGACACTGTGCACAGACGGAGAAACCTACGGCCACCACTTCACCTTCGG CGAGATGGCACTGGCCCACGTCCTTGCGCAGGCCTATTCCGGCAGAGACGGCATCCGCCCCATCAACATGGCGGCCTTTC TGGCCCGGCACCCTGCAGAATGGCGCGCAGAGCTGCACGAACCATCCTCGTGGAGCTGCGTTCACGGCGTGGAACGCTGG CGTTCGGACTGCGGCTGCACGGACGGCGGGCATCCCGGCTGGAATCAGGCATGGCGCAAACCGCTACGGGACGCACTGGA CATTGCAAGCCATGCTGTTGACACCCATTTCGAAAGCAAGGCACCGGCTCTTTTCACAAACCCGCAACAGGCGCTCTCAG GTTTCGGACTGCTGCTGTGCGGTGCGGAGCAGCGGCAGGACTTCGCCGCGCGGCATATCATGCTGTCAGCTGATGACGCC GCGGCCGGTTCAGCTTGGAAACTGCTGACCATGAAAGAACAGATGCTGGCCGCATATGCCAGCTGCGCCTGGTTTTTTGA CGAGCTTTCGCGCATCGAACCGGTCAACGCTCTGACCTATGCCCTGCGGGCACTGGAAATCCGGCGCCAGACAGGCGGCG GAGACATTCCCGAAGAATTTCTGCAGCAGCTTGAAAAGGCCCTGTCAAACAAGCCGGAAGAAGGCACCGGCAGAACCATT TTTGAAAACCGCGCGCTCCCGCGCTGCGAAACACAGGCATCGCTGGTGCTGCAGGCCCTGCTGACCACAGCCTATCAGGG AAGACTGCAGGCCGGAGTACCGGCCTGTGCCTCGTGGCCGGCAGTGGATGTGGAAATAACAGTCGTTCCCGCCGGCACGG ACGGGCAACCCGCGGAAAACAGCCGGAACGCGCCCGCCGCCAGCGGCACGGCCCGGATACGCTGGCATCCAGCGGCATGG GATCAGCCGTTCAGCTGGGAGCTGTGCAACACCTGCGGCCGGACGCTCCGGCGCGGCGGCAACATTCTGCTGTCGCCGCC CGACGGTCTGCAGGTTACGGTGACCGGCACACAGGGGGGCGACTCGTCGTGCGGCTTTGACCAGCTGCCATGGAACAAAA AACAGGCGCTGGCCATGACATACATTCTGCATTCGGTGGCCCAGCGGCGGGCGGATGCGCTGGCCCGCACGCCCGATGCC CTTGCCCTGTTCCTGCCGTGGGAGGAAGCGCAGCAGGATCAGCCGGACGCACACCTGTGGGAGGAATTTGCGCCGGAAAT GCTGCTGGCGCTGGCCACCGGAACGGGCCCGCAGGACGCCCGCGCACAGGCCGCCGCGGCATGGCTTTACAAGGTGGAAC TGCCGGCAGGTGCGCGCCGCAGGCTGGAAGCAACAGCCCAGCAGACCGCGTTGAAACTGCTGGAGTCCCCTGTGCAGTGG ACGGCGCTGGAAAAACTGGTACGCACCCTGTCGGAACATGTGGCCGGACTGGACTGGTGGCCCGTGCAGAACCGCGTATG GGCCATGCGTCCGTGGAACGCGCAGGCAGGTGCGGCAGCCCGCGCGCTGGGATTCAGGCCGGACGAGCCGCAGTAG
Upstream 100 bases:
>100_bases CTTTTTGCGCACCTGCCTGTCCGCCGCTGCAAAAACGGTGTATGCTGACTGTGTTTACCGGCGCCCTGCCAAGACATCTT TACCGCTCCGGAGGTCCGGC
Downstream 100 bases:
>100_bases TCCGCGCGCAGCGGTGTTCCCCGATATAATGTTTCCGTACACAAAAACGCCGCAGCAGATGCTGCGGCGTTTTTTGTCTG CAATAAAAACCGCGGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase
Number of amino acids: Translated: 771; Mature: 771
Protein sequence:
>771_residues MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ
Sequences:
>Translated_771_residues MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ >Mature_771_residues MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85560; Mature: 85560
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00436 PEROXIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRI CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCH ADILNCYEWISFNAGPTLMRWLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMP HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC LAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTATLEELAAHGVRFTVLAPRQAR CCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCHHHC RICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH CCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAE HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH WRAELHEPSSWSCVHGVERWRSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESK HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC APALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDAAAGSAWKLLTMKEQMLAAYA CCEEECCHHHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHHH SCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAEN ECCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC SRNAPAASGTARIRWHPAAWDQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGG CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCC DSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDALALFLPWEEAQQDQPDAHLW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHH EEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW HHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRI CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCH ADILNCYEWISFNAGPTLMRWLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMP HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC LAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTATLEELAAHGVRFTVLAPRQAR CCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCHHHC RICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH CCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAE HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH WRAELHEPSSWSCVHGVERWRSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESK HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC APALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDAAAGSAWKLLTMKEQMLAAYA CCEEECCHHHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHHH SCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAEN ECCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC SRNAPAASGTARIRWHPAAWDQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGG CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCC DSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDALALFLPWEEAQQDQPDAHLW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHH EEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW HHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA