Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357645

Identifier: 78357645

GI number: 78357645

Start: 2621702

End: 2624017

Strand: Direct

Name: 78357645

Synonym: Dde_2603

Alternate gene names: NA

Gene position: 2621702-2624017 (Clockwise)

Preceding gene: 78357644

Following gene: 78357649

Centisome position: 70.28

GC content: 63.51

Gene sequence:

>2316_bases
ATGGACAAATACCTGTGCATTCACGGCCATTTTTACCAACCCCCCCGCGAAGACCCGTGGCTGGGCACCGTGCTGCCCGA
AGGCAGCGCCGCACCGGCCTGCAACTGGAACGAGCGCATACTGCGTGAAAGCTATGCCCCCATGGGCTGGGCACGCAGGC
TGGACGGCTCCGGACGCATTGCAGACATACTGAACTGCTATGAATGGATCAGCTTCAATGCCGGCCCGACCCTGATGCGC
TGGCTGGAAAGAGATGATCCGCACACCTATGCCCGCATGCTGGAAGCCGACAGGCTGAGCATGTCGCGCTGGGGCCACGG
CAACGCACTGGCGCAGGTCTATCACCACATCATTATGCCGCTGGCCGGCAAGGAACAACGCAGGCTGGAAATACAATGGG
CACTTGACGACTTTGCCCATCGTTTCGGCAGACAGGCCGAAGGCATGTGGCTGGCAGAAAGCGCCGCAGACACCGCTACA
CTGGAAGAACTGGCTGCACACGGAGTGCGTTTCACCGTGCTGGCTCCCCGGCAGGCCCGCCGGATCTGCACGCCGGACGG
CAGCTGGAACGCCGTGGACGAACATTCTCTGGATGTAAGACGGTCTTATCGTATAGATCTGCCTTCCGGCGCCAGCATCA
CTGTATTTTTCTATCACGGTGCCATCTCGCGCGCCGTGGCGTTTGAAAAGCTGCTGCGCGACGGAGAAAGCTTCTGGCAC
CGCATAGCCGCAGCAGCAGGCGAAGGTCTGCTGACACTGTGCACAGACGGAGAAACCTACGGCCACCACTTCACCTTCGG
CGAGATGGCACTGGCCCACGTCCTTGCGCAGGCCTATTCCGGCAGAGACGGCATCCGCCCCATCAACATGGCGGCCTTTC
TGGCCCGGCACCCTGCAGAATGGCGCGCAGAGCTGCACGAACCATCCTCGTGGAGCTGCGTTCACGGCGTGGAACGCTGG
CGTTCGGACTGCGGCTGCACGGACGGCGGGCATCCCGGCTGGAATCAGGCATGGCGCAAACCGCTACGGGACGCACTGGA
CATTGCAAGCCATGCTGTTGACACCCATTTCGAAAGCAAGGCACCGGCTCTTTTCACAAACCCGCAACAGGCGCTCTCAG
GTTTCGGACTGCTGCTGTGCGGTGCGGAGCAGCGGCAGGACTTCGCCGCGCGGCATATCATGCTGTCAGCTGATGACGCC
GCGGCCGGTTCAGCTTGGAAACTGCTGACCATGAAAGAACAGATGCTGGCCGCATATGCCAGCTGCGCCTGGTTTTTTGA
CGAGCTTTCGCGCATCGAACCGGTCAACGCTCTGACCTATGCCCTGCGGGCACTGGAAATCCGGCGCCAGACAGGCGGCG
GAGACATTCCCGAAGAATTTCTGCAGCAGCTTGAAAAGGCCCTGTCAAACAAGCCGGAAGAAGGCACCGGCAGAACCATT
TTTGAAAACCGCGCGCTCCCGCGCTGCGAAACACAGGCATCGCTGGTGCTGCAGGCCCTGCTGACCACAGCCTATCAGGG
AAGACTGCAGGCCGGAGTACCGGCCTGTGCCTCGTGGCCGGCAGTGGATGTGGAAATAACAGTCGTTCCCGCCGGCACGG
ACGGGCAACCCGCGGAAAACAGCCGGAACGCGCCCGCCGCCAGCGGCACGGCCCGGATACGCTGGCATCCAGCGGCATGG
GATCAGCCGTTCAGCTGGGAGCTGTGCAACACCTGCGGCCGGACGCTCCGGCGCGGCGGCAACATTCTGCTGTCGCCGCC
CGACGGTCTGCAGGTTACGGTGACCGGCACACAGGGGGGCGACTCGTCGTGCGGCTTTGACCAGCTGCCATGGAACAAAA
AACAGGCGCTGGCCATGACATACATTCTGCATTCGGTGGCCCAGCGGCGGGCGGATGCGCTGGCCCGCACGCCCGATGCC
CTTGCCCTGTTCCTGCCGTGGGAGGAAGCGCAGCAGGATCAGCCGGACGCACACCTGTGGGAGGAATTTGCGCCGGAAAT
GCTGCTGGCGCTGGCCACCGGAACGGGCCCGCAGGACGCCCGCGCACAGGCCGCCGCGGCATGGCTTTACAAGGTGGAAC
TGCCGGCAGGTGCGCGCCGCAGGCTGGAAGCAACAGCCCAGCAGACCGCGTTGAAACTGCTGGAGTCCCCTGTGCAGTGG
ACGGCGCTGGAAAAACTGGTACGCACCCTGTCGGAACATGTGGCCGGACTGGACTGGTGGCCCGTGCAGAACCGCGTATG
GGCCATGCGTCCGTGGAACGCGCAGGCAGGTGCGGCAGCCCGCGCGCTGGGATTCAGGCCGGACGAGCCGCAGTAG

Upstream 100 bases:

>100_bases
CTTTTTGCGCACCTGCCTGTCCGCCGCTGCAAAAACGGTGTATGCTGACTGTGTTTACCGGCGCCCTGCCAAGACATCTT
TACCGCTCCGGAGGTCCGGC

Downstream 100 bases:

>100_bases
TCCGCGCGCAGCGGTGTTCCCCGATATAATGTTTCCGTACACAAAAACGCCGCAGCAGATGCTGCGGCGTTTTTTGTCTG
CAATAAAAACCGCGGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase

Number of amino acids: Translated: 771; Mature: 771

Protein sequence:

>771_residues
MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR
WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT
LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH
RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW
RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA
AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI
FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW
DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA
LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW
TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ

Sequences:

>Translated_771_residues
MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR
WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT
LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH
RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW
RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA
AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI
FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW
DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA
LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW
TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ
>Mature_771_residues
MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRIADILNCYEWISFNAGPTLMR
WLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMPLAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTAT
LEELAAHGVRFTVLAPRQARRICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH
RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAEWRAELHEPSSWSCVHGVERW
RSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESKAPALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDA
AAGSAWKLLTMKEQMLAAYASCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI
FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAENSRNAPAASGTARIRWHPAAW
DQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGGDSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDA
LALFLPWEEAQQDQPDAHLWEEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW
TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85560; Mature: 85560

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00436 PEROXIDASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRI
CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCH
ADILNCYEWISFNAGPTLMRWLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMP
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
LAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTATLEELAAHGVRFTVLAPRQAR
CCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCHHHC
RICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH
CCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAE
HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH
WRAELHEPSSWSCVHGVERWRSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESK
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDAAAGSAWKLLTMKEQMLAAYA
CCEEECCHHHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHHH
SCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAEN
ECCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
SRNAPAASGTARIRWHPAAWDQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGG
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCC
DSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDALALFLPWEEAQQDQPDAHLW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHH
EEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW
HHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH
TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MDKYLCIHGHFYQPPREDPWLGTVLPEGSAAPACNWNERILRESYAPMGWARRLDGSGRI
CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCH
ADILNCYEWISFNAGPTLMRWLERDDPHTYARMLEADRLSMSRWGHGNALAQVYHHIIMP
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
LAGKEQRRLEIQWALDDFAHRFGRQAEGMWLAESAADTATLEELAAHGVRFTVLAPRQAR
CCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCEEEEEECCHHHC
RICTPDGSWNAVDEHSLDVRRSYRIDLPSGASITVFFYHGAISRAVAFEKLLRDGESFWH
CCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
RIAAAAGEGLLTLCTDGETYGHHFTFGEMALAHVLAQAYSGRDGIRPINMAAFLARHPAE
HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH
WRAELHEPSSWSCVHGVERWRSDCGCTDGGHPGWNQAWRKPLRDALDIASHAVDTHFESK
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APALFTNPQQALSGFGLLLCGAEQRQDFAARHIMLSADDAAAGSAWKLLTMKEQMLAAYA
CCEEECCHHHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHHHH
SCAWFFDELSRIEPVNALTYALRALEIRRQTGGGDIPEEFLQQLEKALSNKPEEGTGRTI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
FENRALPRCETQASLVLQALLTTAYQGRLQAGVPACASWPAVDVEITVVPAGTDGQPAEN
ECCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
SRNAPAASGTARIRWHPAAWDQPFSWELCNTCGRTLRRGGNILLSPPDGLQVTVTGTQGG
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCC
DSSCGFDQLPWNKKQALAMTYILHSVAQRRADALARTPDALALFLPWEEAQQDQPDAHLW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHH
EEFAPEMLLALATGTGPQDARAQAAAAWLYKVELPAGARRRLEATAQQTALKLLESPVQW
HHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH
TALEKLVRTLSEHVAGLDWWPVQNRVWAMRPWNAQAGAAARALGFRPDEPQ
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA