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The map label for this gene is nirD [H]

Identifier: 78357620

GI number: 78357620

Start: 2594769

End: 2595263

Strand: Direct

Name: nirD [H]

Synonym: Dde_2578

Alternate gene names: 78357620

Gene position: 2594769-2595263 (Clockwise)

Preceding gene: 78357619

Following gene: 78357621

Centisome position: 69.56

GC content: 53.74

Gene sequence:

>495_bases
ATGACTGGACCCGCCGTGCAGGATCAGGAGCTGGATCAGTTCGATAAAAAAATTCTGGATATCATCCAGACCGGTTTTCC
GCTGGAACCACGGCCGTATGCCGTTATCGGCGATGCAGTGGGCCTGACTGAAGCAGAAGCCCTCGCCCGCGTGCGCGCCC
TGAAGGAACGCAAAATAATCAGACGGCTGGGAGCCAACTTCAATTCATGGAAGCTCGGTTTCCGCTCTACACTTTGCGCC
GCCAAAGTACCTGAAGACAAGTTCGACGAATTTGTGGCCGAAGTGAACAGCCATGTGGGTGTCACCCACAACTACCTGCG
CGCCCATGCGTACAATGTCTGGTTCACCTTTATCGGCCCCAGCTGGGAAGAAGTGTGCAGCACTCTGGACAGCATAACGC
AGAAAACCGGCATTCCCATTCTGAATCTGCCCGCAGAAGAGCTGTATAAAATAAGGGTTGATTTCAAGATGGATGAAGAC
CCCGCTGCGGACTGA

Upstream 100 bases:

>100_bases
CAGCCGCGCAAAAAGCCCGCCGCAGACCGTAAATAAACGTCATGGCTGTGCATACAGCAGCCGGACGCGGCTTCACTCTT
AACGATTCACAGGAGCTAGC

Downstream 100 bases:

>100_bases
CAACGTCGTACCGTTGCGCTGCGGCATGTTCCCCGCGCAGTACAAGCCGCCCATACGCCGTCATGCAGGGTGCCAACCTT
TTGGGTCGGCACCCTGTTTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTGPAVQDQELDQFDKKILDIIQTGFPLEPRPYAVIGDAVGLTEAEALARVRALKERKIIRRLGANFNSWKLGFRSTLCA
AKVPEDKFDEFVAEVNSHVGVTHNYLRAHAYNVWFTFIGPSWEEVCSTLDSITQKTGIPILNLPAEELYKIRVDFKMDED
PAAD

Sequences:

>Translated_164_residues
MTGPAVQDQELDQFDKKILDIIQTGFPLEPRPYAVIGDAVGLTEAEALARVRALKERKIIRRLGANFNSWKLGFRSTLCA
AKVPEDKFDEFVAEVNSHVGVTHNYLRAHAYNVWFTFIGPSWEEVCSTLDSITQKTGIPILNLPAEELYKIRVDFKMDED
PAAD
>Mature_163_residues
TGPAVQDQELDQFDKKILDIIQTGFPLEPRPYAVIGDAVGLTEAEALARVRALKERKIIRRLGANFNSWKLGFRSTLCAA
KVPEDKFDEFVAEVNSHVGVTHNYLRAHAYNVWFTFIGPSWEEVCSTLDSITQKTGIPILNLPAEELYKIRVDFKMDEDP
AAD

Specific function: Required for the biosynthesis of heme D1 of nitrite reductase [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18482; Mature: 18351

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPAVQDQELDQFDKKILDIIQTGFPLEPRPYAVIGDAVGLTEAEALARVRALKERKII
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
RRLGANFNSWKLGFRSTLCAAKVPEDKFDEFVAEVNSHVGVTHNYLRAHAYNVWFTFIGP
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEECC
SWEEVCSTLDSITQKTGIPILNLPAEELYKIRVDFKMDEDPAAD
CHHHHHHHHHHHHHHHCCCEEECCHHHHEEEEEEEEECCCCCCC
>Mature Secondary Structure 
TGPAVQDQELDQFDKKILDIIQTGFPLEPRPYAVIGDAVGLTEAEALARVRALKERKII
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
RRLGANFNSWKLGFRSTLCAAKVPEDKFDEFVAEVNSHVGVTHNYLRAHAYNVWFTFIGP
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEECC
SWEEVCSTLDSITQKTGIPILNLPAEELYKIRVDFKMDEDPAAD
CHHHHHHHHHHHHHHHCCCEEECCHHHHEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]