Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357562
Identifier: 78357562
GI number: 78357562
Start: 2540665
End: 2540886
Strand: Direct
Name: 78357562
Synonym: Dde_2519
Alternate gene names: NA
Gene position: 2540665-2540886 (Clockwise)
Preceding gene: 78357561
Following gene: 78357563
Centisome position: 68.11
GC content: 59.91
Gene sequence:
>222_bases ATGCCCGATATGTTCGATCAGGCCAGCGATCTGGAAACGCGGGAGCGTGAAGCCGCCATTTCCATGGCCCGCAGCAGACT GTCCGGCGGTCCCGGTCCGGAATGGATCGACGGCCGTCCTCACTGCCGCGAGTGCGGAGAAGAAATTCCTGCCGCACGTA TCAATGCCCTGCCCAACTGCAGCCTGTGCCGCGATTGTCAGCAGGAAATGGAAAATAACTGA
Upstream 100 bases:
>100_bases ACGCAGCCCGCACTGCACTTTTATCTTGACGTTGGCGCTGTAATATGATGCTAGGCTTTTTTTAAATTGATATCCCCCCG GATATGCCAAGGAGAACCAC
Downstream 100 bases:
>100_bases TTCACAGACGACAACACCGCTGCGCCCTGAGGCTTTTCAGAATGCTCTGTTTTTAAAAGCGCCTTGCCCGATCATTGCAT TTCCTGTATTGCCAATATTC
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: TraR/DksA Family Transcriptional Regulator; C4-Type Zinc Finger DksA/TraR Family Protein; Conserved Domain Protein
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN
Sequences:
>Translated_73_residues MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN >Mature_72_residues PDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8164; Mature: 8033
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNC CCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCC SLCRDCQQEMENN HHHHHHHHHHCCC >Mature Secondary Structure PDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNC CCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCC SLCRDCQQEMENN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA