Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357562

Identifier: 78357562

GI number: 78357562

Start: 2540665

End: 2540886

Strand: Direct

Name: 78357562

Synonym: Dde_2519

Alternate gene names: NA

Gene position: 2540665-2540886 (Clockwise)

Preceding gene: 78357561

Following gene: 78357563

Centisome position: 68.11

GC content: 59.91

Gene sequence:

>222_bases
ATGCCCGATATGTTCGATCAGGCCAGCGATCTGGAAACGCGGGAGCGTGAAGCCGCCATTTCCATGGCCCGCAGCAGACT
GTCCGGCGGTCCCGGTCCGGAATGGATCGACGGCCGTCCTCACTGCCGCGAGTGCGGAGAAGAAATTCCTGCCGCACGTA
TCAATGCCCTGCCCAACTGCAGCCTGTGCCGCGATTGTCAGCAGGAAATGGAAAATAACTGA

Upstream 100 bases:

>100_bases
ACGCAGCCCGCACTGCACTTTTATCTTGACGTTGGCGCTGTAATATGATGCTAGGCTTTTTTTAAATTGATATCCCCCCG
GATATGCCAAGGAGAACCAC

Downstream 100 bases:

>100_bases
TTCACAGACGACAACACCGCTGCGCCCTGAGGCTTTTCAGAATGCTCTGTTTTTAAAAGCGCCTTGCCCGATCATTGCAT
TTCCTGTATTGCCAATATTC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: TraR/DksA Family Transcriptional Regulator; C4-Type Zinc Finger DksA/TraR Family Protein; Conserved Domain Protein

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN

Sequences:

>Translated_73_residues
MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN
>Mature_72_residues
PDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNCSLCRDCQQEMENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8164; Mature: 8033

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNC
CCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCC
SLCRDCQQEMENN
HHHHHHHHHHCCC
>Mature Secondary Structure 
PDMFDQASDLETREREAAISMARSRLSGGPGPEWIDGRPHCRECGEEIPAARINALPNC
CCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCC
SLCRDCQQEMENN
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA