Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357558
Identifier: 78357558
GI number: 78357558
Start: 2535790
End: 2537091
Strand: Direct
Name: 78357558
Synonym: Dde_2515
Alternate gene names: NA
Gene position: 2535790-2537091 (Clockwise)
Preceding gene: 78357557
Following gene: 78357560
Centisome position: 67.98
GC content: 57.91
Gene sequence:
>1302_bases GTGACCGGCCCGGACTCGTTATTGCCGCTTATCAAGCTGGCTGCCGCTTTCATCATCATGCTGCTCGCCATCCGCTTCAG GGTGAATCTGGGGCTTTCCATTATCAGCGGCGGTGCCGCCGTAGGGCTGTTTTTCGGTCTGGCTCCGGATATGTGGCTGC CCACGGTATTCACGGGGCTGACCAGCCCGCAGACCCTCATGCTGGCGGCCATAGTGCTGCTTATCCTGCTGCTCAGCGAT GTTCTGGAAAAATCAGGCCAGACCCTGCGTCTTATGGATGCGCTGTCCGGCTATCTGAAAAACCCGCGCCTGCGGCTGGT TTTCTTCCCCATGCTTATAGGACTGCTGCCCATGCCGGGCGGTGCTGTTTTTTCGGCCCCCATGATAGGTGCCGTGGCCA GCCGCATGCAGGTTTCAAAAGACACGCTGGCTGCGCTCAACTACTGGTACCGGCACGTATGGGAAACATGGTGGCCGCTG TATCCGGGCATCATTCTGGCGGCATCGCTCTCGGGCATTCCCATAACCACCATCTGCGCCTTCGGTTTGCCGGGCATGGC AATCATGCTGGCCGCAGGATGGTTTTTCATGCTGAGACCGGCGGTACTTTCTCTTCCGCCTGCCACGGTGCAGACAGACA GTACCGTGACGGCAAGCACGCCGAAAGCGGTTCTGCGTCAGGGGCTGCCTTTGCTGGTCGCCATCGGCGGTTCTGTGCTG CTTGAAACGGTACTGGCTTTTTCAGCGCAGGGCATTCCTTTTGAATCAGGCGTCATTGCCGCACTGGCTGCAGGCATACT GACTGCAGCCGTACAGAATAAAGGCAGCGCCGGTATTCTGGCGGCATCGCTGCGCCACAGACATCTGTGGCAGATGGTGC TCGTCATTGCCGCCATATTTGTTTTCAAGGAGATGCTGAACACCACAGGGGCGGTACATCAGCTGGCGCAGCTGGCAGGC GGACGCACAGCCCTTACGGTAAGCTGTATTTTCATGCCTTTTATTGTCGGGGCGGTATCGGGCATTACCATGGCCTATGT GGGGGCCACATTTCCTCTTATCGTGTCACTGGCCGTTCAGGCCGGTCTGCAGGATTCTCTGACAGCCTATGTCATGCTGG CCATATTTTCCGGATTCACCGGCATCATGGCAACGCCGCTGCATGTCTGCTTTGTGCTCACATGCCAGTATTTTCACTGC ACCCTGAGCAAAGCGTGGCGCCATGTGGCACTGCCCTGCCTGCTGCTGTTCTGCAGCGGACTTGTATACCATGGCCTGCT GCTTTTATGGCTCAAGCCCTGA
Upstream 100 bases:
>100_bases TCATGTTACGTCACAGCCGTAACCGTCGCTTTTTGCAACACGCCTGCGTGCAGCGGCCCGGAGCCGCGCCGCTGACCTTC CACACATGAGGCAAACCGCC
Downstream 100 bases:
>100_bases ACCTCAGCGCCACGAACGCCGCTGCATGCGCCGCAGGATAACTCTGCTTTTGGCTGTGACATAACCGGAATCCGAAACCG GAGAATACCGCCGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTGPDSLLPLIKLAAAFIIMLLAIRFRVNLGLSIISGGAAVGLFFGLAPDMWLPTVFTGLTSPQTLMLAAIVLLILLLSD VLEKSGQTLRLMDALSGYLKNPRLRLVFFPMLIGLLPMPGGAVFSAPMIGAVASRMQVSKDTLAALNYWYRHVWETWWPL YPGIILAASLSGIPITTICAFGLPGMAIMLAAGWFFMLRPAVLSLPPATVQTDSTVTASTPKAVLRQGLPLLVAIGGSVL LETVLAFSAQGIPFESGVIAALAAGILTAAVQNKGSAGILAASLRHRHLWQMVLVIAAIFVFKEMLNTTGAVHQLAQLAG GRTALTVSCIFMPFIVGAVSGITMAYVGATFPLIVSLAVQAGLQDSLTAYVMLAIFSGFTGIMATPLHVCFVLTCQYFHC TLSKAWRHVALPCLLLFCSGLVYHGLLLLWLKP
Sequences:
>Translated_433_residues MTGPDSLLPLIKLAAAFIIMLLAIRFRVNLGLSIISGGAAVGLFFGLAPDMWLPTVFTGLTSPQTLMLAAIVLLILLLSD VLEKSGQTLRLMDALSGYLKNPRLRLVFFPMLIGLLPMPGGAVFSAPMIGAVASRMQVSKDTLAALNYWYRHVWETWWPL YPGIILAASLSGIPITTICAFGLPGMAIMLAAGWFFMLRPAVLSLPPATVQTDSTVTASTPKAVLRQGLPLLVAIGGSVL LETVLAFSAQGIPFESGVIAALAAGILTAAVQNKGSAGILAASLRHRHLWQMVLVIAAIFVFKEMLNTTGAVHQLAQLAG GRTALTVSCIFMPFIVGAVSGITMAYVGATFPLIVSLAVQAGLQDSLTAYVMLAIFSGFTGIMATPLHVCFVLTCQYFHC TLSKAWRHVALPCLLLFCSGLVYHGLLLLWLKP >Mature_432_residues TGPDSLLPLIKLAAAFIIMLLAIRFRVNLGLSIISGGAAVGLFFGLAPDMWLPTVFTGLTSPQTLMLAAIVLLILLLSDV LEKSGQTLRLMDALSGYLKNPRLRLVFFPMLIGLLPMPGGAVFSAPMIGAVASRMQVSKDTLAALNYWYRHVWETWWPLY PGIILAASLSGIPITTICAFGLPGMAIMLAAGWFFMLRPAVLSLPPATVQTDSTVTASTPKAVLRQGLPLLVAIGGSVLL ETVLAFSAQGIPFESGVIAALAAGILTAAVQNKGSAGILAASLRHRHLWQMVLVIAAIFVFKEMLNTTGAVHQLAQLAGG RTALTVSCIFMPFIVGAVSGITMAYVGATFPLIVSLAVQAGLQDSLTAYVMLAIFSGFTGIMATPLHVCFVLTCQYFHCT LSKAWRHVALPCLLLFCSGLVYHGLLLLWLKP
Specific function: Unknown
COG id: COG1906
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46022; Mature: 45891
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPDSLLPLIKLAAAFIIMLLAIRFRVNLGLSIISGGAAVGLFFGLAPDMWLPTVFTGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHCCCCHHHHHHHHCC TSPQTLMLAAIVLLILLLSDVLEKSGQTLRLMDALSGYLKNPRLRLVFFPMLIGLLPMPG CCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCC GAVFSAPMIGAVASRMQVSKDTLAALNYWYRHVWETWWPLYPGIILAASLSGIPITTICA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGLPGMAIMLAAGWFFMLRPAVLSLPPATVQTDSTVTASTPKAVLRQGLPLLVAIGGSVL HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCEEEHHHHHHH LETVLAFSAQGIPFESGVIAALAAGILTAAVQNKGSAGILAASLRHRHLWQMVLVIAAIF HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFKEMLNTTGAVHQLAQLAGGRTALTVSCIFMPFIVGAVSGITMAYVGATFPLIVSLAVQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLQDSLTAYVMLAIFSGFTGIMATPLHVCFVLTCQYFHCTLSKAWRHVALPCLLLFCSG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVYHGLLLLWLKP HHHHHHHHHHCCC >Mature Secondary Structure TGPDSLLPLIKLAAAFIIMLLAIRFRVNLGLSIISGGAAVGLFFGLAPDMWLPTVFTGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHCCCCHHHHHHHHCC TSPQTLMLAAIVLLILLLSDVLEKSGQTLRLMDALSGYLKNPRLRLVFFPMLIGLLPMPG CCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCC GAVFSAPMIGAVASRMQVSKDTLAALNYWYRHVWETWWPLYPGIILAASLSGIPITTICA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGLPGMAIMLAAGWFFMLRPAVLSLPPATVQTDSTVTASTPKAVLRQGLPLLVAIGGSVL HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCEEEHHHHHHH LETVLAFSAQGIPFESGVIAALAAGILTAAVQNKGSAGILAASLRHRHLWQMVLVIAAIF HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFKEMLNTTGAVHQLAQLAGGRTALTVSCIFMPFIVGAVSGITMAYVGATFPLIVSLAVQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLQDSLTAYVMLAIFSGFTGIMATPLHVCFVLTCQYFHCTLSKAWRHVALPCLLLFCSG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVYHGLLLLWLKP HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA