| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355935
Identifier: 78355935
GI number: 78355935
Start: 917947
End: 918420
Strand: Direct
Name: 78355935
Synonym: Dde_0888
Alternate gene names: NA
Gene position: 917947-918420 (Clockwise)
Preceding gene: 78355934
Following gene: 78355936
Centisome position: 24.61
GC content: 59.7
Gene sequence:
>474_bases ATGAAAAGCCCCACAGTGCTGTGTCTTGATATAGGCAGCGGAACGCAGGACGTGCTCTACCACATTCCGGGCATCGAGCC GGAAAACAGACCGAAATTTGTGCTGCCCGCACCTGCGCGTATGGTCGCGCGCAGGCTTGCGGCGCTTACCGCGGCCGGCA GTGCGGTATATCTGCATGGCAGCAACATGGGCGGCGGTTTTTTCGGCGCTGTCAAAAAGCACCTTGCGGCCGGTCTTTCG GTGTGCGCGCATCCTGAAGCGGCAGCCGCCATACATGACAACCCCGCGCGGGTGCAGATGCTGGGTGTGGAAATTTCCGG ATCATGCCCCGGCGGATATGTGCCGGTGCATCTGTCCGATTATGACGCGGCGTTCTGGCAGGGTTTTCTGGGAATGGCGG GGCTTGAAATGCCCGATACCGTGGTGGCTGCCGCTCAGGACCATGGTTTTTTTCCCGATAGCTCCACCATTTGA
Upstream 100 bases:
>100_bases CGCAGGAGCCGTTGCGCTGCGCGGACCGAACGGCTAGGATGCCTCGCTGCGGCGGTTGTGCCGTGCTGTTGTATGCGACC CCCCCCAAGGAGAAAGACAA
Downstream 100 bases:
>100_bases AAAAAGACAACCCGTCTCTCCAGAGTGATTCTCTGGGGTGACGGGTTTTCTTTTTCCCCTTGTATTCAAAGGGTTTCGGC CGTTTTGACATCTTTCAGGA
Product: pyruvate formate-lyase activating enzyme
Products: NA
Alternate protein names: Domain Of Unkown Function; Actin-Like ATPase; Pyruvate Format-Lyase Activating
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI
Sequences:
>Translated_157_residues MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI >Mature_157_residues MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI
Specific function: Unknown
COG id: COG4012
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16301; Mature: 16301
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHG CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEC SNMGGGFFGAVKKHLAAGLSVCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSD CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEECC YDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHG CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEC SNMGGGFFGAVKKHLAAGLSVCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSD CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEECC YDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA