Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78355935

Identifier: 78355935

GI number: 78355935

Start: 917947

End: 918420

Strand: Direct

Name: 78355935

Synonym: Dde_0888

Alternate gene names: NA

Gene position: 917947-918420 (Clockwise)

Preceding gene: 78355934

Following gene: 78355936

Centisome position: 24.61

GC content: 59.7

Gene sequence:

>474_bases
ATGAAAAGCCCCACAGTGCTGTGTCTTGATATAGGCAGCGGAACGCAGGACGTGCTCTACCACATTCCGGGCATCGAGCC
GGAAAACAGACCGAAATTTGTGCTGCCCGCACCTGCGCGTATGGTCGCGCGCAGGCTTGCGGCGCTTACCGCGGCCGGCA
GTGCGGTATATCTGCATGGCAGCAACATGGGCGGCGGTTTTTTCGGCGCTGTCAAAAAGCACCTTGCGGCCGGTCTTTCG
GTGTGCGCGCATCCTGAAGCGGCAGCCGCCATACATGACAACCCCGCGCGGGTGCAGATGCTGGGTGTGGAAATTTCCGG
ATCATGCCCCGGCGGATATGTGCCGGTGCATCTGTCCGATTATGACGCGGCGTTCTGGCAGGGTTTTCTGGGAATGGCGG
GGCTTGAAATGCCCGATACCGTGGTGGCTGCCGCTCAGGACCATGGTTTTTTTCCCGATAGCTCCACCATTTGA

Upstream 100 bases:

>100_bases
CGCAGGAGCCGTTGCGCTGCGCGGACCGAACGGCTAGGATGCCTCGCTGCGGCGGTTGTGCCGTGCTGTTGTATGCGACC
CCCCCCAAGGAGAAAGACAA

Downstream 100 bases:

>100_bases
AAAAAGACAACCCGTCTCTCCAGAGTGATTCTCTGGGGTGACGGGTTTTCTTTTTCCCCTTGTATTCAAAGGGTTTCGGC
CGTTTTGACATCTTTCAGGA

Product: pyruvate formate-lyase activating enzyme

Products: NA

Alternate protein names: Domain Of Unkown Function; Actin-Like ATPase; Pyruvate Format-Lyase Activating

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS
VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI

Sequences:

>Translated_157_residues
MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS
VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI
>Mature_157_residues
MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHGSNMGGGFFGAVKKHLAAGLS
VCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSDYDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI

Specific function: Unknown

COG id: COG4012

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16301; Mature: 16301

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHG
CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEC
SNMGGGFFGAVKKHLAAGLSVCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEECC
YDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI
CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKSPTVLCLDIGSGTQDVLYHIPGIEPENRPKFVLPAPARMVARRLAALTAAGSAVYLHG
CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEC
SNMGGGFFGAVKKHLAAGLSVCAHPEAAAAIHDNPARVQMLGVEISGSCPGGYVPVHLSD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEECC
YDAAFWQGFLGMAGLEMPDTVVAAAQDHGFFPDSSTI
CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA