Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is ybaL [H]
Identifier: 78355774
GI number: 78355774
Start: 747495
End: 749507
Strand: Direct
Name: ybaL [H]
Synonym: Dde_0727
Alternate gene names: 78355774
Gene position: 747495-749507 (Clockwise)
Preceding gene: 78355773
Following gene: 78355790
Centisome position: 20.04
GC content: 61.35
Gene sequence:
>2013_bases ATGGAGTTACTAGGTAATCTTGTTCTTGTGCTTGCTTTTTCCGTGGGCGTGGTGCTGCTGGCCCAGAAATTCCGCATTCC CGCCATGGTGGGATTTCTGCTGGCGGGTGTGGCTGCCGGACCTCATGCACTGGGTATGGTTTCCGACGTGGCCGCAGTGG ACGTGCTGGCTGAAATAGGTGTTGTACTGCTGCTGTTTACACTGGGTATGGAATTTTCCATAGCCCGTCTGCGCGCATTG TTCCGCGTGGCGCTGCTGGGCGGCGGCACACAGGTGGCCGTCACCGCGCTGGCGGCCGGCAGTGTGGCACACTGGCTGCT GGGCATTGCATGGAACACCTCTGTTTTTATAGGTTTTCTCATTGCTCTTTCCAGTACGGCCATAGGTATCCGGCTGATGC GTGACAAAGGCGACGTGGAAACACCCCACGGTACGGCCGCGCTGGGCATACTTATTTTTCAGGATATGGCCGTGGTGCCC ATGATGCTGCTTGTACCGGTGCTTGCCGGGCAGGAGGGCAGCGTGGCGTGGGCGCTGGTCACGCTGACGGCCAAAACCGC TCTGGTGGTGGCCGGCGTGCTGTTTCTTGCCGTGCGCGGGGTGCCGCACCTGCTGCATTATGTGGCCCGCTGGCGTAACC GCGAGCTGTTTCTGCTCACGCTTCTTTCCATCTGCTTCGGGGTGGCGTGGGGCACCCATGCCGCCGGACTTTCGCTCGCG CTGGGCGCTTTTCTGGCGGGGCTGGTCATTTCCGGTTCGGAATACGAACACTACGCGGCTTCTCAGGTGCTGCCGCTGCA TGATCTTTTCATATGCTTCTTTTTCGTTTCGGTGGGTATGAGTCTGGATGTGGGGCTGGCACTGACAAATCCGCTCATCG TGCTGACGCTCACAGCGTTGCTCATGCTGTCCAAGTTTGTGCTTGTGACCGGCTCTGCCCTGCTGCCGGGTCTGGGGTTT GCCAGCGCGGTCATGACAGGCGGCATGCTGTGTCAGGTGGGTGAATTTTCCTTCATCCTTGCCCGGCTGGGTAACGAAGC CGGACTTTTTTCCGGCGAGGCCATGCAGCTGTTTCTGGCCTCTGCGGTGGTCACCATGTTTCTTACACCGTGGGCCGCGG GGTATGCGGGCCGTCTGGGACGTTTTCTGCGGCGCAGAGGCTCCTCGGCGCTGCGCGACCATACCGGCGTGACCAGCACG GCGCAAAGCGACCATCTGGTCATTATCGGATACGGTCCCGGCGGCAGACATCTGGCGCAGGCGGCCCGTCTGTGGAACAT CGATTACGTGGTCATAGACAGCAATCCCGACACGGTGCGTGATGAACGGGCGCGGGGTGTTCCCATCATGTTCGGCGATG CGGCCAGCGAAACCATGCTGGAACATGCGGGCGTGGAGCGGGCGCGCGCGGTTGCGGTGGTGGTTTCCGACCCTGTGGCG GCCCGGACAGTGACGGCGCTGGTGCGCGAATTGTCGCCCGATGTGCAGATAATCACCCGTGCGCGGTATCTTGGCGAATA TGACGGCATGCGCGAGGCAGGCGCCAATGATGTGGTGCCGGCCGAGATGGAGGCCTCGGTGGCCATGGTGGGACGTGTTC TGGAACGCTTTATGGTGGGCAGCGATGAACTGAAGGCGTTTCTTGAGCGCATCCGTGCCGAAGGCTACCAGATGGATGCC GAAGAGCTGGAAAAGCGCGGGAAGTATTCCTTCCTGCCCTTTATGCAGCTGCGGCAGGTACATGTGGAAGAGGGTTCCGC CGTGCAGGGCAAGACACTGGGTGAACTGCACATCCGCCGCAAGTACCGTGTGGCGGTGATGGCCGTGCGGCATAACGGCA CAGTGCTGCCTGTGCCGGGGGCCAAGACGGAACTGCTGCCCGGTGATGAGGTTCTGCTTTCGGGCTGCCCCGGCGATATC GGCATTGTGGCGTCCATGTTCAGCAAGGGCGGTGCGCCCCTGCCGGACGAAAACGATACAATACCCGCCGGAACGGCCTG CCCCGTGGAATAG
Upstream 100 bases:
>100_bases ATTTGTAGCATTTTGGAATGGCTGAAAAAAAACTGCTTCGGCACTATGGCCCGGTTTCGATTTGCGCTATGCTGATGGCC GATCATCCGGAGGACATCGT
Downstream 100 bases:
>100_bases CGGGAACGCGCGGCTGCGTTGCTTACTTTTAAAACGCATGAACCGGCACCTCTGACGGGGTGCCGGTGTTTTTTTCCGCA GCGGGCACAGCAGGTGCACG
Product: glutathione-regulated potassium-efflux system protein KefB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MELLGNLVLVLAFSVGVVLLAQKFRIPAMVGFLLAGVAAGPHALGMVSDVAAVDVLAEIGVVLLLFTLGMEFSIARLRAL FRVALLGGGTQVAVTALAAGSVAHWLLGIAWNTSVFIGFLIALSSTAIGIRLMRDKGDVETPHGTAALGILIFQDMAVVP MMLLVPVLAGQEGSVAWALVTLTAKTALVVAGVLFLAVRGVPHLLHYVARWRNRELFLLTLLSICFGVAWGTHAAGLSLA LGAFLAGLVISGSEYEHYAASQVLPLHDLFICFFFVSVGMSLDVGLALTNPLIVLTLTALLMLSKFVLVTGSALLPGLGF ASAVMTGGMLCQVGEFSFILARLGNEAGLFSGEAMQLFLASAVVTMFLTPWAAGYAGRLGRFLRRRGSSALRDHTGVTST AQSDHLVIIGYGPGGRHLAQAARLWNIDYVVIDSNPDTVRDERARGVPIMFGDAASETMLEHAGVERARAVAVVVSDPVA ARTVTALVRELSPDVQIITRARYLGEYDGMREAGANDVVPAEMEASVAMVGRVLERFMVGSDELKAFLERIRAEGYQMDA EELEKRGKYSFLPFMQLRQVHVEEGSAVQGKTLGELHIRRKYRVAVMAVRHNGTVLPVPGAKTELLPGDEVLLSGCPGDI GIVASMFSKGGAPLPDENDTIPAGTACPVE
Sequences:
>Translated_670_residues MELLGNLVLVLAFSVGVVLLAQKFRIPAMVGFLLAGVAAGPHALGMVSDVAAVDVLAEIGVVLLLFTLGMEFSIARLRAL FRVALLGGGTQVAVTALAAGSVAHWLLGIAWNTSVFIGFLIALSSTAIGIRLMRDKGDVETPHGTAALGILIFQDMAVVP MMLLVPVLAGQEGSVAWALVTLTAKTALVVAGVLFLAVRGVPHLLHYVARWRNRELFLLTLLSICFGVAWGTHAAGLSLA LGAFLAGLVISGSEYEHYAASQVLPLHDLFICFFFVSVGMSLDVGLALTNPLIVLTLTALLMLSKFVLVTGSALLPGLGF ASAVMTGGMLCQVGEFSFILARLGNEAGLFSGEAMQLFLASAVVTMFLTPWAAGYAGRLGRFLRRRGSSALRDHTGVTST AQSDHLVIIGYGPGGRHLAQAARLWNIDYVVIDSNPDTVRDERARGVPIMFGDAASETMLEHAGVERARAVAVVVSDPVA ARTVTALVRELSPDVQIITRARYLGEYDGMREAGANDVVPAEMEASVAMVGRVLERFMVGSDELKAFLERIRAEGYQMDA EELEKRGKYSFLPFMQLRQVHVEEGSAVQGKTLGELHIRRKYRVAVMAVRHNGTVLPVPGAKTELLPGDEVLLSGCPGDI GIVASMFSKGGAPLPDENDTIPAGTACPVE >Mature_670_residues MELLGNLVLVLAFSVGVVLLAQKFRIPAMVGFLLAGVAAGPHALGMVSDVAAVDVLAEIGVVLLLFTLGMEFSIARLRAL FRVALLGGGTQVAVTALAAGSVAHWLLGIAWNTSVFIGFLIALSSTAIGIRLMRDKGDVETPHGTAALGILIFQDMAVVP MMLLVPVLAGQEGSVAWALVTLTAKTALVVAGVLFLAVRGVPHLLHYVARWRNRELFLLTLLSICFGVAWGTHAAGLSLA LGAFLAGLVISGSEYEHYAASQVLPLHDLFICFFFVSVGMSLDVGLALTNPLIVLTLTALLMLSKFVLVTGSALLPGLGF ASAVMTGGMLCQVGEFSFILARLGNEAGLFSGEAMQLFLASAVVTMFLTPWAAGYAGRLGRFLRRRGSSALRDHTGVTST AQSDHLVIIGYGPGGRHLAQAARLWNIDYVVIDSNPDTVRDERARGVPIMFGDAASETMLEHAGVERARAVAVVVSDPVA ARTVTALVRELSPDVQIITRARYLGEYDGMREAGANDVVPAEMEASVAMVGRVLERFMVGSDELKAFLERIRAEGYQMDA EELEKRGKYSFLPFMQLRQVHVEEGSAVQGKTLGELHIRRKYRVAVMAVRHNGTVLPVPGAKTELLPGDEVLLSGCPGDI GIVASMFSKGGAPLPDENDTIPAGTACPVE
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=388, Percent_Identity=29.3814432989691, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1786685, Length=536, Percent_Identity=33.955223880597, Blast_Score=239, Evalue=6e-64, Organism=Escherichia coli, GI1786232, Length=549, Percent_Identity=30.6010928961749, Blast_Score=215, Evalue=6e-57, Organism=Escherichia coli, GI1789749, Length=511, Percent_Identity=29.9412915851272, Blast_Score=209, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322367, Length=383, Percent_Identity=25.065274151436, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 71049; Mature: 71049
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLGNLVLVLAFSVGVVLLAQKFRIPAMVGFLLAGVAAGPHALGMVSDVAAVDVLAEIG CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VVLLLFTLGMEFSIARLRALFRVALLGGGTQVAVTALAAGSVAHWLLGIAWNTSVFIGFL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IALSSTAIGIRLMRDKGDVETPHGTAALGILIFQDMAVVPMMLLVPVLAGQEGSVAWALV HHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TLTAKTALVVAGVLFLAVRGVPHLLHYVARWRNRELFLLTLLSICFGVAWGTHAAGLSLA EHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LGAFLAGLVISGSEYEHYAASQVLPLHDLFICFFFVSVGMSLDVGLALTNPLIVLTLTAL HHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHH LMLSKFVLVTGSALLPGLGFASAVMTGGMLCQVGEFSFILARLGNEAGLFSGEAMQLFLA HHHHHHHHHCCCHHHCCCCHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHH SAVVTMFLTPWAAGYAGRLGRFLRRRGSSALRDHTGVTSTAQSDHLVIIGYGPGGRHLAQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH AARLWNIDYVVIDSNPDTVRDERARGVPIMFGDAASETMLEHAGVERARAVAVVVSDPVA HHHHCCCEEEEECCCCCCCHHHHCCCCCEEECCCHHHHHHHHCCCHHHHEEEEEECCCHH ARTVTALVRELSPDVQIITRARYLGEYDGMREAGANDVVPAEMEASVAMVGRVLERFMVG HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC SDELKAFLERIRAEGYQMDAEELEKRGKYSFLPFMQLRQVHVEEGSAVQGKTLGELHIRR CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH KYRVAVMAVRHNGTVLPVPGAKTELLPGDEVLLSGCPGDIGIVASMFSKGGAPLPDENDT EEEEEEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCC IPAGTACPVE CCCCCCCCCC >Mature Secondary Structure MELLGNLVLVLAFSVGVVLLAQKFRIPAMVGFLLAGVAAGPHALGMVSDVAAVDVLAEIG CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VVLLLFTLGMEFSIARLRALFRVALLGGGTQVAVTALAAGSVAHWLLGIAWNTSVFIGFL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IALSSTAIGIRLMRDKGDVETPHGTAALGILIFQDMAVVPMMLLVPVLAGQEGSVAWALV HHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TLTAKTALVVAGVLFLAVRGVPHLLHYVARWRNRELFLLTLLSICFGVAWGTHAAGLSLA EHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LGAFLAGLVISGSEYEHYAASQVLPLHDLFICFFFVSVGMSLDVGLALTNPLIVLTLTAL HHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHH LMLSKFVLVTGSALLPGLGFASAVMTGGMLCQVGEFSFILARLGNEAGLFSGEAMQLFLA HHHHHHHHHCCCHHHCCCCHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHHH SAVVTMFLTPWAAGYAGRLGRFLRRRGSSALRDHTGVTSTAQSDHLVIIGYGPGGRHLAQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH AARLWNIDYVVIDSNPDTVRDERARGVPIMFGDAASETMLEHAGVERARAVAVVVSDPVA HHHHCCCEEEEECCCCCCCHHHHCCCCCEEECCCHHHHHHHHCCCHHHHEEEEEECCCHH ARTVTALVRELSPDVQIITRARYLGEYDGMREAGANDVVPAEMEASVAMVGRVLERFMVG HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC SDELKAFLERIRAEGYQMDAEELEKRGKYSFLPFMQLRQVHVEEGSAVQGKTLGELHIRR CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH KYRVAVMAVRHNGTVLPVPGAKTELLPGDEVLLSGCPGDIGIVASMFSKGGAPLPDENDT EEEEEEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCC IPAGTACPVE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]