| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355761
Identifier: 78355761
GI number: 78355761
Start: 732543
End: 733466
Strand: Direct
Name: 78355761
Synonym: Dde_0714
Alternate gene names: NA
Gene position: 732543-733466 (Clockwise)
Preceding gene: 78355760
Following gene: 78355762
Centisome position: 19.64
GC content: 59.31
Gene sequence:
>924_bases ATGACTATTTCATCGCGTGAAGACCTGCTGCGCTCGGAAGATGCCGCGCTGGCGTACGTTCTGCGGGAATGCTGGCCGGG CGGCGGCCGGTTTTGTCCGCGCTGCGGCGAAAGCCGTCTGTACGACCTTGCCGGAGGCCGGTCGCGCTGTGCGCGGTGCA AGTATACTTTTCAGGACTTCAGCGGCCGCTGGATAAACAACGGGGGGCTTTCGCCGCTGACGTGGCTGCGTCTGGCCGAT CTTTTCAGCCGTGAACCCACGGTGCATCAGATGGCCGTGGAGGCCGGGCTGTCGTATAACGCCACATACAAGGCCGTGAC CACCATGCGTTTTGCCATTCTGGCGCATGCCACGGACGCCGTGCAGCTGCTGGGGCCGGAAACAGGACTGGGCAGTTTTC TGCGCAACCGCAAACTGACCGGTGACCCTGATTCAGGCGGACGCGGCACGGTGCCCGTGTTCGGCATTCTGGAACGTAAC GGCTGGCTGTTTATCGACCTTGTATCGGGCATGTCGGCCGAAACAGTTTTTCATTTCAACCACAGCTTTCATCTGAAAGT GGAACGGGCGGGCAACCTTATATGGACTGACCGCTACCGGCACTATGATGCACTGGTTTTCTGCGGCGATGATTCGCTGC CGTATGAGTATCTGCGCAGGCATGACAGGCCTGTGGCGGTGGAATGCGGTACCGGATTCTGGGCATTTGCCGAAAAACGG CTGAAGCTGTTCAAGGGCATAACCCCCCGTCGTTTTCCGCTGTATCTCAAGGAACTGGAATTCAGGTATAACATGCGGCA CAGCGATATTTTTCCGGTACTTGTGCGCTATCTGTGCGATTTTGTACCTGATATGAATCCGGAAGGGGCGGCGGAGACCG CAGCCGGTGCTGCCCGCGGGCATGCGGCGGGGTCACGGGGCTGA
Upstream 100 bases:
>100_bases AGAACCGGCGGCGTTTCTGCGGCGTGTCGCGGCACTGCCGTAGCCGGCAGCGGTTGCTCCGTCGTTTGCTTTCGTGGCGT ATTCTGTATAGATAACTGGA
Downstream 100 bases:
>100_bases TACCGTCCGCCGGTGCCGGACCGTGAGTATGATTCTGTTCTGCTATTATTAACATATTGAATTAGCATCCATTGAAGCCT GTCCTGTGTGCCAGAAGTCA
Product: transposase
Products: NA
Alternate protein names: Transposase-Like Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTISSREDLLRSEDAALAYVLRECWPGGGRFCPRCGESRLYDLAGGRSRCARCKYTFQDFSGRWINNGGLSPLTWLRLAD LFSREPTVHQMAVEAGLSYNATYKAVTTMRFAILAHATDAVQLLGPETGLGSFLRNRKLTGDPDSGGRGTVPVFGILERN GWLFIDLVSGMSAETVFHFNHSFHLKVERAGNLIWTDRYRHYDALVFCGDDSLPYEYLRRHDRPVAVECGTGFWAFAEKR LKLFKGITPRRFPLYLKELEFRYNMRHSDIFPVLVRYLCDFVPDMNPEGAAETAAGAARGHAAGSRG
Sequences:
>Translated_307_residues MTISSREDLLRSEDAALAYVLRECWPGGGRFCPRCGESRLYDLAGGRSRCARCKYTFQDFSGRWINNGGLSPLTWLRLAD LFSREPTVHQMAVEAGLSYNATYKAVTTMRFAILAHATDAVQLLGPETGLGSFLRNRKLTGDPDSGGRGTVPVFGILERN GWLFIDLVSGMSAETVFHFNHSFHLKVERAGNLIWTDRYRHYDALVFCGDDSLPYEYLRRHDRPVAVECGTGFWAFAEKR LKLFKGITPRRFPLYLKELEFRYNMRHSDIFPVLVRYLCDFVPDMNPEGAAETAAGAARGHAAGSRG >Mature_306_residues TISSREDLLRSEDAALAYVLRECWPGGGRFCPRCGESRLYDLAGGRSRCARCKYTFQDFSGRWINNGGLSPLTWLRLADL FSREPTVHQMAVEAGLSYNATYKAVTTMRFAILAHATDAVQLLGPETGLGSFLRNRKLTGDPDSGGRGTVPVFGILERNG WLFIDLVSGMSAETVFHFNHSFHLKVERAGNLIWTDRYRHYDALVFCGDDSLPYEYLRRHDRPVAVECGTGFWAFAEKRL KLFKGITPRRFPLYLKELEFRYNMRHSDIFPVLVRYLCDFVPDMNPEGAAETAAGAARGHAAGSRG
Specific function: Unknown
COG id: COG3676
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34552; Mature: 34421
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISSREDLLRSEDAALAYVLRECWPGGGRFCPRCGESRLYDLAGGRSRCARCKYTFQDF CCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHCEEEHHCC SGRWINNGGLSPLTWLRLADLFSREPTVHQMAVEAGLSYNATYKAVTTMRFAILAHATDA CCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VQLLGPETGLGSFLRNRKLTGDPDSGGRGTVPVFGILERNGWLFIDLVSGMSAETVFHFN HHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEC HSFHLKVERAGNLIWTDRYRHYDALVFCGDDSLPYEYLRRHDRPVAVECGTGFWAFAEKR CEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHH LKLFKGITPRRFPLYLKELEFRYNMRHSDIFPVLVRYLCDFVPDMNPEGAAETAAGAARG HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC HAAGSRG CCCCCCC >Mature Secondary Structure TISSREDLLRSEDAALAYVLRECWPGGGRFCPRCGESRLYDLAGGRSRCARCKYTFQDF CCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHCEEEHHCC SGRWINNGGLSPLTWLRLADLFSREPTVHQMAVEAGLSYNATYKAVTTMRFAILAHATDA CCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VQLLGPETGLGSFLRNRKLTGDPDSGGRGTVPVFGILERNGWLFIDLVSGMSAETVFHFN HHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEC HSFHLKVERAGNLIWTDRYRHYDALVFCGDDSLPYEYLRRHDRPVAVECGTGFWAFAEKR CEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHH LKLFKGITPRRFPLYLKELEFRYNMRHSDIFPVLVRYLCDFVPDMNPEGAAETAAGAARG HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC HAAGSRG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA