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The map label for this gene is fdhD [H]

Identifier: 78355754

GI number: 78355754

Start: 724816

End: 725535

Strand: Direct

Name: fdhD [H]

Synonym: Dde_0707

Alternate gene names: 78355754

Gene position: 724816-725535 (Clockwise)

Preceding gene: 78355753

Following gene: 78355755

Centisome position: 19.43

GC content: 65.28

Gene sequence:

>720_bases
ATGTCGGGCACAGATGGCGGGGCTGTGCCCCGCAATGTGGGGGTGCGCCGCTACAGCGACGGCAGCTGGCACATGGTGGA
CGATGTTCTGAGCCGTGAAGTGCCGGTGAGCGTGCGTGTGGACGGCGGAGAACGGCACATGCTGTGGGCATGGCCCGAAA
ACCTGCACGATCTGGCGGCAGGTCATGCCCTGCTGGATATGGGGCTGTGCGGGGCGGCCGTGAAGGTGCAGCAGGTGGAA
GAGTTTTCGTTCCTTGTCTCTGCATCGGGTGAACAGCGGTGTCCGGCAGATGCCGATGCGGGAACCCTTGACGCGCAGTC
GCTGATGACGTGCATGGGTGACTTTATGGGCGCCGCCGGGCTGTGGGACGGCACGGGCTGTTTTCACCGTGCCGGAGTGC
TGGACGCCGCCAGCCGCACCGTGCTGCACCGTGCGGAAGATATCGGCAGGCACAATTGTATCGACAGGCTGGCCGGCTGG
GCTGCCCGGAAAAACGTCTGTCCTTCCGGTCTGGTCATGCTGGTCTCCGCGCGGGTTACGGCAAGCCTGTGCGCCAAGGC
CATGCGTGCAGGATTCCGGTTCATCGTCAGCCGGTCGGCCGTTACCACGGCCTCGGTGGACATGGCGGCTTCGGCCGGTG
TCACGCTGGTCGGCTTTGCCCGCGACAGGGAGCGGCGTTTCACCGTGTTTACCGATGCCGCAGCACGGGTGCTTGACTGA

Upstream 100 bases:

>100_bases
CCGTTCCTGTGCTGGATGATCTGGAATCGCTGGCACTGGATATCCTTGCCCGTGAACAGGGCTTTGTCCGGCCGACCCAG
TCTGCATGGGGGTTCTGATC

Downstream 100 bases:

>100_bases
TGAGCGCGCCGCACGCTGCCGTATCGGCGCCCGTGGGAGTGGTGCTTGCCGGCGGGCTGAGTGCGCGCATGGGCAGTGAT
AAGCGGGGCGTGCGGTTGTT

Product: formate dehydrogenase accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSGTDGGAVPRNVGVRRYSDGSWHMVDDVLSREVPVSVRVDGGERHMLWAWPENLHDLAAGHALLDMGLCGAAVKVQQVE
EFSFLVSASGEQRCPADADAGTLDAQSLMTCMGDFMGAAGLWDGTGCFHRAGVLDAASRTVLHRAEDIGRHNCIDRLAGW
AARKNVCPSGLVMLVSARVTASLCAKAMRAGFRFIVSRSAVTTASVDMAASAGVTLVGFARDRERRFTVFTDAAARVLD

Sequences:

>Translated_239_residues
MSGTDGGAVPRNVGVRRYSDGSWHMVDDVLSREVPVSVRVDGGERHMLWAWPENLHDLAAGHALLDMGLCGAAVKVQQVE
EFSFLVSASGEQRCPADADAGTLDAQSLMTCMGDFMGAAGLWDGTGCFHRAGVLDAASRTVLHRAEDIGRHNCIDRLAGW
AARKNVCPSGLVMLVSARVTASLCAKAMRAGFRFIVSRSAVTTASVDMAASAGVTLVGFARDRERRFTVFTDAAARVLD
>Mature_238_residues
SGTDGGAVPRNVGVRRYSDGSWHMVDDVLSREVPVSVRVDGGERHMLWAWPENLHDLAAGHALLDMGLCGAAVKVQQVEE
FSFLVSASGEQRCPADADAGTLDAQSLMTCMGDFMGAAGLWDGTGCFHRAGVLDAASRTVLHRAEDIGRHNCIDRLAGWA
ARKNVCPSGLVMLVSARVTASLCAKAMRAGFRFIVSRSAVTTASVDMAASAGVTLVGFARDRERRFTVFTDAAARVLD

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 25442; Mature: 25311

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTDGGAVPRNVGVRRYSDGSWHMVDDVLSREVPVSVRVDGGERHMLWAWPENLHDLAA
CCCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHH
GHALLDMGLCGAAVKVQQVEEFSFLVSASGEQRCPADADAGTLDAQSLMTCMGDFMGAAG
HHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
LWDGTGCFHRAGVLDAASRTVLHRAEDIGRHNCIDRLAGWAARKNVCPSGLVMLVSARVT
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ASLCAKAMRAGFRFIVSRSAVTTASVDMAASAGVTLVGFARDRERRFTVFTDAAARVLD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHHHCC
>Mature Secondary Structure 
SGTDGGAVPRNVGVRRYSDGSWHMVDDVLSREVPVSVRVDGGERHMLWAWPENLHDLAA
CCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHH
GHALLDMGLCGAAVKVQQVEEFSFLVSASGEQRCPADADAGTLDAQSLMTCMGDFMGAAG
HHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
LWDGTGCFHRAGVLDAASRTVLHRAEDIGRHNCIDRLAGWAARKNVCPSGLVMLVSARVT
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ASLCAKAMRAGFRFIVSRSAVTTASVDMAASAGVTLVGFARDRERRFTVFTDAAARVLD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]