| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355724
Identifier: 78355724
GI number: 78355724
Start: 693320
End: 693988
Strand: Direct
Name: 78355724
Synonym: Dde_0677
Alternate gene names: NA
Gene position: 693320-693988 (Clockwise)
Preceding gene: 78355722
Following gene: 78355731
Centisome position: 18.59
GC content: 63.98
Gene sequence:
>669_bases ATGAGTCCGTACCCCGCTGAGAATGCCGCGTTCCGGCAGTCCGTATTGGATGCGTTGGAGCTGGCCGATGCCCTGTTCAG GGGGCTGGATTCGCAACGCTGCGCTGAACTGTGCCGTGAAAACCTTTCCGGAAGGTTCGGCACACTGCCCGCACAGGCGG CCCACCTTACTGATGCCCTTGCCGCTCTGCAAGCCCGCCTGCCCGCCGCAGACGGCAGTTCTGATACCGCGGCATTCTGC GATGCCCTGCAGGCGGAACATGTCCGCCTGTTCATCAATGATAAAGCCGGCGCCCCCGCACTGCCTTATGAATCTCTGTA TCCCGACCCGGCGGACGGCGTGGAACCGCGCATGATGGGGGCTGCGGCTCTGGCCATGCAGAAACGCCTGCAGGCCGCCG GGCTGGAGCGGGCTGTTTCTGCCAACGAACCGCCCGACCACCTGTGCATTGAGCTGGAATACCTGTACTATCTGCTTTCG CGCGCATGGAACGAGGCAGATACGGCAGCACAGGATGCGGCGGCCGATTTCGCCGCCGGTGTGCTGCTGCCGTGGACACG CCGTCTGCGTCTTGCCGTGTGCAGAGCCGATACCACGGGGGTGTATGCCGCGGCTGCACAGGTGCTGCTGGCCGTGCTTA ATCTGGTGGCATCGCTGCGGGTGCAGTAA
Upstream 100 bases:
>100_bases TTCTTCCATTTTCTGTGCCCCGGTAATCTGTTGCCCCTCATGCGCAGCTGACGTACTGTCAGTGCACACGGTGTCTTTAT TTTTTTCAGGAGGTTGCCGC
Downstream 100 bases:
>100_bases CTGTCCTGCATTCTACCGCGGCTTTTCTGCAGCGGCAGCCGCTTCCTGCGTGTGAGGCCCGCTTATACCCCATGCGGGTA CGTTCGTCATCCGGAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSPYPAENAAFRQSVLDALELADALFRGLDSQRCAELCRENLSGRFGTLPAQAAHLTDALAALQARLPAADGSSDTAAFC DALQAEHVRLFINDKAGAPALPYESLYPDPADGVEPRMMGAAALAMQKRLQAAGLERAVSANEPPDHLCIELEYLYYLLS RAWNEADTAAQDAAADFAAGVLLPWTRRLRLAVCRADTTGVYAAAAQVLLAVLNLVASLRVQ
Sequences:
>Translated_222_residues MSPYPAENAAFRQSVLDALELADALFRGLDSQRCAELCRENLSGRFGTLPAQAAHLTDALAALQARLPAADGSSDTAAFC DALQAEHVRLFINDKAGAPALPYESLYPDPADGVEPRMMGAAALAMQKRLQAAGLERAVSANEPPDHLCIELEYLYYLLS RAWNEADTAAQDAAADFAAGVLLPWTRRLRLAVCRADTTGVYAAAAQVLLAVLNLVASLRVQ >Mature_221_residues SPYPAENAAFRQSVLDALELADALFRGLDSQRCAELCRENLSGRFGTLPAQAAHLTDALAALQARLPAADGSSDTAAFCD ALQAEHVRLFINDKAGAPALPYESLYPDPADGVEPRMMGAAALAMQKRLQAAGLERAVSANEPPDHLCIELEYLYYLLSR AWNEADTAAQDAAADFAAGVLLPWTRRLRLAVCRADTTGVYAAAAQVLLAVLNLVASLRVQ
Specific function: Unknown
COG id: COG3381
COG function: function code R; Uncharacterized component of anaerobic dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23713; Mature: 23582
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYPAENAAFRQSVLDALELADALFRGLDSQRCAELCRENLSGRFGTLPAQAAHLTDAL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AALQARLPAADGSSDTAAFCDALQAEHVRLFINDKAGAPALPYESLYPDPADGVEPRMMG HHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHH AAALAMQKRLQAAGLERAVSANEPPDHLCIELEYLYYLLSRAWNEADTAAQDAAADFAAG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VLLPWTRRLRLAVCRADTTGVYAAAAQVLLAVLNLVASLRVQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPYPAENAAFRQSVLDALELADALFRGLDSQRCAELCRENLSGRFGTLPAQAAHLTDAL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AALQARLPAADGSSDTAAFCDALQAEHVRLFINDKAGAPALPYESLYPDPADGVEPRMMG HHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHH AAALAMQKRLQAAGLERAVSANEPPDHLCIELEYLYYLLSRAWNEADTAAQDAAADFAAG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VLLPWTRRLRLAVCRADTTGVYAAAAQVLLAVLNLVASLRVQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA