| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355540
Identifier: 78355540
GI number: 78355540
Start: 500718
End: 501092
Strand: Direct
Name: 78355540
Synonym: Dde_0493
Alternate gene names: NA
Gene position: 500718-501092 (Clockwise)
Preceding gene: 78355539
Following gene: 78355541
Centisome position: 13.42
GC content: 60.8
Gene sequence:
>375_bases ATGAGCGAGTATAAACGTGTTCCGTATCCTCAGGCCGGTCAGGCTCCCGACGGTTCGTATTACAGCGGGCAGATGCCTCA GCAGGGCTATGCACAGGCGCAGGCCGGCATGCAGTACGGCGCCGGTGCGGCGGTTCCTTCCTCTCCTTCCGCCGCTCCCG CTTCCGGGCTGTCTTCGTGGGTCAATGTGTCTAACCCCGACTACCTGAAAGGGCTGGCACTGGGAGCGGGTGTCGCTCTG GTTGCCTGCAACCCAGCAGTGCGGCAGGCCATTATTTCCGGTGCTGTCAAAGTATGGTCGGCAGTGCAGGGCGGGGTGGA AGAGGTAAAGGAACAGATTCAGGACGTGAAAGCGGAGCTCAGCTACAAGGAGTAG
Upstream 100 bases:
>100_bases ACCCCGCAGGCAGTCATCGGCAAAAGGTGCCGAAAAGAAAGCAACATCTGCTGACAACGCCGGTACGCATGCAGCCGGAA CAGAATAACGAGGTGATTCC
Downstream 100 bases:
>100_bases CCCTATGGCCGGTTCGCGACCTTATACCGGTGCGGAGATGACCCCCGCTGTGGTTCTGCGCAATAAGAAGACGCTGGCAA AGACCGGCATGGCGGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSEYKRVPYPQAGQAPDGSYYSGQMPQQGYAQAQAGMQYGAGAAVPSSPSAAPASGLSSWVNVSNPDYLKGLALGAGVAL VACNPAVRQAIISGAVKVWSAVQGGVEEVKEQIQDVKAELSYKE
Sequences:
>Translated_124_residues MSEYKRVPYPQAGQAPDGSYYSGQMPQQGYAQAQAGMQYGAGAAVPSSPSAAPASGLSSWVNVSNPDYLKGLALGAGVAL VACNPAVRQAIISGAVKVWSAVQGGVEEVKEQIQDVKAELSYKE >Mature_123_residues SEYKRVPYPQAGQAPDGSYYSGQMPQQGYAQAQAGMQYGAGAAVPSSPSAAPASGLSSWVNVSNPDYLKGLALGAGVALV ACNPAVRQAIISGAVKVWSAVQGGVEEVKEQIQDVKAELSYKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12807; Mature: 12676
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYKRVPYPQAGQAPDGSYYSGQMPQQGYAQAQAGMQYGAGAAVPSSPSAAPASGLSSW CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VNVSNPDYLKGLALGAGVALVACNPAVRQAIISGAVKVWSAVQGGVEEVKEQIQDVKAEL CCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC SYKE CCCC >Mature Secondary Structure SEYKRVPYPQAGQAPDGSYYSGQMPQQGYAQAQAGMQYGAGAAVPSSPSAAPASGLSSW CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VNVSNPDYLKGLALGAGVALVACNPAVRQAIISGAVKVWSAVQGGVEEVKEQIQDVKAEL CCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC SYKE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA