| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355531
Identifier: 78355531
GI number: 78355531
Start: 493258
End: 494592
Strand: Direct
Name: 78355531
Synonym: Dde_0484
Alternate gene names: NA
Gene position: 493258-494592 (Clockwise)
Preceding gene: 78355530
Following gene: 78355532
Centisome position: 13.22
GC content: 60.9
Gene sequence:
>1335_bases ATGTCATATTCCGCAGCCGTGGCAGAGTGCCGTGCGCGTATGGTCAAAGCCCGCATACGGCTTGTCATGGCCCATCCCTT TTTCGGAACACTGTGCCTCAGAATGAATCCGGAGCCTGACATCCGCTGCCGCACCGCATGGACTGACGGTACGCGTCTGG CTTTTAATCCGTACTATGTCAGAGGACTGTCCGACGCCGCTTTGCAGGGATTGCTGGCGCATACGGTGATGCATCCTGCC TGCCAGCACCATATGCGCCGCGGCAGACGTGATGCCGACCTGTGGAACAGGGCCTGTGACTATGCCATCAACTGGGTGCT GACAGATGCCGGCATCACGCTTCCTCCCGGATATCTTGATGATTCACGGTATCGCGGGCTGAGTGCCGAAGCGATTTATG CCGAGCTTTCGGCGGGCATGGGGGGCGACGGCATGCGCGGAGACAATAACACCGCCGACGGTCCCGAAAAGGAAGAGACG CAGGCGGATGAAGGCGCTGCCGCGCAGGCGCAGACCGGCGACGGTGAAGAATCTTCCGGCAGTGATGAAGGAGCCGGTGC AGAGCAGGGCGACGGGGCAGAGGTTCAGCCTTTGCCACAGGATACCGGTGACGACCATGATGCGTCGCAGGGGGATCCCG GCGGTTCGGGCGAGGTGCGCGATGCCGTTTCGGACAGCGGATCGTCGAGTCCTGCGGGTACGCCCCCCGCTGATGAAAAC TGGCTGGTGGCACTGGCGCAGGCGGCGGAGCAGGCCCGCGGCAGCGGTGATCTGCCCGGCGGGCTTGAACGCCTTGTCCG CACGGTGCTTGCACCTTCACTGGACTGGCGCATGCTTCTCGACAGATTTCTGCAGCACCGTGCCCGCAACGATTATACAT GGTTTCCGCCCAGCCGCAGGCATGTGCACATGGGCATGTACCTGCCGTCGCTGGCGCAGGTCAGTCTGGCAGAGGTGATA CTTGCCATTGATACGTCGGGCAGTATCGCCCCCCGTGAACTTGACCTTTTCGCTGCGGAGCTTTCGTCGCTGCTGGAGCA GTACGAAACCACCGTGCGTGTCATTTTCTGCGATACGCAGATAACAGGAGAACAGGTGTGCGGCAGGCAGGACCTGCCGC TCAGTCTGGCGCCGGAAGGCGGCGGCGGAACAGATTACCGTCCCGTCTTCCGCCATGTGGATACCATGGGATATCTGCCT TCCTGTCTTGTATATCTCACCGACCTTGAGTGCATGCATTTTCCGGAGGACGAGCCGCCTTATCCTGTGTTGTGGGTGCA GACCGGCGGGCAGGAAAGGTCTGTTCCTTTCGGCGATATAATTCACATGCACTAG
Upstream 100 bases:
>100_bases GGTGCGGGGAGCGGCCGCGCGTGACAAAGCCGTGCTCGATTCCGGAGCCTTCACCCGCTGGGCCACTGCCAATGCGCAGG TGCTTTTTTAAGGGGCCTGT
Downstream 100 bases:
>100_bases GAGAGCCTGCATGATTATCGAATGGCGTATTGTTAAAAAACGGGGGAATTACCGGCCCGAGCTCTGCTACAGCATCACGC TGGAACCGTTCGAACGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSYSAAVAECRARMVKARIRLVMAHPFFGTLCLRMNPEPDIRCRTAWTDGTRLAFNPYYVRGLSDAALQGLLAHTVMHPA CQHHMRRGRRDADLWNRACDYAINWVLTDAGITLPPGYLDDSRYRGLSAEAIYAELSAGMGGDGMRGDNNTADGPEKEET QADEGAAAQAQTGDGEESSGSDEGAGAEQGDGAEVQPLPQDTGDDHDASQGDPGGSGEVRDAVSDSGSSSPAGTPPADEN WLVALAQAAEQARGSGDLPGGLERLVRTVLAPSLDWRMLLDRFLQHRARNDYTWFPPSRRHVHMGMYLPSLAQVSLAEVI LAIDTSGSIAPRELDLFAAELSSLLEQYETTVRVIFCDTQITGEQVCGRQDLPLSLAPEGGGGTDYRPVFRHVDTMGYLP SCLVYLTDLECMHFPEDEPPYPVLWVQTGGQERSVPFGDIIHMH
Sequences:
>Translated_444_residues MSYSAAVAECRARMVKARIRLVMAHPFFGTLCLRMNPEPDIRCRTAWTDGTRLAFNPYYVRGLSDAALQGLLAHTVMHPA CQHHMRRGRRDADLWNRACDYAINWVLTDAGITLPPGYLDDSRYRGLSAEAIYAELSAGMGGDGMRGDNNTADGPEKEET QADEGAAAQAQTGDGEESSGSDEGAGAEQGDGAEVQPLPQDTGDDHDASQGDPGGSGEVRDAVSDSGSSSPAGTPPADEN WLVALAQAAEQARGSGDLPGGLERLVRTVLAPSLDWRMLLDRFLQHRARNDYTWFPPSRRHVHMGMYLPSLAQVSLAEVI LAIDTSGSIAPRELDLFAAELSSLLEQYETTVRVIFCDTQITGEQVCGRQDLPLSLAPEGGGGTDYRPVFRHVDTMGYLP SCLVYLTDLECMHFPEDEPPYPVLWVQTGGQERSVPFGDIIHMH >Mature_443_residues SYSAAVAECRARMVKARIRLVMAHPFFGTLCLRMNPEPDIRCRTAWTDGTRLAFNPYYVRGLSDAALQGLLAHTVMHPAC QHHMRRGRRDADLWNRACDYAINWVLTDAGITLPPGYLDDSRYRGLSAEAIYAELSAGMGGDGMRGDNNTADGPEKEETQ ADEGAAAQAQTGDGEESSGSDEGAGAEQGDGAEVQPLPQDTGDDHDASQGDPGGSGEVRDAVSDSGSSSPAGTPPADENW LVALAQAAEQARGSGDLPGGLERLVRTVLAPSLDWRMLLDRFLQHRARNDYTWFPPSRRHVHMGMYLPSLAQVSLAEVIL AIDTSGSIAPRELDLFAAELSSLLEQYETTVRVIFCDTQITGEQVCGRQDLPLSLAPEGGGGTDYRPVFRHVDTMGYLPS CLVYLTDLECMHFPEDEPPYPVLWVQTGGQERSVPFGDIIHMH
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48235; Mature: 48104
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSAAVAECRARMVKARIRLVMAHPFFGTLCLRMNPEPDIRCRTAWTDGTRLAFNPYYV CCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEEEECCCCEEEECCCEE RGLSDAALQGLLAHTVMHPACQHHMRRGRRDADLWNRACDYAINWVLTDAGITLPPGYLD ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCC DSRYRGLSAEAIYAELSAGMGGDGMRGDNNTADGPEKEETQADEGAAAQAQTGDGEESSG CHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC SDEGAGAEQGDGAEVQPLPQDTGDDHDASQGDPGGSGEVRDAVSDSGSSSPAGTPPADEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCH WLVALAQAAEQARGSGDLPGGLERLVRTVLAPSLDWRMLLDRFLQHRARNDYTWFPPSRR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC HVHMGMYLPSLAQVSLAEVILAIDTSGSIAPRELDLFAAELSSLLEQYETTVRVIFCDTQ EEEECCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC ITGEQVCGRQDLPLSLAPEGGGGTDYRPVFRHVDTMGYLPSCLVYLTDLECMHFPEDEPP CCHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC YPVLWVQTGGQERSVPFGDIIHMH CCEEEEECCCCCCCCCHHCEEECC >Mature Secondary Structure SYSAAVAECRARMVKARIRLVMAHPFFGTLCLRMNPEPDIRCRTAWTDGTRLAFNPYYV CCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEEEECCCCEEEECCCEE RGLSDAALQGLLAHTVMHPACQHHMRRGRRDADLWNRACDYAINWVLTDAGITLPPGYLD ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCC DSRYRGLSAEAIYAELSAGMGGDGMRGDNNTADGPEKEETQADEGAAAQAQTGDGEESSG CHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC SDEGAGAEQGDGAEVQPLPQDTGDDHDASQGDPGGSGEVRDAVSDSGSSSPAGTPPADEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCH WLVALAQAAEQARGSGDLPGGLERLVRTVLAPSLDWRMLLDRFLQHRARNDYTWFPPSRR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC HVHMGMYLPSLAQVSLAEVILAIDTSGSIAPRELDLFAAELSSLLEQYETTVRVIFCDTQ EEEECCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC ITGEQVCGRQDLPLSLAPEGGGGTDYRPVFRHVDTMGYLPSCLVYLTDLECMHFPEDEPP CCHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC YPVLWVQTGGQERSVPFGDIIHMH CCEEEEECCCCCCCCCHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA