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The map label for this gene is 78355503

Identifier: 78355503

GI number: 78355503

Start: 465122

End: 465793

Strand: Direct

Name: 78355503

Synonym: Dde_0456

Alternate gene names: NA

Gene position: 465122-465793 (Clockwise)

Preceding gene: 78355502

Following gene: 78355504

Centisome position: 12.47

GC content: 61.9

Gene sequence:

>672_bases
ATGACGGATTGGTGCGTGCGGATGGCGGCCGTGGGCGGCGGAGTGGGGGTCACGCTGTTGCTGCTGCTTTTCCTGCTGGC
AGGAACTGCTCCCCGCGTGGTGACAGATGAGCCTGTGGTGCATGGCGCGGTCAGGCTGTCTTCGTTTACCGAAGCTCCGG
TACGCGAGACCGAGACCTATGCCACCCGCGATGTGCAGCAGGTGCAGCCCCTTGAAAAGATGTCAGAAATGGATGTGTCT
CTTGATTCGCCGCAGTTGGAAATGGACATGCCCTCCATGGAAATGGATTTCGCGCCCGAACTGGCAGGCACCGTGCCGCT
GAGCGGAGTCCCTTCCGTGGCTTCGGCCGGCGGGTTGTCGGCGCCGTCGGGCGGTGCCTTTACGCTGGGCGAGGTTGATG
AACAGCCGCGCCCGCTTTATGCGCCGGCCCCGCTGTATCCGATGCAGGAAAAACGTCTGGGGCGTGAATGCACCGTGGTG
GTGCGCATTCTGCTGGCTGAGGACGGAACGGTGAAACAGGCGACTCCCGTGTATGCGGAAGACGATACCCGGACGTTTCA
TGAGGCCGCCGTGGAAACGGTGCTGCGGTGGCGTTTTGTACCCTGCCGCAAAGACGGCAGGGCCGTGCAGTGCATTGCCG
AGCAGCCTTTTACCTTTTCACTGCATCAGTAA

Upstream 100 bases:

>100_bases
CTGCCGATGTGCAGTCCAGTTCCGGTGTGCTGGTGCGCGCCATCGACCTGTGCCGTCAGGCCGGAGTGCGCGATGTGAGC
GTGGCCACCAAGGATGCGCC

Downstream 100 bases:

>100_bases
AGGGCATGGAGGTGGTTATGACCGGATATGCCATGCTTGAACGATTGTGGCACACCCCGGCGCGGCAGATGCGGCTGGCG
GTGCTGTGCGTGGCTGTATG

Product: TonB-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTDWCVRMAAVGGGVGVTLLLLLFLLAGTAPRVVTDEPVVHGAVRLSSFTEAPVRETETYATRDVQQVQPLEKMSEMDVS
LDSPQLEMDMPSMEMDFAPELAGTVPLSGVPSVASAGGLSAPSGGAFTLGEVDEQPRPLYAPAPLYPMQEKRLGRECTVV
VRILLAEDGTVKQATPVYAEDDTRTFHEAAVETVLRWRFVPCRKDGRAVQCIAEQPFTFSLHQ

Sequences:

>Translated_223_residues
MTDWCVRMAAVGGGVGVTLLLLLFLLAGTAPRVVTDEPVVHGAVRLSSFTEAPVRETETYATRDVQQVQPLEKMSEMDVS
LDSPQLEMDMPSMEMDFAPELAGTVPLSGVPSVASAGGLSAPSGGAFTLGEVDEQPRPLYAPAPLYPMQEKRLGRECTVV
VRILLAEDGTVKQATPVYAEDDTRTFHEAAVETVLRWRFVPCRKDGRAVQCIAEQPFTFSLHQ
>Mature_222_residues
TDWCVRMAAVGGGVGVTLLLLLFLLAGTAPRVVTDEPVVHGAVRLSSFTEAPVRETETYATRDVQQVQPLEKMSEMDVSL
DSPQLEMDMPSMEMDFAPELAGTVPLSGVPSVASAGGLSAPSGGAFTLGEVDEQPRPLYAPAPLYPMQEKRLGRECTVVV
RILLAEDGTVKQATPVYAEDDTRTFHEAAVETVLRWRFVPCRKDGRAVQCIAEQPFTFSLHQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24193; Mature: 24062

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDWCVRMAAVGGGVGVTLLLLLFLLAGTAPRVVTDEPVVHGAVRLSSFTEAPVRETETY
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHH
ATRDVQQVQPLEKMSEMDVSLDSPQLEMDMPSMEMDFAPELAGTVPLSGVPSVASAGGLS
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCC
APSGGAFTLGEVDEQPRPLYAPAPLYPMQEKRLGRECTVVVRILLAEDGTVKQATPVYAE
CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEC
DDTRTFHEAAVETVLRWRFVPCRKDGRAVQCIAEQPFTFSLHQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCC
>Mature Secondary Structure 
TDWCVRMAAVGGGVGVTLLLLLFLLAGTAPRVVTDEPVVHGAVRLSSFTEAPVRETETY
CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHH
ATRDVQQVQPLEKMSEMDVSLDSPQLEMDMPSMEMDFAPELAGTVPLSGVPSVASAGGLS
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCC
APSGGAFTLGEVDEQPRPLYAPAPLYPMQEKRLGRECTVVVRILLAEDGTVKQATPVYAE
CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEC
DDTRTFHEAAVETVLRWRFVPCRKDGRAVQCIAEQPFTFSLHQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA