Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is exbB [C]

Identifier: 78355501

GI number: 78355501

Start: 464059

End: 464724

Strand: Direct

Name: exbB [C]

Synonym: Dde_0454

Alternate gene names: 78355501

Gene position: 464059-464724 (Clockwise)

Preceding gene: 78355500

Following gene: 78355502

Centisome position: 12.44

GC content: 65.17

Gene sequence:

>666_bases
ATGATGCCGGGTATCTTTTCCGAAGGCTTCATGAGCGGTCTTGCTTCGCTTTCTTCCGGCGCCGGTATTCTGGCGTTGCT
GGGGGTGCTGTGCGTCTGGGTGTGGACGCTGATCATTCTGACGGCGGTGGCCCTGCGCGATGCCGCGCGCGGCACTGCAT
GCACCGGCGCTGCCGCCGGGCAGCAGGATGACGGATGCCCCGCTCCGACGGCGGCAGGTGCGGCGGGGCTTGTCGCCGCA
CATGCCGTTTTTTGCCGCGGGCTGCGTCATGGCGGGCTCAGCCTGCGGTTGCGGCGGCGTATTGTGCGGGCCCGTATGGA
TATGGTGCTGCGGCAGGTGACAAAAAATGTGGGCACCATTCTGCTGCTTTCGTCGCTGGCGCCTTTGCTGGGGCTGCTGG
GCACGGTGGAAGGTATGGTGGGCACATTCCGTGCGCTGGCAGAGGCGGGCAGCGCAGACAACGCCGCACTGACCGGCGGT
ATTTCAAAAGCGCTGGTGACCACGCAGGGCGGCCTGCTGGTAGCCATTCCCAGCCTGCTTGCGGGCGGTATTCTGTACCG
TAAAAGCCGCAAGCTGCGTAATGCGCTGCGTTCCGTTTCGCTGCGGGCCGCAGAAGCATCGGGCCGGACGGCGCCCGCCT
GTTCCGGGCAAGGAGATATACAATGA

Upstream 100 bases:

>100_bases
TCTGCCACCATTTTCTGACCCGCAGAGTCAATACGGTGATGCTGGACATGGAAGCCGCCGGAACATCGCTCATCGCGGCG
GGGAGCAGCGGGAGGCAGCA

Downstream 100 bases:

>100_bases
GATGGCGCGGTACGACACAGGATGAAGTGGTAAACGATATCGATCTGACACCCATGATCGACATGGTTTTCATTTTGCTG
ATCTTTTTTATTGTATCCAC

Product: biopolymer transport proteins-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MMPGIFSEGFMSGLASLSSGAGILALLGVLCVWVWTLIILTAVALRDAARGTACTGAAAGQQDDGCPAPTAAGAAGLVAA
HAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTILLLSSLAPLLGLLGTVEGMVGTFRALAEAGSADNAALTGG
ISKALVTTQGGLLVAIPSLLAGGILYRKSRKLRNALRSVSLRAAEASGRTAPACSGQGDIQ

Sequences:

>Translated_221_residues
MMPGIFSEGFMSGLASLSSGAGILALLGVLCVWVWTLIILTAVALRDAARGTACTGAAAGQQDDGCPAPTAAGAAGLVAA
HAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTILLLSSLAPLLGLLGTVEGMVGTFRALAEAGSADNAALTGG
ISKALVTTQGGLLVAIPSLLAGGILYRKSRKLRNALRSVSLRAAEASGRTAPACSGQGDIQ
>Mature_221_residues
MMPGIFSEGFMSGLASLSSGAGILALLGVLCVWVWTLIILTAVALRDAARGTACTGAAAGQQDDGCPAPTAAGAAGLVAA
HAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTILLLSSLAPLLGLLGTVEGMVGTFRALAEAGSADNAALTGG
ISKALVTTQGGLLVAIPSLLAGGILYRKSRKLRNALRSVSLRAAEASGRTAPACSGQGDIQ

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22389; Mature: 22389

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPGIFSEGFMSGLASLSSGAGILALLGVLCVWVWTLIILTAVALRDAARGTACTGAAAG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQDDGCPAPTAAGAAGLVAAHAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSSLAPLLGLLGTVEGMVGTFRALAEAGSADNAALTGGISKALVTTQGGLLVAIPSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCHHHHHHHHH
AGGILYRKSRKLRNALRSVSLRAAEASGRTAPACSGQGDIQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMPGIFSEGFMSGLASLSSGAGILALLGVLCVWVWTLIILTAVALRDAARGTACTGAAAG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQDDGCPAPTAAGAAGLVAAHAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSSLAPLLGLLGTVEGMVGTFRALAEAGSADNAALTGGISKALVTTQGGLLVAIPSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCHHHHHHHHH
AGGILYRKSRKLRNALRSVSLRAAEASGRTAPACSGQGDIQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA