Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is ubiE [C]

Identifier: 78355476

GI number: 78355476

Start: 428591

End: 430885

Strand: Direct

Name: ubiE [C]

Synonym: Dde_0429

Alternate gene names: 78355476

Gene position: 428591-430885 (Clockwise)

Preceding gene: 78355475

Following gene: 78355477

Centisome position: 11.49

GC content: 56.99

Gene sequence:

>2295_bases
ATGAACATTCTGCAGCAGACTGCACCAGATGCGTCGCCTGTGATTTCTTTGCTTTTGCCGACAAAGGACCGGCATGAAAT
GCTGGTGCGCATGCTTGCCTCCATGGAAAAGGCCGCAGGCCGTATTCCATGGGAGGCAAGAGTATTGTACGCGGGTGAAG
ACGTGGCGCAGAAAGCGGCGGCATTGCGGCAGCGGTTTCCACAGGTGCAAGTGTATGATCAGGAAGAACATTTTTCGCCG
GGCAGACCGTCATGGCCGTCCATGATGCAGTTTTTGCTCCGGCAGACGGATGCCCCGTGGTTTATGTATGCCTCTGACGA
TATTGTTTTTGCACCTGATGCTGTACTGCTGGCCCTGAAGGCTCTGCAGGACAGGCAGGGACTGGCTGCGGGGGTGGCCA
TGGGATATCGCAATGTGCACGCTGCTCAGCCAGAGTGGGAACAATATGGTGTCGATCTGACTCTTGGCGATCAGGTACTG
GTCAATTACGGATTGCTTAGCACTCCTCTGGTGAAATCACTGGGGGGCTTTTCAGACGCGTACCGGTTTTACTGCGCAGA
TGGCGACATTTGCCTGCGTATCTTGCAGGCCGGATACGAAATAGTTGCATGTCCGGAAGCACACGTTCTGCATGATAATG
TTCTGGATGTGTCAAAACAAAATAATAATAATCTGGCAGAACAGGATATTGCTGCATACCGTGCTGCCTGGACAGGCAGT
TACTATGACGTGCAGCGTGTCAAACGGCTGTTTGCTGCCGATGCAGATTCCGAACCTTTGATGCCCCGGGGGCGTGCGCT
TGCGCCGGAGCAGCAGACGGACGGCTCTTTGCTGATACCCGCAGAAAGCGACGCACTGTGGGCACTGCATCAGGCAGGTC
TGTACAGGGCGGGTACTCCGCTCAGGCTGCATCTCGGATGCGGCGAGACGCATCTTGAGGGGTATGTGAATATAGATTAC
CCGCAGGACAGGCATGCCGTGATGCGGACAAAGGCCGACATCTGCGCGGAGATAAAGCAGCTGCGTTTTCCCGACAACAG
TGTGGATGAAATCAGGCTGCATCATGTGTTCGAGCACTTTAACCGTGTGGAGGCGCTGGGACTTCTGGTGCGCTGGCACC
GGTGGCTGCGTACGGGCGGAGTGCTGCACATCGAAACGCCTGACCTTGAAGGAAGCGCCCGCACGGTGCTGTCGGACGTG
CCCCTGAAGGAAAAAACCGCCGCGGTGCGGCATCTGGCGGGCGATCAGACAGAGACATGGGCGTATCATATCGATCACTG
GTTTCCTCAGCGGTTTCAGACCACGCTCAGTCATCTGGGGTATGGTGAACTGCGTATAACAGCAGATCGGTGGAAGAAGC
CTCCGTACCTTGCCAATGTTACCGCCGTGGCTGTCAAACAGGCTGATATACCGCTGGAAAAACTGCTGCAGGCTGCTGAT
GAACTGCTGTGGCTGAGTACCGTGGCTCCGGCGGAAATTCCCACCTATGAGGTGTGGAAAAAACAGCTGCGCGAATTTAT
GGCCTACCGCCCTGTGCACCCTGCTGCCGGGCAGCCTGCACAGCAGCAGACTGCCGGTACTGTGCTGCCGCCGCTTTGCG
CCGCCCCGCTGAAGGACATTCATGATTTCAATCAGCGCGGGCGCGACCGCTGGATGGCGGCAAAGGCGGCCGCGGTACCG
GACGGCGCCCGCGTGCTGGACGTGGGTGCGGGAACGTGTCCGTACCGTCCGCTTTTTTCACACTGCCGCTATGTGGCTCA
TGATTTCAAAGAGTATCAGGGCGAAAAGCTGGGTGGCGGCACGGACTACGGCGATATTGATCTGGTGGGCGACATTACCG
CCATACCGGCTCCCGATGCGTCGTTTGACGTGGTGCTGTGCACGGAGGTTCTGGAGCATGTTCCTGATCCGGCAGCAGCC
CTGCGCGAGATGGTCCGGCTGCTGCGTCCGGGCGGCAGGCTGCTGCTTACGGCCCCTCTCGGGTCGGGGCTGCATCAGGA
GCCGTTCCACTATTATGGCGGATTCACTAGGCATTTTTATGAAAAATTTTTGCCGCCTCTGGGCATCAGGATAACGGAGC
TGCGGCCCAACGGCGGTTTTTTCCGTCATCTTGCGCAGGAATGCGCCAGAGTATCGTGGCTGCTGGATAAAAAACCGGAA
TTTGCCGACGGGCGGGCAGAAGAACTGCGTGCGTTTTTCGGCGAAATGCTGCCCCGTTATCTTGCAGGGATGGATGACAG
ATACATGCTGGAAGATTTCACTGTGGGATATTTTGTGGAAGGAGTGAAAGCGTGA

Upstream 100 bases:

>100_bases
AAATGAGCGGCTTCACCTTTTCCGAAGTGGGATACGGTGTGGGCTTTGCAGTGCGCATGCGCTAGCGCCGTGCGGAACGT
TATAACCTTCCGAGGAATAT

Downstream 100 bases:

>100_bases
GGACGCAGGCCGTCGTATTCAGCAAGGACAGGGCGCTGCAGTTGCGCGCCACCCTCGAATCGCTGCTGCTGCGGTGCACT
GATGCCGCGGAGGAACTGCG

Product: ubiquinone/menaquinone biosynthesis methylase-like protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; TPR Repeat-Containing Methylase UbiE

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MNILQQTAPDASPVISLLLPTKDRHEMLVRMLASMEKAAGRIPWEARVLYAGEDVAQKAAALRQRFPQVQVYDQEEHFSP
GRPSWPSMMQFLLRQTDAPWFMYASDDIVFAPDAVLLALKALQDRQGLAAGVAMGYRNVHAAQPEWEQYGVDLTLGDQVL
VNYGLLSTPLVKSLGGFSDAYRFYCADGDICLRILQAGYEIVACPEAHVLHDNVLDVSKQNNNNLAEQDIAAYRAAWTGS
YYDVQRVKRLFAADADSEPLMPRGRALAPEQQTDGSLLIPAESDALWALHQAGLYRAGTPLRLHLGCGETHLEGYVNIDY
PQDRHAVMRTKADICAEIKQLRFPDNSVDEIRLHHVFEHFNRVEALGLLVRWHRWLRTGGVLHIETPDLEGSARTVLSDV
PLKEKTAAVRHLAGDQTETWAYHIDHWFPQRFQTTLSHLGYGELRITADRWKKPPYLANVTAVAVKQADIPLEKLLQAAD
ELLWLSTVAPAEIPTYEVWKKQLREFMAYRPVHPAAGQPAQQQTAGTVLPPLCAAPLKDIHDFNQRGRDRWMAAKAAAVP
DGARVLDVGAGTCPYRPLFSHCRYVAHDFKEYQGEKLGGGTDYGDIDLVGDITAIPAPDASFDVVLCTEVLEHVPDPAAA
LREMVRLLRPGGRLLLTAPLGSGLHQEPFHYYGGFTRHFYEKFLPPLGIRITELRPNGGFFRHLAQECARVSWLLDKKPE
FADGRAEELRAFFGEMLPRYLAGMDDRYMLEDFTVGYFVEGVKA

Sequences:

>Translated_764_residues
MNILQQTAPDASPVISLLLPTKDRHEMLVRMLASMEKAAGRIPWEARVLYAGEDVAQKAAALRQRFPQVQVYDQEEHFSP
GRPSWPSMMQFLLRQTDAPWFMYASDDIVFAPDAVLLALKALQDRQGLAAGVAMGYRNVHAAQPEWEQYGVDLTLGDQVL
VNYGLLSTPLVKSLGGFSDAYRFYCADGDICLRILQAGYEIVACPEAHVLHDNVLDVSKQNNNNLAEQDIAAYRAAWTGS
YYDVQRVKRLFAADADSEPLMPRGRALAPEQQTDGSLLIPAESDALWALHQAGLYRAGTPLRLHLGCGETHLEGYVNIDY
PQDRHAVMRTKADICAEIKQLRFPDNSVDEIRLHHVFEHFNRVEALGLLVRWHRWLRTGGVLHIETPDLEGSARTVLSDV
PLKEKTAAVRHLAGDQTETWAYHIDHWFPQRFQTTLSHLGYGELRITADRWKKPPYLANVTAVAVKQADIPLEKLLQAAD
ELLWLSTVAPAEIPTYEVWKKQLREFMAYRPVHPAAGQPAQQQTAGTVLPPLCAAPLKDIHDFNQRGRDRWMAAKAAAVP
DGARVLDVGAGTCPYRPLFSHCRYVAHDFKEYQGEKLGGGTDYGDIDLVGDITAIPAPDASFDVVLCTEVLEHVPDPAAA
LREMVRLLRPGGRLLLTAPLGSGLHQEPFHYYGGFTRHFYEKFLPPLGIRITELRPNGGFFRHLAQECARVSWLLDKKPE
FADGRAEELRAFFGEMLPRYLAGMDDRYMLEDFTVGYFVEGVKA
>Mature_764_residues
MNILQQTAPDASPVISLLLPTKDRHEMLVRMLASMEKAAGRIPWEARVLYAGEDVAQKAAALRQRFPQVQVYDQEEHFSP
GRPSWPSMMQFLLRQTDAPWFMYASDDIVFAPDAVLLALKALQDRQGLAAGVAMGYRNVHAAQPEWEQYGVDLTLGDQVL
VNYGLLSTPLVKSLGGFSDAYRFYCADGDICLRILQAGYEIVACPEAHVLHDNVLDVSKQNNNNLAEQDIAAYRAAWTGS
YYDVQRVKRLFAADADSEPLMPRGRALAPEQQTDGSLLIPAESDALWALHQAGLYRAGTPLRLHLGCGETHLEGYVNIDY
PQDRHAVMRTKADICAEIKQLRFPDNSVDEIRLHHVFEHFNRVEALGLLVRWHRWLRTGGVLHIETPDLEGSARTVLSDV
PLKEKTAAVRHLAGDQTETWAYHIDHWFPQRFQTTLSHLGYGELRITADRWKKPPYLANVTAVAVKQADIPLEKLLQAAD
ELLWLSTVAPAEIPTYEVWKKQLREFMAYRPVHPAAGQPAQQQTAGTVLPPLCAAPLKDIHDFNQRGRDRWMAAKAAAVP
DGARVLDVGAGTCPYRPLFSHCRYVAHDFKEYQGEKLGGGTDYGDIDLVGDITAIPAPDASFDVVLCTEVLEHVPDPAAA
LREMVRLLRPGGRLLLTAPLGSGLHQEPFHYYGGFTRHFYEKFLPPLGIRITELRPNGGFFRHLAQECARVSWLLDKKPE
FADGRAEELRAFFGEMLPRYLAGMDDRYMLEDFTVGYFVEGVKA

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: COG4627

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 85645; Mature: 85645

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILQQTAPDASPVISLLLPTKDRHEMLVRMLASMEKAAGRIPWEARVLYAGEDVAQKAA
CCCHHHCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
ALRQRFPQVQVYDQEEHFSPGRPSWPSMMQFLLRQTDAPWFMYASDDIVFAPDAVLLALK
HHHHHCCCEEEECCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHH
ALQDRQGLAAGVAMGYRNVHAAQPEWEQYGVDLTLGDQVLVNYGLLSTPLVKSLGGFSDA
HHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCEEECCHHHHHCCCHHHHHHHHHCCCCCC
YRFYCADGDICLRILQAGYEIVACPEAHVLHDNVLDVSKQNNNNLAEQDIAAYRAAWTGS
CEEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCC
YYDVQRVKRLFAADADSEPLMPRGRALAPEQQTDGSLLIPAESDALWALHQAGLYRAGTP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEECCCC
LRLHLGCGETHLEGYVNIDYPQDRHAVMRTKADICAEIKQLRFPDNSVDEIRLHHVFEHF
EEEEECCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NRVEALGLLVRWHRWLRTGGVLHIETPDLEGSARTVLSDVPLKEKTAAVRHLAGDQTETW
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCE
AYHIDHWFPQRFQTTLSHLGYGELRITADRWKKPPYLANVTAVAVKQADIPLEKLLQAAD
EEEHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCEECHHEEEEECCCCCHHHHHHHHH
ELLWLSTVAPAEIPTYEVWKKQLREFMAYRPVHPAAGQPAQQQTAGTVLPPLCAAPLKDI
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
HDFNQRGRDRWMAAKAAAVPDGARVLDVGAGTCPYRPLFSHCRYVAHDFKEYQGEKLGGG
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TDYGDIDLVGDITAIPAPDASFDVVLCTEVLEHVPDPAAALREMVRLLRPGGRLLLTAPL
CCCCCEEEEECEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC
GSGLHQEPFHYYGGFTRHFYEKFLPPLGIRITELRPNGGFFRHLAQECARVSWLLDKKPE
CCCCCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
FADGRAEELRAFFGEMLPRYLAGMDDRYMLEDFTVGYFVEGVKA
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHCCCC
>Mature Secondary Structure
MNILQQTAPDASPVISLLLPTKDRHEMLVRMLASMEKAAGRIPWEARVLYAGEDVAQKAA
CCCHHHCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
ALRQRFPQVQVYDQEEHFSPGRPSWPSMMQFLLRQTDAPWFMYASDDIVFAPDAVLLALK
HHHHHCCCEEEECCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHH
ALQDRQGLAAGVAMGYRNVHAAQPEWEQYGVDLTLGDQVLVNYGLLSTPLVKSLGGFSDA
HHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCEEECCHHHHHCCCHHHHHHHHHCCCCCC
YRFYCADGDICLRILQAGYEIVACPEAHVLHDNVLDVSKQNNNNLAEQDIAAYRAAWTGS
CEEEECCHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCC
YYDVQRVKRLFAADADSEPLMPRGRALAPEQQTDGSLLIPAESDALWALHQAGLYRAGTP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEECCCC
LRLHLGCGETHLEGYVNIDYPQDRHAVMRTKADICAEIKQLRFPDNSVDEIRLHHVFEHF
EEEEECCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NRVEALGLLVRWHRWLRTGGVLHIETPDLEGSARTVLSDVPLKEKTAAVRHLAGDQTETW
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCE
AYHIDHWFPQRFQTTLSHLGYGELRITADRWKKPPYLANVTAVAVKQADIPLEKLLQAAD
EEEHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCEECHHEEEEECCCCCHHHHHHHHH
ELLWLSTVAPAEIPTYEVWKKQLREFMAYRPVHPAAGQPAQQQTAGTVLPPLCAAPLKDI
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
HDFNQRGRDRWMAAKAAAVPDGARVLDVGAGTCPYRPLFSHCRYVAHDFKEYQGEKLGGG
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TDYGDIDLVGDITAIPAPDASFDVVLCTEVLEHVPDPAAALREMVRLLRPGGRLLLTAPL
CCCCCEEEEECEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC
GSGLHQEPFHYYGGFTRHFYEKFLPPLGIRITELRPNGGFFRHLAQECARVSWLLDKKPE
CCCCCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
FADGRAEELRAFFGEMLPRYLAGMDDRYMLEDFTVGYFVEGVKA
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA