Click here to switch to the map view.

The map label for this gene is fadL [C]

Identifier: 78355386

GI number: 78355386

Start: 328534

End: 329763

Strand: Direct

Name: fadL [C]

Synonym: Dde_0339

Alternate gene names: 78355386

Gene position: 328534-329763 (Clockwise)

Preceding gene: 78355384

Following gene: 78355393

Centisome position: 8.81

GC content: 56.42

Gene sequence:

>1230_bases
GTGCGACGGTTCTTCATAGTCTGTTGTCTCGCTCTTTCGGGCATGTTTCTCAGCCTTCCGCACACGGCCCGGGCCGCAGG
ATTTGCCATGTACGAATTCAGCGCCCGCGGCAATGCTCTGGGCGGCGCCATGGTTGCGCGCAAGGCCAGTCCTTCTTCCA
TTGCGTTCAACCCTGCGCTGATTACGCAGCTTAAGGGTACTCAGATGGCTGCGGGCATGACGCTGGTAGACCCCAGCGCC
ACTGTGGAAGTGAAAGGGCAGGAAACTGTCTCCGCCAAAAAGAATTACTGGGCCATTCCTCATGCCTACGCCACGCGGCA
GGTCAACGATGCGCTGTACTACGGTGTCGGCGTGTTTTCCCGTTTCGGTCTGGGTAATGAATATTCCAAAGACTGGTTCG
GTAAAGACCAGCTGTATTATGTGGGCATACAGTCCCTGTCGGTGAACCCCGTCATGGGGCTTAAACTTACCGACAAGCTT
TCGGTCGCCTTTGGCATTGAGGCCATGTGGTTTGACTATGAGCAGAAAAACATAGTGGAAGCCGGTGCCGGCGGCAGGCT
GGACGGCCGTGTGAACGGCGAAAGCATAGGCTACGGCATTAATCTGGGCATTCACTATCAGCCTGTGGAATGGCTTGCGC
TGGGCGCCAGCTGGCGTTCCGGCATCAAGCAGAACCTGAAGGGCACGGGCTATTTCAGCGGTTCCGGCCCCCTTTTCAGC
AACTGGGGCGATACCGATGCGCGCGGCAGCGTGAACCTGCCCGACATGCTTTTTCTGGGGGTATGTGTGATGCCCACCGA
CAGGCTGAGCATTGAAGCGGGTGCGGTACGTACCGGCTGGACAAGCTATGACAAGCTGGTCATCGATTATAACAACCCCA
GTGTGGCAACGACGGACAAAACCACCGAGTGGAAGGATGTCTGGCGGTTTAACGTGGGGGTTGAATATGCCCTTAACGAG
ATGCTGGACCTGCGTGCCGGCTATGTTTATGACAATTCGCCGCTCAACGAAAACTATCTTGATTTTCTGGTGCCTGCCAA
CGACAGGCATCTTTTCAGCGGCGGTGTGGGCATACATCAGGGGCCGTGGACGCTGGACCTCAGCTACACCTACCTGCTTA
TCAAGGAACGCACAGGCAGTGTGACCACCACAATGGGCGGTGAAAACAGAGTGCGCTTCAAAGACGGAGACGCTCACCTT
GTGGGCATGACGCTGGGATACCGCTTTTAG

Upstream 100 bases:

>100_bases
CTGAATACTGTAATGAAGCATACGCACTGATTCGAAGAACGGGGAACACGGACGGAGGTTGCGGCTACACAACGTTATTC
ATCATCAATCGAGGTTATCA

Downstream 100 bases:

>100_bases
ACGGCACCGGCTGCATACGGCTTCAAGCGTGCGGAACACATGTTCCGCACGCTTTTTTTACGTTGTTGCTCCGGCTGGCT
GTTGCCGTGTGCCGGTGCGC

Product: OMPP1/FadL/TodX family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRRFFIVCCLALSGMFLSLPHTARAAGFAMYEFSARGNALGGAMVARKASPSSIAFNPALITQLKGTQMAAGMTLVDPSA
TVEVKGQETVSAKKNYWAIPHAYATRQVNDALYYGVGVFSRFGLGNEYSKDWFGKDQLYYVGIQSLSVNPVMGLKLTDKL
SVAFGIEAMWFDYEQKNIVEAGAGGRLDGRVNGESIGYGINLGIHYQPVEWLALGASWRSGIKQNLKGTGYFSGSGPLFS
NWGDTDARGSVNLPDMLFLGVCVMPTDRLSIEAGAVRTGWTSYDKLVIDYNNPSVATTDKTTEWKDVWRFNVGVEYALNE
MLDLRAGYVYDNSPLNENYLDFLVPANDRHLFSGGVGIHQGPWTLDLSYTYLLIKERTGSVTTTMGGENRVRFKDGDAHL
VGMTLGYRF

Sequences:

>Translated_409_residues
MRRFFIVCCLALSGMFLSLPHTARAAGFAMYEFSARGNALGGAMVARKASPSSIAFNPALITQLKGTQMAAGMTLVDPSA
TVEVKGQETVSAKKNYWAIPHAYATRQVNDALYYGVGVFSRFGLGNEYSKDWFGKDQLYYVGIQSLSVNPVMGLKLTDKL
SVAFGIEAMWFDYEQKNIVEAGAGGRLDGRVNGESIGYGINLGIHYQPVEWLALGASWRSGIKQNLKGTGYFSGSGPLFS
NWGDTDARGSVNLPDMLFLGVCVMPTDRLSIEAGAVRTGWTSYDKLVIDYNNPSVATTDKTTEWKDVWRFNVGVEYALNE
MLDLRAGYVYDNSPLNENYLDFLVPANDRHLFSGGVGIHQGPWTLDLSYTYLLIKERTGSVTTTMGGENRVRFKDGDAHL
VGMTLGYRF
>Mature_409_residues
MRRFFIVCCLALSGMFLSLPHTARAAGFAMYEFSARGNALGGAMVARKASPSSIAFNPALITQLKGTQMAAGMTLVDPSA
TVEVKGQETVSAKKNYWAIPHAYATRQVNDALYYGVGVFSRFGLGNEYSKDWFGKDQLYYVGIQSLSVNPVMGLKLTDKL
SVAFGIEAMWFDYEQKNIVEAGAGGRLDGRVNGESIGYGINLGIHYQPVEWLALGASWRSGIKQNLKGTGYFSGSGPLFS
NWGDTDARGSVNLPDMLFLGVCVMPTDRLSIEAGAVRTGWTSYDKLVIDYNNPSVATTDKTTEWKDVWRFNVGVEYALNE
MLDLRAGYVYDNSPLNENYLDFLVPANDRHLFSGGVGIHQGPWTLDLSYTYLLIKERTGSVTTTMGGENRVRFKDGDAHL
VGMTLGYRF

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

Organism=Escherichia coli, GI145693163, Length=402, Percent_Identity=22.636815920398, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR001702
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 44939; Mature: 44939

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFFIVCCLALSGMFLSLPHTARAAGFAMYEFSARGNALGGAMVARKASPSSIAFNPAL
CCCEEEEHHHHHCCCEEECCCCHHHCCEEEEEECCCCCCCCCCEEEECCCCCCEEECHHH
ITQLKGTQMAAGMTLVDPSATVEVKGQETVSAKKNYWAIPHAYATRQVNDALYYGVGVFS
EEEECCCEEECCEEEECCCCEEEECCCCCCCCCCCEEECCCHHHHHHHCCCEEEHHHHHH
RFGLGNEYSKDWFGKDQLYYVGIQSLSVNPVMGLKLTDKLSVAFGIEAMWFDYEQKNIVE
HCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCEEEEECEEEEEEECCCCCEEE
AGAGGRLDGRVNGESIGYGINLGIHYQPVEWLALGASWRSGIKQNLKGTGYFSGSGPLFS
CCCCCCCCCEECCCEEEEEEEEEEEECCHHEEEECCHHHHHHHHCCCCCEEECCCCCCCC
NWGDTDARGSVNLPDMLFLGVCVMPTDRLSIEAGAVRTGWTSYDKLVIDYNNPSVATTDK
CCCCCCCCCCCCCCHHHHHCEEECCCCCEEEECCCEECCCCCCCEEEEECCCCCEEECCC
TTEWKDVWRFNVGVEYALNEMLDLRAGYVYDNSPLNENYLDFLVPANDRHLFSGGVGIHQ
CCCCHHEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCCC
GPWTLDLSYTYLLIKERTGSVTTTMGGENRVRFKDGDAHLVGMTLGYRF
CCEEEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEEECCCC
>Mature Secondary Structure
MRRFFIVCCLALSGMFLSLPHTARAAGFAMYEFSARGNALGGAMVARKASPSSIAFNPAL
CCCEEEEHHHHHCCCEEECCCCHHHCCEEEEEECCCCCCCCCCEEEECCCCCCEEECHHH
ITQLKGTQMAAGMTLVDPSATVEVKGQETVSAKKNYWAIPHAYATRQVNDALYYGVGVFS
EEEECCCEEECCEEEECCCCEEEECCCCCCCCCCCEEECCCHHHHHHHCCCEEEHHHHHH
RFGLGNEYSKDWFGKDQLYYVGIQSLSVNPVMGLKLTDKLSVAFGIEAMWFDYEQKNIVE
HCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCEEEEECEEEEEEECCCCCEEE
AGAGGRLDGRVNGESIGYGINLGIHYQPVEWLALGASWRSGIKQNLKGTGYFSGSGPLFS
CCCCCCCCCEECCCEEEEEEEEEEEECCHHEEEECCHHHHHHHHCCCCCEEECCCCCCCC
NWGDTDARGSVNLPDMLFLGVCVMPTDRLSIEAGAVRTGWTSYDKLVIDYNNPSVATTDK
CCCCCCCCCCCCCCHHHHHCEEECCCCCEEEECCCEECCCCCCCEEEEECCCCCEEECCC
TTEWKDVWRFNVGVEYALNEMLDLRAGYVYDNSPLNENYLDFLVPANDRHLFSGGVGIHQ
CCCCHHEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCCC
GPWTLDLSYTYLLIKERTGSVTTTMGGENRVRFKDGDAHLVGMTLGYRF
CCEEEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]