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The map label for this gene is torC [H]

Identifier: 78355346

GI number: 78355346

Start: 289421

End: 289987

Strand: Direct

Name: torC [H]

Synonym: Dde_0299

Alternate gene names: 78355346

Gene position: 289421-289987 (Clockwise)

Preceding gene: 78355345

Following gene: 78355347

Centisome position: 7.76

GC content: 55.56

Gene sequence:

>567_bases
ATGCGGAGGTTTCTGAAACCGCTATTTCTGGTTTCGCTGGGCGTGCTGGTAGGATTTCCTGTTTTCAGCATGACCTACTA
TACCATGGTGCGCACATCGACGCCGGAATTCTGTGCATCATGCCACGAAATAGTACCGGCGTACCAGTCGTGGAAAACTT
CCACTCATGTGAACAATGCGCAGGGCGTAGTGGCGGACTGTATGGACTGTCACCTGCCTGCCCCTCATCAGACCGTCGAC
TTCTTTTTTTCCAAAACCTACCACGGCATCAAGGACGTTGTGGCACATGTGCTTCACGGTTCAGAAGCGTATGACCGCGA
AAAGAACCGTCAGGCCGCCTATGACAGTTTCACCAACGACCAGTGCCAGAAGTGCCATCGCAATATCCTGTACATGCCGC
ACAACCGCGGAGCCATGATGGCTCACCGCACAGTGCTGTACGACCGTTCGGGCCGTACACGCAAGTGTGTGGACTGCCAC
CGCGACCTTGTGCATGTGGACAGGCCTCAATACCGGTACAAGCAGTTTGCCGCCCCGTATCGGGCGTCGGGGCTGGCGGA
TATCTGA

Upstream 100 bases:

>100_bases
TTGTACAAAACAATAATTATGTGTTTGGATGGTGCGTAATCAGTGCAGGTGTTGAAGACGCCGTAACATCAGGCCACCAG
ATCGGGCAACGGGAGGCTGT

Downstream 100 bases:

>100_bases
CAACGGCCGCCGGTCCGGAAAAGGTGCGGTGCGGCGCGTTCCGTCGGGTGACGGTGCGTCCGGTGCCGTCGGGTGAATCA
ACGTGAAGGAGGCAAAGGAA

Product: trimethylamine N-oxide reductase, cytochrome c-type subunit

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRRFLKPLFLVSLGVLVGFPVFSMTYYTMVRTSTPEFCASCHEIVPAYQSWKTSTHVNNAQGVVADCMDCHLPAPHQTVD
FFFSKTYHGIKDVVAHVLHGSEAYDREKNRQAAYDSFTNDQCQKCHRNILYMPHNRGAMMAHRTVLYDRSGRTRKCVDCH
RDLVHVDRPQYRYKQFAAPYRASGLADI

Sequences:

>Translated_188_residues
MRRFLKPLFLVSLGVLVGFPVFSMTYYTMVRTSTPEFCASCHEIVPAYQSWKTSTHVNNAQGVVADCMDCHLPAPHQTVD
FFFSKTYHGIKDVVAHVLHGSEAYDREKNRQAAYDSFTNDQCQKCHRNILYMPHNRGAMMAHRTVLYDRSGRTRKCVDCH
RDLVHVDRPQYRYKQFAAPYRASGLADI
>Mature_188_residues
MRRFLKPLFLVSLGVLVGFPVFSMTYYTMVRTSTPEFCASCHEIVPAYQSWKTSTHVNNAQGVVADCMDCHLPAPHQTVD
FFFSKTYHGIKDVVAHVLHGSEAYDREKNRQAAYDSFTNDQCQKCHRNILYMPHNRGAMMAHRTVLYDRSGRTRKCVDCH
RDLVHVDRPQYRYKQFAAPYRASGLADI

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1787230, Length=167, Percent_Identity=30.5389221556886, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1788530, Length=172, Percent_Identity=30.8139534883721, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 21685; Mature: 21685

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLKPLFLVSLGVLVGFPVFSMTYYTMVRTSTPEFCASCHEIVPAYQSWKTSTHVNNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
QGVVADCMDCHLPAPHQTVDFFFSKTYHGIKDVVAHVLHGSEAYDREKNRQAAYDSFTND
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
QCQKCHRNILYMPHNRGAMMAHRTVLYDRSGRTRKCVDCHRDLVHVDRPQYRYKQFAAPY
HHHHHHHCCEECCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCH
RASGLADI
HCCCCCCC
>Mature Secondary Structure
MRRFLKPLFLVSLGVLVGFPVFSMTYYTMVRTSTPEFCASCHEIVPAYQSWKTSTHVNNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
QGVVADCMDCHLPAPHQTVDFFFSKTYHGIKDVVAHVLHGSEAYDREKNRQAAYDSFTND
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
QCQKCHRNILYMPHNRGAMMAHRTVLYDRSGRTRKCVDCHRDLVHVDRPQYRYKQFAAPY
HHHHHHHCCEECCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCH
RASGLADI
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]