Click here to switch to the map view.

The map label for this gene is ychJ [C]

Identifier: 78355252

GI number: 78355252

Start: 184909

End: 185397

Strand: Direct

Name: ychJ [C]

Synonym: Dde_0205

Alternate gene names: 78355252

Gene position: 184909-185397 (Clockwise)

Preceding gene: 78355251

Following gene: 78355253

Centisome position: 4.96

GC content: 61.15

Gene sequence:

>489_bases
ATGACACAATGCCATTGCGGCTCCGGCAGAACGTACGAAGAGTGCTGCGGGCCCCTTATTGCCGGAACCAGCCAGGCCGC
CACGGCCGAGGCCCTCATGCGTTCCCGTTTCAGCGCGCACTGTGTGGGTGCTTATGAATATCTTGAAGCCACAACGCACC
CTGATATCCGTGATGAAGCCTCGGCCGATGAAATCCGGCAGTGGTCGGAACATATGCGCTGGACAGCCCTTACCGTGCTG
CGTACCGAAAAAGGCGGCGAAGAGGACAACAGAGGCATTGTGGAGTTTCAGGCGGATTACACCATGCGCGGTGTGCCCCA
GACTCTGCGCGAGACGAGCAGCTTTGTGCGGGTGGACGGCCGCTGGCTGTATGAAGACGGTCATGTGCACAGCCAGACCG
TGCGCCGTGAAGAGCCCAAGGTGGGCCGCAACGAACCCTGCCCCTGCGGCAGCGGCAAAAAGTACAAGAAGTGCTGCGGC
CGCGCCTAG

Upstream 100 bases:

>100_bases
CTTGAAGGCCGCCTGACAGACAAACAGGAAATTTGCCATGCCCACGGCCACGAAGGCTGCCACGGGCATTAATATAACTT
GAAGAACAGGTAGACCGACT

Downstream 100 bases:

>100_bases
TCCGCAGCGGTTTCAGGCTGTTTTCACGCAGCATCGTCACCTATCCGGGCCGGAGCGCAATACGCTCCGGCCTTTTGCCT
TGTCCGGCAGGGGGTGTCCC

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTQCHCGSGRTYEECCGPLIAGTSQAATAEALMRSRFSAHCVGAYEYLEATTHPDIRDEASADEIRQWSEHMRWTALTVL
RTEKGGEEDNRGIVEFQADYTMRGVPQTLRETSSFVRVDGRWLYEDGHVHSQTVRREEPKVGRNEPCPCGSGKKYKKCCG
RA

Sequences:

>Translated_162_residues
MTQCHCGSGRTYEECCGPLIAGTSQAATAEALMRSRFSAHCVGAYEYLEATTHPDIRDEASADEIRQWSEHMRWTALTVL
RTEKGGEEDNRGIVEFQADYTMRGVPQTLRETSSFVRVDGRWLYEDGHVHSQTVRREEPKVGRNEPCPCGSGKKYKKCCG
RA
>Mature_161_residues
TQCHCGSGRTYEECCGPLIAGTSQAATAEALMRSRFSAHCVGAYEYLEATTHPDIRDEASADEIRQWSEHMRWTALTVLR
TEKGGEEDNRGIVEFQADYTMRGVPQTLRETSSFVRVDGRWLYEDGHVHSQTVRREEPKVGRNEPCPCGSGKKYKKCCGR
A

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=162, Percent_Identity=40.1234567901235, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18223; Mature: 18092

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQCHCGSGRTYEECCGPLIAGTSQAATAEALMRSRFSAHCVGAYEYLEATTHPDIRDEA
CCCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
SADEIRQWSEHMRWTALTVLRTEKGGEEDNRGIVEFQADYTMRGVPQTLRETSSFVRVDG
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHEEEECC
RWLYEDGHVHSQTVRREEPKVGRNEPCPCGSGKKYKKCCGRA
EEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
TQCHCGSGRTYEECCGPLIAGTSQAATAEALMRSRFSAHCVGAYEYLEATTHPDIRDEA
CCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
SADEIRQWSEHMRWTALTVLRTEKGGEEDNRGIVEFQADYTMRGVPQTLRETSSFVRVDG
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHEEEECC
RWLYEDGHVHSQTVRREEPKVGRNEPCPCGSGKKYKKCCGRA
EEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA