| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355198
Identifier: 78355198
GI number: 78355198
Start: 137965
End: 138687
Strand: Direct
Name: 78355198
Synonym: Dde_0151
Alternate gene names: NA
Gene position: 137965-138687 (Clockwise)
Preceding gene: 78355197
Following gene: 78355199
Centisome position: 3.7
GC content: 60.17
Gene sequence:
>723_bases ATGCAGCATCTGCTTACGTGGCATGGCCACGCCAATTTTCAGATTGCCACAGAGGGCGCCAACATTCTGATAGACCCTTT TTTCGAGGGTAATCCTTCCGCTGCCGCGGCGTGGCAGGGCATAGCAAAACCCGACCTTGTGCTGGTCACCCACGACCACG GCGACCATGTGGGCCAGACCGTGGAGATATGCCGTGAAACGGGCGCCATGATGGGTGCCATAGTGGGTACGGCTGAAAAG CTGGCCGCTGCGGGTGTGCCGCAGCAGCAGGTGCTTAACGGCATCGGGTTCAACATCGGCGGCACAGTGCTGCACAACGG TGTGGCCGTGACCATGACGCAGGCGTATCATTCTTCGGAATCCGGCGCGCCTGCGGGGTATATACTTACGCTGCCCGACG GCTTTACCATTTACCACGCCGGTGACACGGGTATTTTTGCCGGTATGGAACTGTGGGGGCGTCTGTATTCCATTGATGTG GCGCTGCTGCCCATCGGCGGGGTGTTCACCATGGATGCCAAGCAGGCCGCGCTGGCGTGCCGTCTGCTGCGTGCGCGTTC GGTGGTGCCCATGCACTGGGGCACGTTCCCCGTGCTGGAGGGCAATACGGCGCGTTTTAAAGAACAACTGATGAATTTTG CTCCGGACTGCCGCCTCTTCGACATGAAGCCCGGAGAAACCCTGACGCTGGAAACCGCGTCAGAAGGCTGTGCCTGCGAC TAG
Upstream 100 bases:
>100_bases TGGGCAGGATGCTTGATCATCTGGGCATCGAGCACGACCTGTGCCGCCGCTGGGGCGGTTTGCCGGCCTGACAACCAGAC AACGGGAAGGAGACGTTTTC
Downstream 100 bases:
>100_bases CAGGGTTCTCATGCGTGCGTCTGGCATCGTGCGCCAGAGAAACACATCGGCGGTAATAAGATGGATTGGGTAGTCTACCT GCTGGCCTGTGCCGACGGTA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MQHLLTWHGHANFQIATEGANILIDPFFEGNPSAAAAWQGIAKPDLVLVTHDHGDHVGQTVEICRETGAMMGAIVGTAEK LAAAGVPQQQVLNGIGFNIGGTVLHNGVAVTMTQAYHSSESGAPAGYILTLPDGFTIYHAGDTGIFAGMELWGRLYSIDV ALLPIGGVFTMDAKQAALACRLLRARSVVPMHWGTFPVLEGNTARFKEQLMNFAPDCRLFDMKPGETLTLETASEGCACD
Sequences:
>Translated_240_residues MQHLLTWHGHANFQIATEGANILIDPFFEGNPSAAAAWQGIAKPDLVLVTHDHGDHVGQTVEICRETGAMMGAIVGTAEK LAAAGVPQQQVLNGIGFNIGGTVLHNGVAVTMTQAYHSSESGAPAGYILTLPDGFTIYHAGDTGIFAGMELWGRLYSIDV ALLPIGGVFTMDAKQAALACRLLRARSVVPMHWGTFPVLEGNTARFKEQLMNFAPDCRLFDMKPGETLTLETASEGCACD >Mature_240_residues MQHLLTWHGHANFQIATEGANILIDPFFEGNPSAAAAWQGIAKPDLVLVTHDHGDHVGQTVEICRETGAMMGAIVGTAEK LAAAGVPQQQVLNGIGFNIGGTVLHNGVAVTMTQAYHSSESGAPAGYILTLPDGFTIYHAGDTGIFAGMELWGRLYSIDV ALLPIGGVFTMDAKQAALACRLLRARSVVPMHWGTFPVLEGNTARFKEQLMNFAPDCRLFDMKPGETLTLETASEGCACD
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y151_DESDG (Q317E4)
Other databases:
- EMBL: CP000112 - RefSeq: YP_386647.1 - ProteinModelPortal: Q317E4 - STRING: Q317E4 - GeneID: 3755302 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_0151 - NMPDR: fig|207559.3.peg.807 - eggNOG: COG2220 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: CLSK706313 - BioCyc: DDES207559:DDE_0151-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 25521; Mature: 25521
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLLTWHGHANFQIATEGANILIDPFFEGNPSAAAAWQGIAKPDLVLVTHDHGDHVGQT CCCEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHH VEICRETGAMMGAIVGTAEKLAAAGVPQQQVLNGIGFNIGGTVLHNGVAVTMTQAYHSSE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCEEEEEEEHHCCCC SGAPAGYILTLPDGFTIYHAGDTGIFAGMELWGRLYSIDVALLPIGGVFTMDAKQAALAC CCCCCEEEEECCCCEEEEECCCCCEEHHHHHHHHHEEEEEEEEECCCEEEECHHHHHHHH RLLRARSVVPMHWGTFPVLEGNTARFKEQLMNFAPDCRLFDMKPGETLTLETASEGCACD HHHHHCCCCEECCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCC >Mature Secondary Structure MQHLLTWHGHANFQIATEGANILIDPFFEGNPSAAAAWQGIAKPDLVLVTHDHGDHVGQT CCCEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHH VEICRETGAMMGAIVGTAEKLAAAGVPQQQVLNGIGFNIGGTVLHNGVAVTMTQAYHSSE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEECCEEEEEEEHHCCCC SGAPAGYILTLPDGFTIYHAGDTGIFAGMELWGRLYSIDVALLPIGGVFTMDAKQAALAC CCCCCEEEEECCCCEEEEECCCCCEEHHHHHHHHHEEEEEEEEECCCEEEECHHHHHHHH RLLRARSVVPMHWGTFPVLEGNTARFKEQLMNFAPDCRLFDMKPGETLTLETASEGCACD HHHHHCCCCEECCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA