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The map label for this gene is yfgC [H]

Identifier: 78355154

GI number: 78355154

Start: 97828

End: 98616

Strand: Direct

Name: yfgC [H]

Synonym: Dde_0107

Alternate gene names: 78355154

Gene position: 97828-98616 (Clockwise)

Preceding gene: 78355152

Following gene: 78355155

Centisome position: 2.62

GC content: 59.32

Gene sequence:

>789_bases
ATGCGCAGGAATATGAAAAAATGGCTTTTTGCCGCACTGACAGTGGCGGTACTGGTTGTCTCTGCCTGTGCCAAGGCGCC
GTATACCGGCCGCAACCAGTTTATCATGATGGATTCGCAGCAGGAAATGGCGCTGGGGGCCTCTGAAGCGCAGAAAGTGA
TCAAGTCGGAGCAGATTGATACCACAAGCGACTATGCCCGTGCCGTGACCCGCGTGGGGCGCCGCATAGCGGCCGTGGCC
GGACACCCTGAATATAAATGGGAATTTCATACCGTCAAAAAAGACGTACCCAACGCCTTCTGCCTGCCGGGCGGAAAAAT
ATTTGTGTATACAGGGCTGTTTGAAGCCGCCAAAGACGATGCGCAGCTGGCCGCTGTTATCGGTCACGAAGTGGGCCACG
CCATCGCGCGGCACGGGGCGGAGCGGTATTCCACACAGGTTGTGGCGCAGCTGGGGCAGCTGGGGACGGCCATCGCCGTG
GGCTCCCAGACATCGCCTGAGGTGGCGCAGGCCGCGGTGGCGGCGTATGGTATAGGTGTGGGCGTGGGCATACTGCTGCC
CTACAGCCGCACCCACGAATACGAGGCCGACCGGATAGGTCTTATTCTTATGGCCAAGGCGGGGTACAACCCGGAAGCCG
CGCTGACTTTCTGGCAGAACATGGCTGCCAAGGGCGGCAAAAAACCGCCGGAGTTCCTTTCTACCCACCCTGCTGATGAA
AACCGCATAAAAGCCATCCGCCAGCTGCTGCCCGAGGCAAAAGGCTACTACCGGCCCGCATCTTCATAA

Upstream 100 bases:

>100_bases
GGGAAGATACGACAAATGCCAACAGCGTCAAGTTTGACGTGCCGCGCTTTGCCCGCTGAGGGCAGTCCGCGGCGGGCAGG
AAGCCAGTAAGGACGGGATT

Downstream 100 bases:

>100_bases
CCGTACGGCCGTGTCGGAGAATCGTCGGCCCTGCATGTTCCGGTTGCTGTCCATGTTTTTTTGCAAGGGTAACATGCCGG
AAAAAAGAGGGTATGAAATA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRRNMKKWLFAALTVAVLVVSACAKAPYTGRNQFIMMDSQQEMALGASEAQKVIKSEQIDTTSDYARAVTRVGRRIAAVA
GHPEYKWEFHTVKKDVPNAFCLPGGKIFVYTGLFEAAKDDAQLAAVIGHEVGHAIARHGAERYSTQVVAQLGQLGTAIAV
GSQTSPEVAQAAVAAYGIGVGVGILLPYSRTHEYEADRIGLILMAKAGYNPEAALTFWQNMAAKGGKKPPEFLSTHPADE
NRIKAIRQLLPEAKGYYRPASS

Sequences:

>Translated_262_residues
MRRNMKKWLFAALTVAVLVVSACAKAPYTGRNQFIMMDSQQEMALGASEAQKVIKSEQIDTTSDYARAVTRVGRRIAAVA
GHPEYKWEFHTVKKDVPNAFCLPGGKIFVYTGLFEAAKDDAQLAAVIGHEVGHAIARHGAERYSTQVVAQLGQLGTAIAV
GSQTSPEVAQAAVAAYGIGVGVGILLPYSRTHEYEADRIGLILMAKAGYNPEAALTFWQNMAAKGGKKPPEFLSTHPADE
NRIKAIRQLLPEAKGYYRPASS
>Mature_262_residues
MRRNMKKWLFAALTVAVLVVSACAKAPYTGRNQFIMMDSQQEMALGASEAQKVIKSEQIDTTSDYARAVTRVGRRIAAVA
GHPEYKWEFHTVKKDVPNAFCLPGGKIFVYTGLFEAAKDDAQLAAVIGHEVGHAIARHGAERYSTQVVAQLGQLGTAIAV
GSQTSPEVAQAAVAAYGIGVGVGILLPYSRTHEYEADRIGLILMAKAGYNPEAALTFWQNMAAKGGKKPPEFLSTHPADE
NRIKAIRQLLPEAKGYYRPASS

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=277, Percent_Identity=31.7689530685921, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI1788840, Length=256, Percent_Identity=26.953125, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87081800, Length=267, Percent_Identity=25.4681647940075, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=253, Percent_Identity=30.0395256916996, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 28335; Mature: 28335

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNMKKWLFAALTVAVLVVSACAKAPYTGRNQFIMMDSQQEMALGASEAQKVIKSEQID
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHHHCCC
TTSDYARAVTRVGRRIAAVAGHPEYKWEFHTVKKDVPNAFCLPGGKIFVYTGLFEAAKDD
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCEECCCCEEEEEECHHHHCCCH
AQLAAVIGHEVGHAIARHGAERYSTQVVAQLGQLGTAIAVGSQTSPEVAQAAVAAYGIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH
GVGILLPYSRTHEYEADRIGLILMAKAGYNPEAALTFWQNMAAKGGKKPPEFLSTHPADE
HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
NRIKAIRQLLPEAKGYYRPASS
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRNMKKWLFAALTVAVLVVSACAKAPYTGRNQFIMMDSQQEMALGASEAQKVIKSEQID
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHHHCCC
TTSDYARAVTRVGRRIAAVAGHPEYKWEFHTVKKDVPNAFCLPGGKIFVYTGLFEAAKDD
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCEECCCCEEEEEECHHHHCCCH
AQLAAVIGHEVGHAIARHGAERYSTQVVAQLGQLGTAIAVGSQTSPEVAQAAVAAYGIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH
GVGILLPYSRTHEYEADRIGLILMAKAGYNPEAALTFWQNMAAKGGKKPPEFLSTHPADE
HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
NRIKAIRQLLPEAKGYYRPASS
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]