| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yhcP [C]
Identifier: 78355144
GI number: 78355144
Start: 87741
End: 88784
Strand: Direct
Name: yhcP [C]
Synonym: Dde_0097
Alternate gene names: 78355144
Gene position: 87741-88784 (Clockwise)
Preceding gene: 78355143
Following gene: 78355147
Centisome position: 2.35
GC content: 58.05
Gene sequence:
>1044_bases ATGGCATATCACGATCCCACATCAGGCACTGCGCATGTGCGCCACGGTTTCAAAACCGGCCTTGCGGCGGTGCTTTCCTA CTGGCTGGCAGAGTATTTCGGCTTCAAGTTCGGGTACTGGGCCGCCATATCAGCCGTTATCGTCATGCAGATGAACGTGG CGGATTCATTGCAGATGGGGTGGTACCGGTTTACGGGGACCGCTGTGGGGGCCGTCATCGGGGTTTTTGCCATTCTGGCG TTTCCCGATACGCTGCCCATGCATCTGCTGTCGCTTTTTGTTTCTGTGGCGTTCTGCGCATACATGACCCGGTACAATGC CCGGTACCGTATGGCTGCCATCACGGTATGCATCGTGGTGCTGGCCAGTTACGGGCAGCCGCAGCCTGTCATGTTCGGTT TGTTTCGTGTGCTGGAAATCACCGTGGGGGTAGGGTGTGCGTTTATTGTTTCCGTCACGTTGTGGCCCCAGCGGGTGGGC GAAGTGCTGCGCCAGCGTCTGCGTGCGCAGTTTGCCGAAGGTGCCCGTCTGTACCAGCTGATGATGGAGGCATTCATTGA TTCGCAGAAAGAACTGGATGCCGGCATGCTGGACGGCTTCAATGCCGGAGTGCTGGAAGACAAGACCCTGTACCGCAAGG TGGCCAGCCACGAGCGGATTCTGTACCACGACGATGTCCGGCTGCTTTCGCTGAAGGTCGATACGCTGGCCAAGTGTGCG GCTCACCTGCGCGCCATGCTGCACGCCCTTAATAACACGCAGGGCGAAGGGTATGACGTGATTATGAAGCATGAGCTGCG CACACTGGCAGAAGCCACCATGGAAGGCATGAAAGCCATCGGCGCCGGAGAGGTGCCCTGTACGGAGCATCTGGAGAGTG CGTTGCAGGCGTGTGAAACACGGCTTGCCGCACTGCGCAGCGAAGGCGCCACCCGCCGCTTTTATCTGCAGAAGCTGCTG CAGTTTTTTGCTTTTTATCACAGCATACAGTTTATGGCGCAGGACCTGCTGCACTATGCACGCTGCATGCGCGAATCTGC CTGA
Upstream 100 bases:
>100_bases GCTATTATCAACTGCGTATGGGACCGGCCCATCATAGACAAGGATATTCTGGCGCGCGACTAGCTGCGGGCAGCGCCGTC GCGGTTTACTCAGGTTATAT
Downstream 100 bases:
>100_bases TTAACCTGTTTAACGTTTTTTTGCGGCCTGCTTACGCGACAGGGCCTGCGGTGGCAGGCCCTGCGTAAATACCGGCGCAG ACAGGTGCGGCTATGAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAYHDPTSGTAHVRHGFKTGLAAVLSYWLAEYFGFKFGYWAAISAVIVMQMNVADSLQMGWYRFTGTAVGAVIGVFAILA FPDTLPMHLLSLFVSVAFCAYMTRYNARYRMAAITVCIVVLASYGQPQPVMFGLFRVLEITVGVGCAFIVSVTLWPQRVG EVLRQRLRAQFAEGARLYQLMMEAFIDSQKELDAGMLDGFNAGVLEDKTLYRKVASHERILYHDDVRLLSLKVDTLAKCA AHLRAMLHALNNTQGEGYDVIMKHELRTLAEATMEGMKAIGAGEVPCTEHLESALQACETRLAALRSEGATRRFYLQKLL QFFAFYHSIQFMAQDLLHYARCMRESA
Sequences:
>Translated_347_residues MAYHDPTSGTAHVRHGFKTGLAAVLSYWLAEYFGFKFGYWAAISAVIVMQMNVADSLQMGWYRFTGTAVGAVIGVFAILA FPDTLPMHLLSLFVSVAFCAYMTRYNARYRMAAITVCIVVLASYGQPQPVMFGLFRVLEITVGVGCAFIVSVTLWPQRVG EVLRQRLRAQFAEGARLYQLMMEAFIDSQKELDAGMLDGFNAGVLEDKTLYRKVASHERILYHDDVRLLSLKVDTLAKCA AHLRAMLHALNNTQGEGYDVIMKHELRTLAEATMEGMKAIGAGEVPCTEHLESALQACETRLAALRSEGATRRFYLQKLL QFFAFYHSIQFMAQDLLHYARCMRESA >Mature_346_residues AYHDPTSGTAHVRHGFKTGLAAVLSYWLAEYFGFKFGYWAAISAVIVMQMNVADSLQMGWYRFTGTAVGAVIGVFAILAF PDTLPMHLLSLFVSVAFCAYMTRYNARYRMAAITVCIVVLASYGQPQPVMFGLFRVLEITVGVGCAFIVSVTLWPQRVGE VLRQRLRAQFAEGARLYQLMMEAFIDSQKELDAGMLDGFNAGVLEDKTLYRKVASHERILYHDDVRLLSLKVDTLAKCAA HLRAMLHALNNTQGEGYDVIMKHELRTLAEATMEGMKAIGAGEVPCTEHLESALQACETRLAALRSEGATRRFYLQKLLQ FFAFYHSIQFMAQDLLHYARCMRESA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38879; Mature: 38748
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHDPTSGTAHVRHGFKTGLAAVLSYWLAEYFGFKFGYWAAISAVIVMQMNVADSLQMG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC WYRFTGTAVGAVIGVFAILAFPDTLPMHLLSLFVSVAFCAYMTRYNARYRMAAITVCIVV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LASYGQPQPVMFGLFRVLEITVGVGCAFIVSVTLWPQRVGEVLRQRLRAQFAEGARLYQL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEAFIDSQKELDAGMLDGFNAGVLEDKTLYRKVASHERILYHDDVRLLSLKVDTLAKCA HHHHHHCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH AHLRAMLHALNNTQGEGYDVIMKHELRTLAEATMEGMKAIGAGEVPCTEHLESALQACET HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RLAALRSEGATRRFYLQKLLQFFAFYHSIQFMAQDLLHYARCMRESA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYHDPTSGTAHVRHGFKTGLAAVLSYWLAEYFGFKFGYWAAISAVIVMQMNVADSLQMG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC WYRFTGTAVGAVIGVFAILAFPDTLPMHLLSLFVSVAFCAYMTRYNARYRMAAITVCIVV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LASYGQPQPVMFGLFRVLEITVGVGCAFIVSVTLWPQRVGEVLRQRLRAQFAEGARLYQL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEAFIDSQKELDAGMLDGFNAGVLEDKTLYRKVASHERILYHDDVRLLSLKVDTLAKCA HHHHHHCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH AHLRAMLHALNNTQGEGYDVIMKHELRTLAEATMEGMKAIGAGEVPCTEHLESALQACET HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RLAALRSEGATRRFYLQKLLQFFAFYHSIQFMAQDLLHYARCMRESA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA