Click here to switch to the map view.

The map label for this gene is 78355100

Identifier: 78355100

GI number: 78355100

Start: 41412

End: 42143

Strand: Direct

Name: 78355100

Synonym: Dde_0053

Alternate gene names: NA

Gene position: 41412-42143 (Clockwise)

Preceding gene: 78355098

Following gene: 78355102

Centisome position: 1.11

GC content: 51.23

Gene sequence:

>732_bases
ATGTCAAATGTCCTGTTGGCTTTATTGTCATTTGTTGTTCCGGGGGCAGGTCAGATAGTTAAGGGGAAAGTGTCTAAGGC
CCTGATTCTGGCATCAGGCAGCTCAGCCGGTTATTTTGTTTTGAACGCTGCCGTGGCACTAAGCAATGACCGGTACTTGG
CGCTGGTCGTTTTTGTAGTGCTGCTGGATACTGCCATCCGCTTATACTCCGCTGTTAACGCAGCGCGTCTGAATAAAGCT
GCAGATGCGAAAGGTAGTGCAGGGAAATGGTCAAGGCTGGCGCTAGTTGCGGGGCTTGCAGCGGCAACTCTCGGACCGGG
CAGAGAATTTCCTGCGGGTAGATTACATGCATTTTCCATAGCCTCCGGCAGTACGATGTTGTCGCCAGAGCTTGAGGCAG
GAACAGCGCTATTGGGCGTCCCGTATCAATACTGGGAGCAAGAGCCTGTCAAAGGTGATTTTGTGATAATTGAGCAAAAA
ACAACAGGCCCTTTTAGCAAGAGTCCTTTTATATTACAGGTTCATGGCGTTGCGGGCGAAAAATGCCCTGCGTCTGTCTG
CACGCGCTCAGGAACGTTTGCTGACGCAGGCGATGGTTACCTGATACCCAAGGGGCACTATGTTGTCGGTGCCCGTAATC
CGCAAAACTTTCAGACTCTCGTTTCTGAAAAGGAAATAACGGCAAAAGCCGGATACGTGTACTGGCCCCTGAACAAGATG
CGCAAGCTGTGA

Upstream 100 bases:

>100_bases
TTTATGTCGATAACTAAACAGCTTATGGCAAAGGTGCAGATCATGTGCTGTTGCTGTTTCTGATAAAAAAATCAATCTTT
CACGGGAACTTCATATAATT

Downstream 100 bases:

>100_bases
TCTGATGGCAGCTGGCTGCGCCGTATACAGGCTGCAGTATGCGGGCAACCTTCGCAGATATAAACTCCGGCAAGGCTGCC
GGCATGCACAGGCATGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSNVLLALLSFVVPGAGQIVKGKVSKALILASGSSAGYFVLNAAVALSNDRYLALVVFVVLLDTAIRLYSAVNAARLNKA
ADAKGSAGKWSRLALVAGLAAATLGPGREFPAGRLHAFSIASGSTMLSPELEAGTALLGVPYQYWEQEPVKGDFVIIEQK
TTGPFSKSPFILQVHGVAGEKCPASVCTRSGTFADAGDGYLIPKGHYVVGARNPQNFQTLVSEKEITAKAGYVYWPLNKM
RKL

Sequences:

>Translated_243_residues
MSNVLLALLSFVVPGAGQIVKGKVSKALILASGSSAGYFVLNAAVALSNDRYLALVVFVVLLDTAIRLYSAVNAARLNKA
ADAKGSAGKWSRLALVAGLAAATLGPGREFPAGRLHAFSIASGSTMLSPELEAGTALLGVPYQYWEQEPVKGDFVIIEQK
TTGPFSKSPFILQVHGVAGEKCPASVCTRSGTFADAGDGYLIPKGHYVVGARNPQNFQTLVSEKEITAKAGYVYWPLNKM
RKL
>Mature_242_residues
SNVLLALLSFVVPGAGQIVKGKVSKALILASGSSAGYFVLNAAVALSNDRYLALVVFVVLLDTAIRLYSAVNAARLNKAA
DAKGSAGKWSRLALVAGLAAATLGPGREFPAGRLHAFSIASGSTMLSPELEAGTALLGVPYQYWEQEPVKGDFVIIEQKT
TGPFSKSPFILQVHGVAGEKCPASVCTRSGTFADAGDGYLIPKGHYVVGARNPQNFQTLVSEKEITAKAGYVYWPLNKMR
KL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25603; Mature: 25472

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVLLALLSFVVPGAGQIVKGKVSKALILASGSSAGYFVLNAAVALSNDRYLALVVFVV
CCHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHH
LLDTAIRLYSAVNAARLNKAADAKGSAGKWSRLALVAGLAAATLGPGREFPAGRLHAFSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
ASGSTMLSPELEAGTALLGVPYQYWEQEPVKGDFVIIEQKTTGPFSKSPFILQVHGVAGE
ECCCEEECCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCC
KCPASVCTRSGTFADAGDGYLIPKGHYVVGARNPQNFQTLVSEKEITAKAGYVYWPLNKM
CCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHEECCCEEEECHHHH
RKL
HCC
>Mature Secondary Structure 
SNVLLALLSFVVPGAGQIVKGKVSKALILASGSSAGYFVLNAAVALSNDRYLALVVFVV
CHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHH
LLDTAIRLYSAVNAARLNKAADAKGSAGKWSRLALVAGLAAATLGPGREFPAGRLHAFSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
ASGSTMLSPELEAGTALLGVPYQYWEQEPVKGDFVIIEQKTTGPFSKSPFILQVHGVAGE
ECCCEEECCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCC
KCPASVCTRSGTFADAGDGYLIPKGHYVVGARNPQNFQTLVSEKEITAKAGYVYWPLNKM
CCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHEECCCEEEECHHHH
RKL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA