Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is asrA [H]
Identifier: 78224620
GI number: 78224620
Start: 3849991
End: 3851019
Strand: Direct
Name: asrA [H]
Synonym: Gmet_3430
Alternate gene names: 78224620
Gene position: 3849991-3851019 (Clockwise)
Preceding gene: 78224619
Following gene: 78224621
Centisome position: 96.31
GC content: 65.31
Gene sequence:
>1029_bases ATGCCAAAGACCATCTCCGAACAGAATCTCCTGCGCCTCATCGACACCCTGGTGAACGAAGGAAAGCGGGTCATCGGCCC GAAGGCCGCCGGCACCATGACCCTCTACGAGCCCCTCGCAACAGGCGAGGAGCTGAACCTCGGGGAGCTTCCCCGCCGCT CCGCCAAGGAGACCTTCTTTCCCCTGTGCGAGACCATCCTCACCTACGAGCGGGACAGGGAGGGGGTGCGGGTCACCGAC GTGGACCCCGGCGCCATCCCCGAGACGGTGCTCGTCGCTGCCCGCCCCTGCGACGTGGCCGCCGCGCCGGTTCTGGACAG CGTCTTTTCCTGGGATTACCAGGATGAGTTCTACCTCTCGCGCCGGGGAAAGACCACCATCATCGGCCTGGCCTGCGCGA GGGCCGACGACGCCTGCTTCTGCACCGCCGTGGGGCTTTCCACCAATGACACCAAGGGGAGCGACCTCTTTCTCACCACC CTCACCGGCGGGGGCTACCGCTGCGACGTCATCACCGACAAGGGGATGGCGCTTCTTGCCGCCCATGGTGGCCTCTTTGC CGAGGGTGACGGCACCCCCGCACCCCTAGCCGAGCCGGCATTGGGGAAGCTCGACCTGGAGAAGATCAAACAGTGGCTCG ACAACCACTTCGAGGACCCGCTCTGGGAGGAAATCGCCGAGCGCTGCGCCGGCTGCGGCGCCTGCGCATTCCTGTGCCCC GCCTGCCACTGCTTCGACATCAACGATGAGGGGGGCGAGAAGAAGGGAGCGCGGAGAAAATCGTGGGATGCCTGCGGCTT CGGTAAGTTCACCAACCACGCCTCGGGCCACAACCCCCGGGATGTGCAGCCCCAGCGCTACCGCAACCGGATCATGCACA AGTTCAAGTACTACGTGGACAAGTTCGACCAACGCCTCTGCACCGGCTGCGGCAGGTGCATCCGCGCCTGTCCCGTGGGG ATCGACATCGCGGAAATTCTTTCCGCGATCGGGACCAGGGACCAGGGACCAGGGACCGGCAAAGACTAA
Upstream 100 bases:
>100_bases GAAAAACAACCAGAAGTGGGATCACTCGAAATTCACTCCACTTCTGCACTAATTTGTTGACTGAGAACACGGTTGCTCTG TGTTATCAAAAGGGTTATCC
Downstream 100 bases:
>100_bases GAAAGGAACCAGGGACCGGAAGCCCTGGACTGGTAAAGATTTTTACTGGTCCCCGGTCCCCGGTCCCCAATCACCGATTT TATGTGCGATCACAGTAAAA
Product: heterodisulfide reductase, iron-sulfur binding subunit
Products: NA
Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPKTISEQNLLRLIDTLVNEGKRVIGPKAAGTMTLYEPLATGEELNLGELPRRSAKETFFPLCETILTYERDREGVRVTD VDPGAIPETVLVAARPCDVAAAPVLDSVFSWDYQDEFYLSRRGKTTIIGLACARADDACFCTAVGLSTNDTKGSDLFLTT LTGGGYRCDVITDKGMALLAAHGGLFAEGDGTPAPLAEPALGKLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCP ACHCFDINDEGGEKKGARRKSWDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVDKFDQRLCTGCGRCIRACPVG IDIAEILSAIGTRDQGPGTGKD
Sequences:
>Translated_342_residues MPKTISEQNLLRLIDTLVNEGKRVIGPKAAGTMTLYEPLATGEELNLGELPRRSAKETFFPLCETILTYERDREGVRVTD VDPGAIPETVLVAARPCDVAAAPVLDSVFSWDYQDEFYLSRRGKTTIIGLACARADDACFCTAVGLSTNDTKGSDLFLTT LTGGGYRCDVITDKGMALLAAHGGLFAEGDGTPAPLAEPALGKLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCP ACHCFDINDEGGEKKGARRKSWDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVDKFDQRLCTGCGRCIRACPVG IDIAEILSAIGTRDQGPGTGKD >Mature_341_residues PKTISEQNLLRLIDTLVNEGKRVIGPKAAGTMTLYEPLATGEELNLGELPRRSAKETFFPLCETILTYERDREGVRVTDV DPGAIPETVLVAARPCDVAAAPVLDSVFSWDYQDEFYLSRRGKTTIIGLACARADDACFCTAVGLSTNDTKGSDLFLTTL TGGGYRCDVITDKGMALLAAHGGLFAEGDGTPAPLAEPALGKLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCPA CHCFDINDEGGEKKGARRKSWDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVDKFDQRLCTGCGRCIRACPVGI DIAEILSAIGTRDQGPGTGKD
Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR014259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37308; Mature: 37176
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTISEQNLLRLIDTLVNEGKRVIGPKAAGTMTLYEPLATGEELNLGELPRRSAKETFF CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHH PLCETILTYERDREGVRVTDVDPGAIPETVLVAARPCDVAAAPVLDSVFSWDYQDEFYLS HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHEE RRGKTTIIGLACARADDACFCTAVGLSTNDTKGSDLFLTTLTGGGYRCDVITDKGMALLA CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEE AHGGLFAEGDGTPAPLAEPALGKLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCP ECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCC ACHCFDINDEGGEKKGARRKSWDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVD CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KFDQRLCTGCGRCIRACPVGIDIAEILSAIGTRDQGPGTGKD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PKTISEQNLLRLIDTLVNEGKRVIGPKAAGTMTLYEPLATGEELNLGELPRRSAKETFF CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHH PLCETILTYERDREGVRVTDVDPGAIPETVLVAARPCDVAAAPVLDSVFSWDYQDEFYLS HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHEE RRGKTTIIGLACARADDACFCTAVGLSTNDTKGSDLFLTTLTGGGYRCDVITDKGMALLA CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEE AHGGLFAEGDGTPAPLAEPALGKLDLEKIKQWLDNHFEDPLWEEIAERCAGCGACAFLCP ECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCC ACHCFDINDEGGEKKGARRKSWDACGFGKFTNHASGHNPRDVQPQRYRNRIMHKFKYYVD CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KFDQRLCTGCGRCIRACPVGIDIAEILSAIGTRDQGPGTGKD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]