Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224588
Identifier: 78224588
GI number: 78224588
Start: 3811888
End: 3812655
Strand: Direct
Name: 78224588
Synonym: Gmet_3398
Alternate gene names: NA
Gene position: 3811888-3812655 (Clockwise)
Preceding gene: 78224587
Following gene: 78224592
Centisome position: 95.36
GC content: 62.63
Gene sequence:
>768_bases ATGCCATTCCTGGACCTGGGCCGGAACAAACAGATCTACTACGAACTCATCGACGGGGAACCGGACCGCCCCCACCTGGT CTTCATCCATGAGGGGCTGGGGTGCGCGGCCATGTGGAAGGGGTTCCCCCACCAGCTCTGCCGGGAAACCGGGTGTCCCG GCCTTCTCTACGACAGTCTCGGCTACGGCAAGTCGTCGCCCCTCGATGGCCCCATGAACCTCCATTTTCTCCACCGTTAT GCCCTGATCGAGTTGCCGGCCGTTATCGAACAGCTGATCCCGGAGAAGGAGTATGTGCTCATCGGCCACTCGGACGGGGG GAGCATCGGCCTCATTGCGGCTGCCGAGAGGCCCCTCCGGCTCAAGGGGCTCATCGCCGAGGCGGCCCATGTATTCGTGG AGGAGAAGACGTTAGCGGGTATCCGGGCCACTGTGGACGCCTTCAGGGCCGGCAAGCTGCGCGGGCTTTTCCGGTATCAC GGAGACAAGACCGAGGAACTCTTCACGGCATGGTCCGGCGCATGGCTCAGCGACGGCTTCAGGCCGTGGAACATCGAGTA TGCCTTGCCCTCAATAGCATGTCCGGTACTGGTTATCCAGGGAACGGAGGACAACTACGGAACGGTAGCCCAGGTGGATA CGATCATGGCAAAGGTGCCGGATGCCCGGAAGGTGATGATTGAGGGGTGCGGCCATGTGCCGCACTTGGAGAGGAGCGCT GAGGTTCTGGGGCTGATGGCGGAGTTCGTGGAGCGCCTGCCGGCGTGA
Upstream 100 bases:
>100_bases CCGCCATCGGCCAGGCCAGGGAGGTGGAGCCGGGCACCTACAGCGCCTGACGAAGCACGCCCCATCCTGAAAAGACGCAC GAACGAGGAGGACTCTTGCC
Downstream 100 bases:
>100_bases GTCTGGTCCCTCTTCCCTGAAAGAGGGACCAGTGGAACAGATCCCTTGGGGCTATTTGCCGAAAAAGCCCGACATCAGAA TCCGGAGCGCGTGCTTCTCG
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Lactonase; Hydrolase-Related Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Aryl-Ester Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Serine Hydrolase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPFLDLGRNKQIYYELIDGEPDRPHLVFIHEGLGCAAMWKGFPHQLCRETGCPGLLYDSLGYGKSSPLDGPMNLHFLHRY ALIELPAVIEQLIPEKEYVLIGHSDGGSIGLIAAAERPLRLKGLIAEAAHVFVEEKTLAGIRATVDAFRAGKLRGLFRYH GDKTEELFTAWSGAWLSDGFRPWNIEYALPSIACPVLVIQGTEDNYGTVAQVDTIMAKVPDARKVMIEGCGHVPHLERSA EVLGLMAEFVERLPA
Sequences:
>Translated_255_residues MPFLDLGRNKQIYYELIDGEPDRPHLVFIHEGLGCAAMWKGFPHQLCRETGCPGLLYDSLGYGKSSPLDGPMNLHFLHRY ALIELPAVIEQLIPEKEYVLIGHSDGGSIGLIAAAERPLRLKGLIAEAAHVFVEEKTLAGIRATVDAFRAGKLRGLFRYH GDKTEELFTAWSGAWLSDGFRPWNIEYALPSIACPVLVIQGTEDNYGTVAQVDTIMAKVPDARKVMIEGCGHVPHLERSA EVLGLMAEFVERLPA >Mature_254_residues PFLDLGRNKQIYYELIDGEPDRPHLVFIHEGLGCAAMWKGFPHQLCRETGCPGLLYDSLGYGKSSPLDGPMNLHFLHRYA LIELPAVIEQLIPEKEYVLIGHSDGGSIGLIAAAERPLRLKGLIAEAAHVFVEEKTLAGIRATVDAFRAGKLRGLFRYHG DKTEELFTAWSGAWLSDGFRPWNIEYALPSIACPVLVIQGTEDNYGTVAQVDTIMAKVPDARKVMIEGCGHVPHLERSAE VLGLMAEFVERLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28177; Mature: 28046
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLDLGRNKQIYYELIDGEPDRPHLVFIHEGLGCAAMWKGFPHQLCRETGCPGLLYDSL CCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHCCCCEEEECCC GYGKSSPLDGPMNLHFLHRYALIELPAVIEQLIPEKEYVLIGHSDGGSIGLIAAAERPLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCH LKGLIAEAAHVFVEEKTLAGIRATVDAFRAGKLRGLFRYHGDKTEELFTAWSGAWLSDGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCC RPWNIEYALPSIACPVLVIQGTEDNYGTVAQVDTIMAKVPDARKVMIEGCGHVPHLERSA CCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHH EVLGLMAEFVERLPA HHHHHHHHHHHHCCC >Mature Secondary Structure PFLDLGRNKQIYYELIDGEPDRPHLVFIHEGLGCAAMWKGFPHQLCRETGCPGLLYDSL CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHCCCCEEEECCC GYGKSSPLDGPMNLHFLHRYALIELPAVIEQLIPEKEYVLIGHSDGGSIGLIAAAERPLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCH LKGLIAEAAHVFVEEKTLAGIRATVDAFRAGKLRGLFRYHGDKTEELFTAWSGAWLSDGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCC RPWNIEYALPSIACPVLVIQGTEDNYGTVAQVDTIMAKVPDARKVMIEGCGHVPHLERSA CCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHH EVLGLMAEFVERLPA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA