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The map label for this gene is 78224329

Identifier: 78224329

GI number: 78224329

Start: 3532906

End: 3534624

Strand: Reverse

Name: 78224329

Synonym: Gmet_3138

Alternate gene names: NA

Gene position: 3534624-3532906 (Counterclockwise)

Preceding gene: 78224330

Following gene: 78224327

Centisome position: 88.42

GC content: 52.41

Gene sequence:

>1719_bases
ATGAGACCTTGGTACCTTGGCAATACGACCGTCCGTAATCCATTCAGGTTGCGCGACGGTCTTTTAGCATTAGCGACCTC
GAACCTTGACGGAAATATCAAGGGACGTGAAAACGAAATCCGTTTCGCTTGGGAACTTCACCACGCTGGCGTAGTGAATA
TTATCCGACCGGATGCAGACGTATCCGACATGGGACGCAAGTGGCGGGCGGCATTGAGCCAGCTTGGCTTTATCTATCCG
GAGCTTCCAACACGAGCCGGGATTGCACAGGAAGAACTGGGCAGACCGTTTATCATTACCCCAAACGGTCGCCGACTGGT
GGAAGCGGAAAGCGTTTCCGGCATTCAGGAATGCTTCCTGCGGTCCTTGGCAGCATATTACATTCCTTCGGTTCTTGAAC
CAAATTACACCTACAATCTGTTTTCCCCTTTACGTCATACCTTGGCGGTGCTGCTGGAACTGGAACGTCGGACCGGTGAA
AGCAGGCTGAACTTTCAGGAAATGGCGCTGTATGTCCAACTTACCGCCACAGAAGCGCCAACGGTTGAAATCGTTGACCA
GATACTGACTTTCCGCGCTGCACGCAGTGAAGCGCAGAACAAGCGGCGTTTCGACCAAGATAGCTATAATGCCGCTGGTG
TGGAGCATCAGTATGCTCCGGGCACATTCCGGGATTATGCAGATACAAACTTCCGGTATCTGAAAGCTACCGGTCTTGTG
CAAAGCAAGGGACGAGGGATTGCTATTGTTCCGGAGAAACACGTCTTTGTTGAACAGCTGGTGGCGGATATTGCCCTTCC
GGATAATGACCTTCGGCTTGTTTCTTCTCTGTGCAACGGCGCTACGCTGCCGACTGATAACCGTGATACGGCTCGGATAG
TCCTTTACGACCTTGTTGCTCAAGTCAATCGCCGGGGTGTCCAGTTCAACATTACCGGAAGAACGGTTGATACTGCTGCC
GATATAGCGATTGTCCGGCACGAAGCCGAAGATATCCTGTCCCGGATGAATGAAGAGGAATATGCGAACCGCCAAGGGGA
AGAATGGCATGAGATAGCGGAGTATATGGACCTGCTTATCAATCCGCGTAGGCGTCGTGGTGGCGATGACGATGAAGAGG
CTATTGCCATTCCACAGGCGGAAGCTCCAGCATACTTCGAGTGGACGCTATGGCGGGCGTTCCTTGCCATTGATAGCCTT
ATGAACCGTCCTTACGAAGCTCGCCGGTTCAAAATTGATCAGGACTTCCTGCCTATTGGACCGGCTCCGGGCGGTGGTCC
TGACCTGCTGTTTGAATTTGAGGATTTTGTGGTCGTCGTTGAGGTCACTCTGACGGAGAATTCCCGGCAGGAAGCTGCTG
AAGGGGAACCAGTCCGACGGCATGTAGCAGACGAGGTTGTCCGGTATGCTGCCCAGAATAAGCCGGTTTATGGGCTGTTC
CTTGCCAAGAAGATTGACAGCAATACCGCTGAAACGTTCCGTATCGGCGTCTGGTATGACCGGGACGATAATAGAATGGG
ACTGGACATTATTCCGCTGACCATAGCCCAGTTTAAGACACTGTTCGAAGCCATGTTCCGTTCGGGCAATGTTAGGGTTG
CAGAAATCCGGGAACTGCTGAATATCTGCACCGGTTTCCGACCGGACCTGCATGCTCCCGAATGGAAGGCTGAAATTGAT
AGAACTGTGCTTGCTCGTGCAGCAGTTTTGACTGCTTGA

Upstream 100 bases:

>100_bases
ACAAGGCAGACGACATGATACTGGTGGAGCACGCTTATGACCTGCTGCAACCGTTGGTGAAAATGGAACAGAAACTTTTC
CGTCTTCTGACTGTTGTCAA

Downstream 100 bases:

>100_bases
TTTATATTGTCCCTGTCCTGCTGCTGCCAAGTCGAAAAGAGACAGTTACCCGATATTCCCCTAGGTTATCGCCCTTCGTG
TATTCCCGACTGTCCCTCGG

Product: type IIs restriction endonuclease

Products: NA

Alternate protein names: Ype IIs Restriction Endonuclease R.AlwI

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MRPWYLGNTTVRNPFRLRDGLLALATSNLDGNIKGRENEIRFAWELHHAGVVNIIRPDADVSDMGRKWRAALSQLGFIYP
ELPTRAGIAQEELGRPFIITPNGRRLVEAESVSGIQECFLRSLAAYYIPSVLEPNYTYNLFSPLRHTLAVLLELERRTGE
SRLNFQEMALYVQLTATEAPTVEIVDQILTFRAARSEAQNKRRFDQDSYNAAGVEHQYAPGTFRDYADTNFRYLKATGLV
QSKGRGIAIVPEKHVFVEQLVADIALPDNDLRLVSSLCNGATLPTDNRDTARIVLYDLVAQVNRRGVQFNITGRTVDTAA
DIAIVRHEAEDILSRMNEEEYANRQGEEWHEIAEYMDLLINPRRRRGGDDDEEAIAIPQAEAPAYFEWTLWRAFLAIDSL
MNRPYEARRFKIDQDFLPIGPAPGGGPDLLFEFEDFVVVVEVTLTENSRQEAAEGEPVRRHVADEVVRYAAQNKPVYGLF
LAKKIDSNTAETFRIGVWYDRDDNRMGLDIIPLTIAQFKTLFEAMFRSGNVRVAEIRELLNICTGFRPDLHAPEWKAEID
RTVLARAAVLTA

Sequences:

>Translated_572_residues
MRPWYLGNTTVRNPFRLRDGLLALATSNLDGNIKGRENEIRFAWELHHAGVVNIIRPDADVSDMGRKWRAALSQLGFIYP
ELPTRAGIAQEELGRPFIITPNGRRLVEAESVSGIQECFLRSLAAYYIPSVLEPNYTYNLFSPLRHTLAVLLELERRTGE
SRLNFQEMALYVQLTATEAPTVEIVDQILTFRAARSEAQNKRRFDQDSYNAAGVEHQYAPGTFRDYADTNFRYLKATGLV
QSKGRGIAIVPEKHVFVEQLVADIALPDNDLRLVSSLCNGATLPTDNRDTARIVLYDLVAQVNRRGVQFNITGRTVDTAA
DIAIVRHEAEDILSRMNEEEYANRQGEEWHEIAEYMDLLINPRRRRGGDDDEEAIAIPQAEAPAYFEWTLWRAFLAIDSL
MNRPYEARRFKIDQDFLPIGPAPGGGPDLLFEFEDFVVVVEVTLTENSRQEAAEGEPVRRHVADEVVRYAAQNKPVYGLF
LAKKIDSNTAETFRIGVWYDRDDNRMGLDIIPLTIAQFKTLFEAMFRSGNVRVAEIRELLNICTGFRPDLHAPEWKAEID
RTVLARAAVLTA
>Mature_572_residues
MRPWYLGNTTVRNPFRLRDGLLALATSNLDGNIKGRENEIRFAWELHHAGVVNIIRPDADVSDMGRKWRAALSQLGFIYP
ELPTRAGIAQEELGRPFIITPNGRRLVEAESVSGIQECFLRSLAAYYIPSVLEPNYTYNLFSPLRHTLAVLLELERRTGE
SRLNFQEMALYVQLTATEAPTVEIVDQILTFRAARSEAQNKRRFDQDSYNAAGVEHQYAPGTFRDYADTNFRYLKATGLV
QSKGRGIAIVPEKHVFVEQLVADIALPDNDLRLVSSLCNGATLPTDNRDTARIVLYDLVAQVNRRGVQFNITGRTVDTAA
DIAIVRHEAEDILSRMNEEEYANRQGEEWHEIAEYMDLLINPRRRRGGDDDEEAIAIPQAEAPAYFEWTLWRAFLAIDSL
MNRPYEARRFKIDQDFLPIGPAPGGGPDLLFEFEDFVVVVEVTLTENSRQEAAEGEPVRRHVADEVVRYAAQNKPVYGLF
LAKKIDSNTAETFRIGVWYDRDDNRMGLDIIPLTIAQFKTLFEAMFRSGNVRVAEIRELLNICTGFRPDLHAPEWKAEID
RTVLARAAVLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64904; Mature: 64904

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPWYLGNTTVRNPFRLRDGLLALATSNLDGNIKGRENEIRFAWELHHAGVVNIIRPDAD
CCCEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC
VSDMGRKWRAALSQLGFIYPELPTRAGIAQEELGRPFIITPNGRRLVEAESVSGIQECFL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEECCCCCEEEEHHHHHHHHHHHH
RSLAAYYIPSVLEPNYTYNLFSPLRHTLAVLLELERRTGESRLNFQEMALYVQLTATEAP
HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCC
TVEIVDQILTFRAARSEAQNKRRFDQDSYNAAGVEHQYAPGTFRDYADTNFRYLKATGLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCE
QSKGRGIAIVPEKHVFVEQLVADIALPDNDLRLVSSLCNGATLPTDNRDTARIVLYDLVA
ECCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
QVNRRGVQFNITGRTVDTAADIAIVRHEAEDILSRMNEEEYANRQGEEWHEIAEYMDLLI
HHHCCCEEEEECCCEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHC
NPRRRRGGDDDEEAIAIPQAEAPAYFEWTLWRAFLAIDSLMNRPYEARRFKIDQDFLPIG
CCHHHCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCC
PAPGGGPDLLFEFEDFVVVVEVTLTENSRQEAAEGEPVRRHVADEVVRYAAQNKPVYGLF
CCCCCCCCEEEEECCEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEE
LAKKIDSNTAETFRIGVWYDRDDNRMGLDIIPLTIAQFKTLFEAMFRSGNVRVAEIRELL
EEECCCCCCCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
NICTGFRPDLHAPEWKAEIDRTVLARAAVLTA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPWYLGNTTVRNPFRLRDGLLALATSNLDGNIKGRENEIRFAWELHHAGVVNIIRPDAD
CCCEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC
VSDMGRKWRAALSQLGFIYPELPTRAGIAQEELGRPFIITPNGRRLVEAESVSGIQECFL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEECCCCCEEEEHHHHHHHHHHHH
RSLAAYYIPSVLEPNYTYNLFSPLRHTLAVLLELERRTGESRLNFQEMALYVQLTATEAP
HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCC
TVEIVDQILTFRAARSEAQNKRRFDQDSYNAAGVEHQYAPGTFRDYADTNFRYLKATGLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCE
QSKGRGIAIVPEKHVFVEQLVADIALPDNDLRLVSSLCNGATLPTDNRDTARIVLYDLVA
ECCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
QVNRRGVQFNITGRTVDTAADIAIVRHEAEDILSRMNEEEYANRQGEEWHEIAEYMDLLI
HHHCCCEEEEECCCEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHC
NPRRRRGGDDDEEAIAIPQAEAPAYFEWTLWRAFLAIDSLMNRPYEARRFKIDQDFLPIG
CCHHHCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCC
PAPGGGPDLLFEFEDFVVVVEVTLTENSRQEAAEGEPVRRHVADEVVRYAAQNKPVYGLF
CCCCCCCCEEEEECCEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEE
LAKKIDSNTAETFRIGVWYDRDDNRMGLDIIPLTIAQFKTLFEAMFRSGNVRVAEIRELL
EEECCCCCCCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
NICTGFRPDLHAPEWKAEIDRTVLARAAVLTA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA