Click here to switch to the map view.

The map label for this gene is 78224313

Identifier: 78224313

GI number: 78224313

Start: 3518392

End: 3518799

Strand: Reverse

Name: 78224313

Synonym: Gmet_3121

Alternate gene names: NA

Gene position: 3518799-3518392 (Counterclockwise)

Preceding gene: 78224314

Following gene: 78224312

Centisome position: 88.03

GC content: 55.15

Gene sequence:

>408_bases
ATGGCGCTCATTACCTGGAACGACAGCCTGAGTGTGAAAGTGAAACAGTTTGATGATCAGCACAAGAAGCTCGTCGAAAT
GCTGAATCAGCTCTTTGACGCCATGAAGGCCGGCAAGGGAAGTCTGGTCGTGGGGGACATCCTCAAGCAGCTCATCGCCT
ACACGCAGACCCATTTCGCCGCCGAGGAACGGCTCATGACGCAGTACGGTTACGCCGACCTCGAGATCCACAAGAAGGAG
CACAACGCCCTTGTCGTGCAGGTTCTTGACCTCCAGAAACAGTTCCAGGACGGGAAAGCGGTTCTCACCCAGAATGTCAT
GACCTTCCTGCGGGACTGGCTCTCCAAGCATATCCAGGGCGACGACAAGAAGTACGGCGTCTTCTTCAACGGCAAGGGAG
TGATGTAG

Upstream 100 bases:

>100_bases
GCCCTCTTATTTTTCTAAAGTTTACCTTCCGTTGGTCGATTGATAGTAGTACGTGACGGCGACGCCGTGCGATCACCATG
ACGAAGGAGGCAATACCTCT

Downstream 100 bases:

>100_bases
CCGCTCGACCCTTCTTCCGGAATTTCTCTTCTTTCAAGCTTTTGTGGAACGGACCGTGCATGAGACACGGATGCCCGGGG
GTATTCCCGCGGCCGGTGAG

Product: hemerythrin-like, metal-binding protein

Products: NA

Alternate protein names: McHr [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MALITWNDSLSVKVKQFDDQHKKLVEMLNQLFDAMKAGKGSLVVGDILKQLIAYTQTHFAAEERLMTQYGYADLEIHKKE
HNALVVQVLDLQKQFQDGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVFFNGKGVM

Sequences:

>Translated_135_residues
MALITWNDSLSVKVKQFDDQHKKLVEMLNQLFDAMKAGKGSLVVGDILKQLIAYTQTHFAAEERLMTQYGYADLEIHKKE
HNALVVQVLDLQKQFQDGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVFFNGKGVM
>Mature_134_residues
ALITWNDSLSVKVKQFDDQHKKLVEMLNQLFDAMKAGKGSLVVGDILKQLIAYTQTHFAAEERLMTQYGYADLEIHKKEH
NALVVQVLDLQKQFQDGKAVLTQNVMTFLRDWLSKHIQGDDKKYGVFFNGKGVM

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 15475; Mature: 15344

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITWNDSLSVKVKQFDDQHKKLVEMLNQLFDAMKAGKGSLVVGDILKQLIAYTQTHFA
CEEEEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
AEERLMTQYGYADLEIHKKEHNALVVQVLDLQKQFQDGKAVLTQNVMTFLRDWLSKHIQG
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKYGVFFNGKGVM
CCCEEEEEECCCCCC
>Mature Secondary Structure 
ALITWNDSLSVKVKQFDDQHKKLVEMLNQLFDAMKAGKGSLVVGDILKQLIAYTQTHFA
EEEEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
AEERLMTQYGYADLEIHKKEHNALVVQVLDLQKQFQDGKAVLTQNVMTFLRDWLSKHIQG
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKYGVFFNGKGVM
CCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA