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The map label for this gene is fliH [H]

Identifier: 78224302

GI number: 78224302

Start: 3508587

End: 3509501

Strand: Reverse

Name: fliH [H]

Synonym: Gmet_3110

Alternate gene names: 78224302

Gene position: 3509501-3508587 (Counterclockwise)

Preceding gene: 78224303

Following gene: 78224301

Centisome position: 87.79

GC content: 67.21

Gene sequence:

>915_bases
ATGTTCTCGTCTAAGGGACGGTCGAGGATCATCAAGGCGGGGGAACCCTCTCTCCACACCCCCCAGGGGTTCACGTTCGG
CCGCATCCTGGCCGAGGCCCCATCCCAGGAGCCACCCGAGGAACTGCCGCCAGGCGCGTCGGGATTCGTTCCCCTCTCCC
TCGGTTTCGTGTCCGGCGGGGAGGAGCTTCCCGATCCTGTCGCGTCCATTGCCGAGGATCCGGATCCGCCCATGCCGAGC
CTGGAGGGGATGATCGTACTCTCCGAGGAGGATTTTCAGGCCAAGGTGGACGAAATCTACCGCAACGGCATGGACGAGGG
GCGTCGCCAGGCGGAACGGGGACTGGCCAACGTCTTCAAGTCTCTGCGCGACGGCGTGTCGGCCGTGACGGGGTTGCGGA
GCCGGCTCCTCAAGGAGAGCGAGGAGGATGTCCTCAAGCTCGCCGTCATGGTGGCCCGCAAGATCGTCCAGCAGGAGATT
ACCCAGGATCCGGCGATCCTCACCTCCATCATCGCCGCGGCAGTGGGGGGGTGTACCGAGCGGGACCGGGTGGTGGTGCG
CCTCAATCCCAACGATTACACGGTGGTGGCGGCAAACCGGCAGGCGTTTCTGGCAGGCCTTGGCGACGACGTTCCCATCA
CCCTCACCCCCGACGACGGGGTGGGGCCGGGGGGCTGCCTCGTGGAGACCGCCACGGGGACGGTGGATGCCCGCATCGAG
TCCCAGCTGGACGAGATCTACCGCACGCTTCTCGAAGAGCGGAGCGCGCCTGTGGAAACGGCATTGCCGGCACCCGCGGA
GCCGGAGCCCCGGGGCGAGCTTCCCCTTCCCGGCGCCGACGACGTGATCCCCTCCTTCTCGGGGCAGGGGGCGTGGCTCA
AGGCCGATGGGGAGACAACCAGTGTCGATGGATAG

Upstream 100 bases:

>100_bases
CGCCTCTCCGACGTGGAAAAGGCCCAGGGGGAGATCATCAAGATCGTCCGCCGTCTGGAGGAAGAGGGGAAAGTGGTGCT
GGCGGGCCGCGGAGGCGACG

Downstream 100 bases:

>100_bases
GATCGACCTCTCCCGCTATCTCACCGCCGTGGAGACCATGACGCCGATCCGCTTTCACGGCAAGGTGACCCAGGTGGTGG
GGCTCGTCATCGAGGGGTAT

Product: flagellar assembly protein fliH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFSSKGRSRIIKAGEPSLHTPQGFTFGRILAEAPSQEPPEELPPGASGFVPLSLGFVSGGEELPDPVASIAEDPDPPMPS
LEGMIVLSEEDFQAKVDEIYRNGMDEGRRQAERGLANVFKSLRDGVSAVTGLRSRLLKESEEDVLKLAVMVARKIVQQEI
TQDPAILTSIIAAAVGGCTERDRVVVRLNPNDYTVVAANRQAFLAGLGDDVPITLTPDDGVGPGGCLVETATGTVDARIE
SQLDEIYRTLLEERSAPVETALPAPAEPEPRGELPLPGADDVIPSFSGQGAWLKADGETTSVDG

Sequences:

>Translated_304_residues
MFSSKGRSRIIKAGEPSLHTPQGFTFGRILAEAPSQEPPEELPPGASGFVPLSLGFVSGGEELPDPVASIAEDPDPPMPS
LEGMIVLSEEDFQAKVDEIYRNGMDEGRRQAERGLANVFKSLRDGVSAVTGLRSRLLKESEEDVLKLAVMVARKIVQQEI
TQDPAILTSIIAAAVGGCTERDRVVVRLNPNDYTVVAANRQAFLAGLGDDVPITLTPDDGVGPGGCLVETATGTVDARIE
SQLDEIYRTLLEERSAPVETALPAPAEPEPRGELPLPGADDVIPSFSGQGAWLKADGETTSVDG
>Mature_304_residues
MFSSKGRSRIIKAGEPSLHTPQGFTFGRILAEAPSQEPPEELPPGASGFVPLSLGFVSGGEELPDPVASIAEDPDPPMPS
LEGMIVLSEEDFQAKVDEIYRNGMDEGRRQAERGLANVFKSLRDGVSAVTGLRSRLLKESEEDVLKLAVMVARKIVQQEI
TQDPAILTSIIAAAVGGCTERDRVVVRLNPNDYTVVAANRQAFLAGLGDDVPITLTPDDGVGPGGCLVETATGTVDARIE
SQLDEIYRTLLEERSAPVETALPAPAEPEPRGELPLPGADDVIPSFSGQGAWLKADGETTSVDG

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 32210; Mature: 32210

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSKGRSRIIKAGEPSLHTPQGFTFGRILAEAPSQEPPEELPPGASGFVPLSLGFVSGG
CCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECCC
EELPDPVASIAEDPDPPMPSLEGMIVLSEEDFQAKVDEIYRNGMDEGRRQAERGLANVFK
CCCCHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SLRDGVSAVTGLRSRLLKESEEDVLKLAVMVARKIVQQEITQDPAILTSIIAAAVGGCTE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RDRVVVRLNPNDYTVVAANRQAFLAGLGDDVPITLTPDDGVGPGGCLVETATGTVDARIE
CCEEEEEECCCCEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHHH
SQLDEIYRTLLEERSAPVETALPAPAEPEPRGELPLPGADDVIPSFSGQGAWLKADGETT
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
SVDG
CCCC
>Mature Secondary Structure
MFSSKGRSRIIKAGEPSLHTPQGFTFGRILAEAPSQEPPEELPPGASGFVPLSLGFVSGG
CCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECCC
EELPDPVASIAEDPDPPMPSLEGMIVLSEEDFQAKVDEIYRNGMDEGRRQAERGLANVFK
CCCCHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SLRDGVSAVTGLRSRLLKESEEDVLKLAVMVARKIVQQEITQDPAILTSIIAAAVGGCTE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RDRVVVRLNPNDYTVVAANRQAFLAGLGDDVPITLTPDDGVGPGGCLVETATGTVDARIE
CCEEEEEECCCCEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHHH
SQLDEIYRTLLEERSAPVETALPAPAEPEPRGELPLPGADDVIPSFSGQGAWLKADGETT
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
SVDG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]