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The map label for this gene is 78224276

Identifier: 78224276

GI number: 78224276

Start: 3480960

End: 3482117

Strand: Reverse

Name: 78224276

Synonym: Gmet_3084

Alternate gene names: NA

Gene position: 3482117-3480960 (Counterclockwise)

Preceding gene: 78224277

Following gene: 78224275

Centisome position: 87.11

GC content: 65.8

Gene sequence:

>1158_bases
GTGGATCAGCCGGACGACAACAGGCTCAGGGGGATCATTCTCAACCGGATTCGGGAGCAGGGGCGAATTCCCTTTGCCGA
CTTCATGGCGATGTGCCTCTACGAGCCGGGGCTCGGCTACTACACCTCCCCCGGCCGCAAGGTGGGGGCCGAGGGGGATT
TCTACACCAGCATCAACGTCCACTCCGTTTTCGGACGCCTCATTGCCCGGGAGATCTGCCGCATGTGGGAGGAGATGGGG
CGCCCCGCCTCCTTCGACATCGTGGAGGCCGGGGCAGGCCACGGCCGTCTCGCCACCGATGTCATCGACGCCATCCAGGA
GCTGAACCCCACCCTCTACGACGGCATCCGCCTCACCCTCATCGAGGCCGAGCCGAGCCTTGCCGCAGTGCAGGGGGAGC
TCCTCGCCCCGCATCTTCCCAAGGTCTCCTGGAGCACCCCCGCCGACCTGGCCGAGGGGCGGCTCCGGTTCACCGGCTGC
CTCTACTCCAACGAACTGATCGACTCCTTCCCGCCCCACCTGGTCGAAATGGGCCCCGAGGGGCTGCGCGAGGTCTTTGT
CGCGGCCGAGGGGGACCAGTTCTCAGAAATCCTCGACCTCCCCTCAACGCCGGAGCTGGAGGCGTACCTCTCCCGTCTCG
GCATCACCTTCGCCGTGGGACAGCGGGCCGAGATCAACCTGAACGCCGTCCGGTGGCTTGAATCGGTGGCCACTGCCTTG
GAACGGGGCTTCGTCCTCACCATCGACTACGGCTACCTGGCCCCCGAGCTCTACGGCCCCATGCGCCTGAACGGCACCCT
CCTCTGCTACTACCGCCATACCATCGAAGAGAACCCCTACATCCGGATCGGTCTCCAGGACATGACCACCCACGTGGACT
TCACCACCCTTGCCGCGCGGGGGGAGGAACTGGGGCTGCGCAAGGTCTGGTACGGCGAGCAGTACCGCTTCCTGGTGGCC
ACCGGCATGATGGAGGAGCTCATGGCCCTGGAGGCCGCCGCCACATCGGAAAAGGAGCAGATCGCCATCCGCCTCGCCCT
CAAGAAGCTCATCCTCCCCGAGGGGGGGATGGGGGACACCTTCAAGGTCCTCGTCCAGGCGAAAGGGGTCGAAAACCCCC
GGCTCCTCTGCATGCGCGACTGGGGCAAGCTCTTTTGA

Upstream 100 bases:

>100_bases
CGTTTCCCTTCTTGCACTTTCATCGTTACCGTTGTGCCACCCCTGCATTGACAAACCCATCCCCATCCTCTATAACTGAG
CTTTTTTCGGGAGGTTTTGC

Downstream 100 bases:

>100_bases
CACGGGGCCTTCCGATGATAGACTCTACCCGTAAGGGGAGGGGGTAACGGTGAGCGGGATTCGCGCCCTGGTTTTCGACC
TGGACGGCACCCTCTACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDQPDDNRLRGIILNRIREQGRIPFADFMAMCLYEPGLGYYTSPGRKVGAEGDFYTSINVHSVFGRLIAREICRMWEEMG
RPASFDIVEAGAGHGRLATDVIDAIQELNPTLYDGIRLTLIEAEPSLAAVQGELLAPHLPKVSWSTPADLAEGRLRFTGC
LYSNELIDSFPPHLVEMGPEGLREVFVAAEGDQFSEILDLPSTPELEAYLSRLGITFAVGQRAEINLNAVRWLESVATAL
ERGFVLTIDYGYLAPELYGPMRLNGTLLCYYRHTIEENPYIRIGLQDMTTHVDFTTLAARGEELGLRKVWYGEQYRFLVA
TGMMEELMALEAAATSEKEQIAIRLALKKLILPEGGMGDTFKVLVQAKGVENPRLLCMRDWGKLF

Sequences:

>Translated_385_residues
MDQPDDNRLRGIILNRIREQGRIPFADFMAMCLYEPGLGYYTSPGRKVGAEGDFYTSINVHSVFGRLIAREICRMWEEMG
RPASFDIVEAGAGHGRLATDVIDAIQELNPTLYDGIRLTLIEAEPSLAAVQGELLAPHLPKVSWSTPADLAEGRLRFTGC
LYSNELIDSFPPHLVEMGPEGLREVFVAAEGDQFSEILDLPSTPELEAYLSRLGITFAVGQRAEINLNAVRWLESVATAL
ERGFVLTIDYGYLAPELYGPMRLNGTLLCYYRHTIEENPYIRIGLQDMTTHVDFTTLAARGEELGLRKVWYGEQYRFLVA
TGMMEELMALEAAATSEKEQIAIRLALKKLILPEGGMGDTFKVLVQAKGVENPRLLCMRDWGKLF
>Mature_385_residues
MDQPDDNRLRGIILNRIREQGRIPFADFMAMCLYEPGLGYYTSPGRKVGAEGDFYTSINVHSVFGRLIAREICRMWEEMG
RPASFDIVEAGAGHGRLATDVIDAIQELNPTLYDGIRLTLIEAEPSLAAVQGELLAPHLPKVSWSTPADLAEGRLRFTGC
LYSNELIDSFPPHLVEMGPEGLREVFVAAEGDQFSEILDLPSTPELEAYLSRLGITFAVGQRAEINLNAVRWLESVATAL
ERGFVLTIDYGYLAPELYGPMRLNGTLLCYYRHTIEENPYIRIGLQDMTTHVDFTTLAARGEELGLRKVWYGEQYRFLVA
TGMMEELMALEAAATSEKEQIAIRLALKKLILPEGGMGDTFKVLVQAKGVENPRLLCMRDWGKLF

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI193211224, Length=394, Percent_Identity=26.6497461928934, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24645885, Length=395, Percent_Identity=27.8481012658228, Blast_Score=95, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43045; Mature: 43045

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPDDNRLRGIILNRIREQGRIPFADFMAMCLYEPGLGYYTSPGRKVGAEGDFYTSINV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHH
HSVFGRLIAREICRMWEEMGRPASFDIVEAGAGHGRLATDVIDAIQELNPTLYDGIRLTL
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHCCEEEEE
IEAEPSLAAVQGELLAPHLPKVSWSTPADLAEGRLRFTGCLYSNELIDSFPPHLVEMGPE
EECCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEECCHHHHHCCCHHHHCCHH
GLREVFVAAEGDQFSEILDLPSTPELEAYLSRLGITFAVGQRAEINLNAVRWLESVATAL
HHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHHH
ERGFVLTIDYGYLAPELYGPMRLNGTLLCYYRHTIEENPYIRIGLQDMTTHVDFTTLAAR
HCCEEEEEECCCCCHHHCCCEEECCEEEEEEEEECCCCCEEEEEHHHHHHHCCHHHHHHC
GEELGLRKVWYGEQYRFLVATGMMEELMALEAAATSEKEQIAIRLALKKLILPEGGMGDT
CHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
FKVLVQAKGVENPRLLCMRDWGKLF
EEEEEEECCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MDQPDDNRLRGIILNRIREQGRIPFADFMAMCLYEPGLGYYTSPGRKVGAEGDFYTSINV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHH
HSVFGRLIAREICRMWEEMGRPASFDIVEAGAGHGRLATDVIDAIQELNPTLYDGIRLTL
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHCCEEEEE
IEAEPSLAAVQGELLAPHLPKVSWSTPADLAEGRLRFTGCLYSNELIDSFPPHLVEMGPE
EECCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEECCHHHHHCCCHHHHCCHH
GLREVFVAAEGDQFSEILDLPSTPELEAYLSRLGITFAVGQRAEINLNAVRWLESVATAL
HHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHHH
ERGFVLTIDYGYLAPELYGPMRLNGTLLCYYRHTIEENPYIRIGLQDMTTHVDFTTLAAR
HCCEEEEEECCCCCHHHCCCEEECCEEEEEEEEECCCCCEEEEEHHHHHHHCCHHHHHHC
GEELGLRKVWYGEQYRFLVATGMMEELMALEAAATSEKEQIAIRLALKKLILPEGGMGDT
CHHCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
FKVLVQAKGVENPRLLCMRDWGKLF
EEEEEEECCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA