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The map label for this gene is yifB [C]

Identifier: 78224261

GI number: 78224261

Start: 3467607

End: 3468533

Strand: Reverse

Name: yifB [C]

Synonym: Gmet_3069

Alternate gene names: 78224261

Gene position: 3468533-3467607 (Counterclockwise)

Preceding gene: 78224262

Following gene: 78224260

Centisome position: 86.77

GC content: 62.78

Gene sequence:

>927_bases
ATGTTAGCCAAGGCCCTCTCCAGCGCTCTCCTCGGGATCGACGCAGTCATCGTCGACGTGGAGGTGGATATCGCCCAGGG
ACTTCCCCAGTTCGCCACCGTGGGGCTTCCTGACGGCGCCGTCAAGGAGAGCAAGGACCGGGTCAAATCAGCCCTCAAGA
ACTCCGGTTACGATTTTCCCCCCCGCAAGATCACCGTCAACCTGGCCCCCGCCGACCTGAAGAAGGAGGGGGCCTCCTTT
GACCTCCCCATCTCCATCGGCATCCTGGCCGCCATCGGCGTCGTCAAGGGAGAGCGGCTCAAGGAGTACCTCCTCCTCGG
CGAGCTCTCCCTGGACGGGAGCGTCAAACCGGTCCGCGGCTGTCTCCCCGTGGCCGTGGCCGCCCGGAATGCGGGGCTGC
GCGGCATCGTGGTTCCCCTGGAAAACGCCCGCGAGGGAGCGGTGGTGGAGGGTATCGAGGTCGTCGGCGTATCGGAACTG
GCCGAAGTAGTGGATTTTCTCAACGGCGACCGGTCCATCGACCCGTCCCGGGTGGACGTGGAGGAGTTCTTCGCACGGAG
CGCCGACGCGGGCGACGACTTCTCCGAGGTGAAGGGGCAGGAACATGCCAAGCGGGCACTGGAGGTGGCGGCCGCCGGGT
CTCACAATATCATTATGATTGGTCCGCCGGGATCCGGCAAGACCATGCTCTCCCGGCGGATTCCGACCATCCTTCCCCGC
ATGTCCTTCGAGGAGGCCATCGAAACGACCAAGGTTTACAGCGTCATGGGGCTCCTTGACCGGGACAATGCGCTCGTGGC
GCAGCGCCCGTTCAGGTCACCCCATCACACTATCTCGGATGTGGGATTGATCGGCGGAGGGAACTGTCATTTTCAGAAGT
TAACGCTACATTTCAATAGTTATTGCTACAACTCCGGTGCGGGGTAA

Upstream 100 bases:

>100_bases
ATGGCGGCCCTGGACGCCGAGAAATATCTGGAGACTCTCTTGTCATGATCGGTCAGGTTCTTCTCACGGCCACTACCCTG
TCTCCGGTCCACGGCCCCTG

Downstream 100 bases:

>100_bases
CGTGCCGGCTGACCTCGACAAAATATACATCCTGCCAAAGATGAGGTCCGAGGATCCCAGAAATCGCTTTCAACTCGTCT
GGATCCTCAACCTAAACGTA

Product: magnesium chelatase, ChlI subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLAKALSSALLGIDAVIVDVEVDIAQGLPQFATVGLPDGAVKESKDRVKSALKNSGYDFPPRKITVNLAPADLKKEGASF
DLPISIGILAAIGVVKGERLKEYLLLGELSLDGSVKPVRGCLPVAVAARNAGLRGIVVPLENAREGAVVEGIEVVGVSEL
AEVVDFLNGDRSIDPSRVDVEEFFARSADAGDDFSEVKGQEHAKRALEVAAAGSHNIIMIGPPGSGKTMLSRRIPTILPR
MSFEEAIETTKVYSVMGLLDRDNALVAQRPFRSPHHTISDVGLIGGGNCHFQKLTLHFNSYCYNSGAG

Sequences:

>Translated_308_residues
MLAKALSSALLGIDAVIVDVEVDIAQGLPQFATVGLPDGAVKESKDRVKSALKNSGYDFPPRKITVNLAPADLKKEGASF
DLPISIGILAAIGVVKGERLKEYLLLGELSLDGSVKPVRGCLPVAVAARNAGLRGIVVPLENAREGAVVEGIEVVGVSEL
AEVVDFLNGDRSIDPSRVDVEEFFARSADAGDDFSEVKGQEHAKRALEVAAAGSHNIIMIGPPGSGKTMLSRRIPTILPR
MSFEEAIETTKVYSVMGLLDRDNALVAQRPFRSPHHTISDVGLIGGGNCHFQKLTLHFNSYCYNSGAG
>Mature_308_residues
MLAKALSSALLGIDAVIVDVEVDIAQGLPQFATVGLPDGAVKESKDRVKSALKNSGYDFPPRKITVNLAPADLKKEGASF
DLPISIGILAAIGVVKGERLKEYLLLGELSLDGSVKPVRGCLPVAVAARNAGLRGIVVPLENAREGAVVEGIEVVGVSEL
AEVVDFLNGDRSIDPSRVDVEEFFARSADAGDDFSEVKGQEHAKRALEVAAAGSHNIIMIGPPGSGKTMLSRRIPTILPR
MSFEEAIETTKVYSVMGLLDRDNALVAQRPFRSPHHTISDVGLIGGGNCHFQKLTLHFNSYCYNSGAG

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=282, Percent_Identity=44.6808510638298, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 32638; Mature: 32638

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKALSSALLGIDAVIVDVEVDIAQGLPQFATVGLPDGAVKESKDRVKSALKNSGYDFP
CCHHHHHHHHHCCEEEEEEEEEHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PRKITVNLAPADLKKEGASFDLPISIGILAAIGVVKGERLKEYLLLGELSLDGSVKPVRG
CCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHC
CLPVAVAARNAGLRGIVVPLENAREGAVVEGIEVVGVSELAEVVDFLNGDRSIDPSRVDV
CHHHHHHHCCCCCEEEEEECCCCCCCCEECCEEEECHHHHHHHHHHHCCCCCCCCCCCCH
EEFFARSADAGDDFSEVKGQEHAKRALEVAAAGSHNIIMIGPPGSGKTMLSRRIPTILPR
HHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCHHHHCC
MSFEEAIETTKVYSVMGLLDRDNALVAQRPFRSPHHTISDVGLIGGGNCHFQKLTLHFNS
CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCEEECCCCCEEEEEEEEEEC
YCYNSGAG
EEECCCCC
>Mature Secondary Structure
MLAKALSSALLGIDAVIVDVEVDIAQGLPQFATVGLPDGAVKESKDRVKSALKNSGYDFP
CCHHHHHHHHHCCEEEEEEEEEHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PRKITVNLAPADLKKEGASFDLPISIGILAAIGVVKGERLKEYLLLGELSLDGSVKPVRG
CCEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHC
CLPVAVAARNAGLRGIVVPLENAREGAVVEGIEVVGVSELAEVVDFLNGDRSIDPSRVDV
CHHHHHHHCCCCCEEEEEECCCCCCCCEECCEEEECHHHHHHHHHHHCCCCCCCCCCCCH
EEFFARSADAGDDFSEVKGQEHAKRALEVAAAGSHNIIMIGPPGSGKTMLSRRIPTILPR
HHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCHHHHCC
MSFEEAIETTKVYSVMGLLDRDNALVAQRPFRSPHHTISDVGLIGGGNCHFQKLTLHFNS
CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCEEECCCCCEEEEEEEEEEC
YCYNSGAG
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]