Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78223516
Identifier: 78223516
GI number: 78223516
Start: 2621142
End: 2622326
Strand: Reverse
Name: 78223516
Synonym: Gmet_2313
Alternate gene names: NA
Gene position: 2622326-2621142 (Counterclockwise)
Preceding gene: 78223517
Following gene: 78223515
Centisome position: 65.6
GC content: 60.76
Gene sequence:
>1185_bases ATGAGCCTTGTCGGGAGTCTTGAAGATCTGGGGCTGGGTGAGATCTTACAGATCATCAGCCTTTCATCAAAGTCGGGGAT TCTGCGGATCAAGAGCCGGGGGCGTGAAGGGACCATCGTCTTCCGTCTCGGTCAGGTGATCCAGGCCACCTCCAGCACCC TCCTGGAGAATATCGGCGAGGTCCTGATCCGCAAGGGGAAGCTCGATCTCGCAACCCTGCGGTCAGCCCTTGCATGCCAG GAAAGCGAGGGATTCCAGGAACGGCTCGGATCGATCCTGGTGCGACGATTCGGCGTGCCTGCCACCGTTGTCGAAGATGT GGCCCGGGAGCAGGTGGAGCGGGTAGTCTATACGCTCTTTGCCTGGGTGGAAGGGACATTCGAATTCATTCTCCAGGACA ACGTGGCCACTGCCGGCACCATCAGGATGGATCCCCTCCAGTTCATGCTGGAACAGGGGCTCAATCCCCGGCTCCTGATG GCGGAGGCGAACCAGGACCGCCGCAGAAGGGATATTCCCCGGGATGAGGAGCCCCTCCGGGTTCCCCAGCCTCCTGAAGG GCGTACCGTGGTGCCTGCGCCGCCGCCGGGGCACATCAACATCGGTGAGGAGCTTCGTCTCGAAATGGGAGAGGAGCTGG CAAAGACCGGTGAGGAGGGTTACAGCCACGCTGACCGGATGACCCTGTTGCGGGGGATGCTCGAAGAGCTGCACAATCCC GAGCTGGGATGCGGCATTACCCTGCTGGTCCTGCGGCTTGCCGCGGAGTTCATGGACCGGGCGGTAATCTTCAGGGTACT GAAGGAAGAGGTTGTGGGGCTCGGTCAGTTTGGCCTCGACGACCGCGGAGGCGGTGCCGACGAGCGGATCAGGTCGCTCC GCATACCGAGAGGAGAGCCATCGCTGTTCAGCGGGGTTATTGAAGCGAAACACCCGGCAGTGGTCCGTCCCGAAGCGAAT GAATGGAATCGTTATCTGTTCGGCCGTATCGGCGTGGAGATTCCCCACGAGGTTTTCCTCGGGCCGATCGTAAGTGGTGG AGAGGTGATCGCTGTCCTCTACGGTGACAATCAGGCCGAGCGCAGGCCAATCGTCGGGACGGAGGCCCTGGAGATTTTTC TGTCCCAAGCCGGGCTGGTCATGGAAAAAGCGCTGCTGGAAAGTAAACTTCGGAGTGTAACGTGA
Upstream 100 bases:
>100_bases GGATCGCCGGGAGTAAACGTGCTTTACTTGAACCGGACGAGTAGTTTATGATGAGCGCCGTTTCTACCACTGTTTTCCGG GTTTTTGACCCTCTCATGCC
Downstream 100 bases:
>100_bases AGAAAATCCTTATAGCGGAAGACTCGTCGACCATGCGGTCCCTTCTGGTGGCGACCATCGAGTCCCTCGGCGGATATCTG GTTTCCGAGGCGGCGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator; Two Component Signal Transduction Response Regulator
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSLVGSLEDLGLGEILQIISLSSKSGILRIKSRGREGTIVFRLGQVIQATSSTLLENIGEVLIRKGKLDLATLRSALACQ ESEGFQERLGSILVRRFGVPATVVEDVAREQVERVVYTLFAWVEGTFEFILQDNVATAGTIRMDPLQFMLEQGLNPRLLM AEANQDRRRRDIPRDEEPLRVPQPPEGRTVVPAPPPGHINIGEELRLEMGEELAKTGEEGYSHADRMTLLRGMLEELHNP ELGCGITLLVLRLAAEFMDRAVIFRVLKEEVVGLGQFGLDDRGGGADERIRSLRIPRGEPSLFSGVIEAKHPAVVRPEAN EWNRYLFGRIGVEIPHEVFLGPIVSGGEVIAVLYGDNQAERRPIVGTEALEIFLSQAGLVMEKALLESKLRSVT
Sequences:
>Translated_394_residues MSLVGSLEDLGLGEILQIISLSSKSGILRIKSRGREGTIVFRLGQVIQATSSTLLENIGEVLIRKGKLDLATLRSALACQ ESEGFQERLGSILVRRFGVPATVVEDVAREQVERVVYTLFAWVEGTFEFILQDNVATAGTIRMDPLQFMLEQGLNPRLLM AEANQDRRRRDIPRDEEPLRVPQPPEGRTVVPAPPPGHINIGEELRLEMGEELAKTGEEGYSHADRMTLLRGMLEELHNP ELGCGITLLVLRLAAEFMDRAVIFRVLKEEVVGLGQFGLDDRGGGADERIRSLRIPRGEPSLFSGVIEAKHPAVVRPEAN EWNRYLFGRIGVEIPHEVFLGPIVSGGEVIAVLYGDNQAERRPIVGTEALEIFLSQAGLVMEKALLESKLRSVT >Mature_393_residues SLVGSLEDLGLGEILQIISLSSKSGILRIKSRGREGTIVFRLGQVIQATSSTLLENIGEVLIRKGKLDLATLRSALACQE SEGFQERLGSILVRRFGVPATVVEDVAREQVERVVYTLFAWVEGTFEFILQDNVATAGTIRMDPLQFMLEQGLNPRLLMA EANQDRRRRDIPRDEEPLRVPQPPEGRTVVPAPPPGHINIGEELRLEMGEELAKTGEEGYSHADRMTLLRGMLEELHNPE LGCGITLLVLRLAAEFMDRAVIFRVLKEEVVGLGQFGLDDRGGGADERIRSLRIPRGEPSLFSGVIEAKHPAVVRPEANE WNRYLFGRIGVEIPHEVFLGPIVSGGEVIAVLYGDNQAERRPIVGTEALEIFLSQAGLVMEKALLESKLRSVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43538; Mature: 43407
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVGSLEDLGLGEILQIISLSSKSGILRIKSRGREGTIVFRLGQVIQATSSTLLENIGE CCCCCCCHHCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHH VLIRKGKLDLATLRSALACQESEGFQERLGSILVRRFGVPATVVEDVAREQVERVVYTLF HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AWVEGTFEFILQDNVATAGTIRMDPLQFMLEQGLNPRLLMAEANQDRRRRDIPRDEEPLR HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCC VPQPPEGRTVVPAPPPGHINIGEELRLEMGEELAKTGEEGYSHADRMTLLRGMLEELHNP CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ELGCGITLLVLRLAAEFMDRAVIFRVLKEEVVGLGQFGLDDRGGGADERIRSLRIPRGEP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCH SLFSGVIEAKHPAVVRPEANEWNRYLFGRIGVEIPHEVFLGPIVSGGEVIAVLYGDNQAE HHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHCCEECCCCEEEEEECCCCCC RRPIVGTEALEIFLSQAGLVMEKALLESKLRSVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLVGSLEDLGLGEILQIISLSSKSGILRIKSRGREGTIVFRLGQVIQATSSTLLENIGE CCCCCCHHCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHH VLIRKGKLDLATLRSALACQESEGFQERLGSILVRRFGVPATVVEDVAREQVERVVYTLF HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AWVEGTFEFILQDNVATAGTIRMDPLQFMLEQGLNPRLLMAEANQDRRRRDIPRDEEPLR HHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCC VPQPPEGRTVVPAPPPGHINIGEELRLEMGEELAKTGEEGYSHADRMTLLRGMLEELHNP CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC ELGCGITLLVLRLAAEFMDRAVIFRVLKEEVVGLGQFGLDDRGGGADERIRSLRIPRGEP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCH SLFSGVIEAKHPAVVRPEANEWNRYLFGRIGVEIPHEVFLGPIVSGGEVIAVLYGDNQAE HHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHCCEECCCCEEEEEECCCCCC RRPIVGTEALEIFLSQAGLVMEKALLESKLRSVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA