Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222663
Identifier: 78222663
GI number: 78222663
Start: 1621498
End: 1622802
Strand: Reverse
Name: 78222663
Synonym: Gmet_1451
Alternate gene names: NA
Gene position: 1622802-1621498 (Counterclockwise)
Preceding gene: 78222664
Following gene: 78222662
Centisome position: 40.6
GC content: 61.0
Gene sequence:
>1305_bases ATGAAGAAGAAAACCCTCAAGACCATGGTCGCTGCAGCGGCGGTCCTTTCCTCCGCCGCCATTGCCCAGGCCGCCACCGT CGATATCAACATCTACGGTGCCTCCGCCCAATACCTCTTCTGGAACACAGCAGCCTCCAATTTCCTCACCGCCAAAGGAT GCACCTCCATCACCAAGGCAGAAGACAGCAGCAAAAAGCACGGCATTACTTCCGGTAAGGCCTGTTCCGGTTTCGGCGGC AACGACGTAATCATTCGTTACTCCTCCAAGGCCTCCTATGAGTCGGTCCGCTCCCTGAAGGGGACCACCAACCCCGACGG CTGCCCCAACGCCTACCAGCGTAAAATGGCCGACTCGGTCACCGCTCCCAACACCCTTACCTGCCAGACCATTACCCTCG GGGCGTCCGACGTATCCGGCGAGGCTTTTGTTCAGGAGAGCCATGGCCAGAAGTTCGGCCCCCTTGGCGGCGGTCTTGTT GATAACGTCCTGACCGGCGAGAATGCTTCCGGCCTCACTTCTTACAATCCCCTCGTTGTCCCCTTCGGCTTCTTTGTGAA CAATGCCGTAACTGCCAAGAAGTGCACCACCGCTGCCGGGGCCATGTCCGGGGAATACTGCGCCAGCGACGCCGACTGCG GCGGTACAGCCGGATCCTGCGGTGCTGCCAGCACAATCGACAACATTACCCGCCTCCAGGCGGTATCCATATTCTCTGGC ACGATAGCCGACTGGTCCGACTTCGGCGGCTACTTCACGGCTCAACCGGTTGTTGCGTGCCTCCGCCACGCCGGATCCGG CACAGCAGCAGCCCTCGACTTCTCGGTGGTCCGCGGCAATGGTTGGGGTAGTGGCCTCGCCAGCTTCGAGAACCCCGGCG CCGTCTGGTTCAACGAAGGCTCCACCGACCTCATCAAGTGCGTAAACGGTAACAGCACCGCAACCCCCTCCGGCTCCGCA ATCGGCGCCATAGGCTATGCAGACGCCGACCAGACCGTTGGTGCGGCCGGCACCAGCCAGAACGTGAAGGCTGTCAAGTA CAACGGCCACTTCGGTACCCGCTACAGCATCCGCAACGGCGTCTACGATTTCTGGACCACCCAGTGGGTCTATGAGGACG CTGCCCGCACCTCCCTTGCACAGCGCCCGGTAGTCGACGCTCTGGTAGCTTACGCCTCCAGCCCGGCCAACGTCCCCGCC ACCAAGGCCAAGTACTGGGCCACCAAGGACGAGATGAAGTTCTTCAAGGGCTCTGAAGCCGAGTATCCTTATCTTCTCGG TGCCATCAACCCGCAGCTTCCCTAA
Upstream 100 bases:
>100_bases CTCCTCGGACTCGTCGGTATCCGCCGCAAGAAGCAGTAAGCACAGCATCAATCCCCCCGGTCACCCGGGGGGATAACCAA TACATAAGGAGACTAATGCA
Downstream 100 bases:
>100_bases CCCCGCCCACCTGCGGTGTATCTTCGAGGGGCCTCGACCGAGGCCCCTCTTTTTCCATTCCGGATCATGGAGGAACCAAT GAAAACAATCACCGCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKKKTLKTMVAAAAVLSSAAIAQAATVDINIYGASAQYLFWNTAASNFLTAKGCTSITKAEDSSKKHGITSGKACSGFGG NDVIIRYSSKASYESVRSLKGTTNPDGCPNAYQRKMADSVTAPNTLTCQTITLGASDVSGEAFVQESHGQKFGPLGGGLV DNVLTGENASGLTSYNPLVVPFGFFVNNAVTAKKCTTAAGAMSGEYCASDADCGGTAGSCGAASTIDNITRLQAVSIFSG TIADWSDFGGYFTAQPVVACLRHAGSGTAAALDFSVVRGNGWGSGLASFENPGAVWFNEGSTDLIKCVNGNSTATPSGSA IGAIGYADADQTVGAAGTSQNVKAVKYNGHFGTRYSIRNGVYDFWTTQWVYEDAARTSLAQRPVVDALVAYASSPANVPA TKAKYWATKDEMKFFKGSEAEYPYLLGAINPQLP
Sequences:
>Translated_434_residues MKKKTLKTMVAAAAVLSSAAIAQAATVDINIYGASAQYLFWNTAASNFLTAKGCTSITKAEDSSKKHGITSGKACSGFGG NDVIIRYSSKASYESVRSLKGTTNPDGCPNAYQRKMADSVTAPNTLTCQTITLGASDVSGEAFVQESHGQKFGPLGGGLV DNVLTGENASGLTSYNPLVVPFGFFVNNAVTAKKCTTAAGAMSGEYCASDADCGGTAGSCGAASTIDNITRLQAVSIFSG TIADWSDFGGYFTAQPVVACLRHAGSGTAAALDFSVVRGNGWGSGLASFENPGAVWFNEGSTDLIKCVNGNSTATPSGSA IGAIGYADADQTVGAAGTSQNVKAVKYNGHFGTRYSIRNGVYDFWTTQWVYEDAARTSLAQRPVVDALVAYASSPANVPA TKAKYWATKDEMKFFKGSEAEYPYLLGAINPQLP >Mature_434_residues MKKKTLKTMVAAAAVLSSAAIAQAATVDINIYGASAQYLFWNTAASNFLTAKGCTSITKAEDSSKKHGITSGKACSGFGG NDVIIRYSSKASYESVRSLKGTTNPDGCPNAYQRKMADSVTAPNTLTCQTITLGASDVSGEAFVQESHGQKFGPLGGGLV DNVLTGENASGLTSYNPLVVPFGFFVNNAVTAKKCTTAAGAMSGEYCASDADCGGTAGSCGAASTIDNITRLQAVSIFSG TIADWSDFGGYFTAQPVVACLRHAGSGTAAALDFSVVRGNGWGSGLASFENPGAVWFNEGSTDLIKCVNGNSTATPSGSA IGAIGYADADQTVGAAGTSQNVKAVKYNGHFGTRYSIRNGVYDFWTTQWVYEDAARTSLAQRPVVDALVAYASSPANVPA TKAKYWATKDEMKFFKGSEAEYPYLLGAINPQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44946; Mature: 44946
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTLKTMVAAAAVLSSAAIAQAATVDINIYGASAQYLFWNTAASNFLTAKGCTSITKA CCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEEECCCCCEEEECCCCCHHHC EDSSKKHGITSGKACSGFGGNDVIIRYSSKASYESVRSLKGTTNPDGCPNAYQRKMADSV CCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHC TAPNTLTCQTITLGASDVSGEAFVQESHGQKFGPLGGGLVDNVLTGENASGLTSYNPLVV CCCCCEEEEEEEECCCCCCCHHHEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE PFGFFVNNAVTAKKCTTAAGAMSGEYCASDADCGGTAGSCGAASTIDNITRLQAVSIFSG EHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC TIADWSDFGGYFTAQPVVACLRHAGSGTAAALDFSVVRGNGWGSGLASFENPGAVWFNEG CCCCHHHCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCC STDLIKCVNGNSTATPSGSAIGAIGYADADQTVGAAGTSQNVKAVKYNGHFGTRYSIRNG CCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCC VYDFWTTQWVYEDAARTSLAQRPVVDALVAYASSPANVPATKAKYWATKDEMKFFKGSEA CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHCCCCC EYPYLLGAINPQLP CCCEEEECCCCCCC >Mature Secondary Structure MKKKTLKTMVAAAAVLSSAAIAQAATVDINIYGASAQYLFWNTAASNFLTAKGCTSITKA CCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEEECCCCCEEEECCCCCHHHC EDSSKKHGITSGKACSGFGGNDVIIRYSSKASYESVRSLKGTTNPDGCPNAYQRKMADSV CCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHC TAPNTLTCQTITLGASDVSGEAFVQESHGQKFGPLGGGLVDNVLTGENASGLTSYNPLVV CCCCCEEEEEEEECCCCCCCHHHEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE PFGFFVNNAVTAKKCTTAAGAMSGEYCASDADCGGTAGSCGAASTIDNITRLQAVSIFSG EHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC TIADWSDFGGYFTAQPVVACLRHAGSGTAAALDFSVVRGNGWGSGLASFENPGAVWFNEG CCCCHHHCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCC STDLIKCVNGNSTATPSGSAIGAIGYADADQTVGAAGTSQNVKAVKYNGHFGTRYSIRNG CCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCC VYDFWTTQWVYEDAARTSLAQRPVVDALVAYASSPANVPATKAKYWATKDEMKFFKGSEA CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHCCCCC EYPYLLGAINPQLP CCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA