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The map label for this gene is yccZ [C]

Identifier: 78222656

GI number: 78222656

Start: 1613644

End: 1614402

Strand: Direct

Name: yccZ [C]

Synonym: Gmet_1444

Alternate gene names: 78222656

Gene position: 1613644-1614402 (Clockwise)

Preceding gene: 78222655

Following gene: 78222657

Centisome position: 40.37

GC content: 59.29

Gene sequence:

>759_bases
ATGGCCACCGAGCCTGCCGAAAAAGCCGTCGCTGCTGTAGCAACGGAGAATCCCGGTACTACTGAAAACCGGCAGCCTGT
CGTTGCGGAATCGCCAGCGAAGACCGTGGCTGATGATACTACGATTCCGGTTCAGGAGCAGGGCGCCATTGGTACCAGTG
TTGCCGATCAAGTGCCTGCGACTGGTGAGATGCCGGCGACTAAGGAAGTGCCTGCTCCCAATCCCGTGGTGCTTGCCGGG
GTGGATCAGCCCACGTCGGTTCCCCCGCAGGCTGGCGATGCCTATGTCATCGGTGCCGGCGATGTTCTCGATATCGCGGT
CTGGCGCGACGAGAGCCTGACCAAGACGGTGGTGGTGCTTCCCGACGGGACCATTTCGTTTCCCCTTATCGGTGTGGTCA
AGGCGGGTGGGAAGACCGTGGAGCAACTCAAGGATGAGATCAGGACGCGCCTTTCGAGCTACTTTTCCGACCTGACCCTC
TCCCTTGAGGTGCGGCAGGCCAACAGCATGATGATCTTTGTGGTGGGAAAGGTGAATTCTCCCGGGCGTCATCCGATCAG
CTCGCCTGTGAACGTGTTACAGGCCCTGGCCATGGCGGGCGGGGTAAATCCCTTTGCCAAGAAGGATGACATCAAGATTT
TCCGCCAGGACGAGGGGAAAACCGTCATCTTTTCCTTTGCCTACAGCGAGGTGTCCCGGGGTAACCGGCTGGAAGAGAAT
ATTGTCCTGAGGCGCGGTGACCTGATCGTCGTCCCCTGA

Upstream 100 bases:

>100_bases
TGCAGACTCGATTCCTTCGGACAGTGCCGCCGTTCCGCCCGCTGTCACCGATGCGACTGGAACTGTTGCGTCCGACAACG
AGCCCGGGTCTCCCGTTCTG

Downstream 100 bases:

>100_bases
TCCGATTTAATCGACGAGGCTTGCCATGTCTTTGCCATGCCGCAGACCGGTTTCGGCCGTGCAGGTGATCTCTGCCGCCG
CAGCCCTGATCGGAACTGCC

Product: polysaccharide export protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MATEPAEKAVAAVATENPGTTENRQPVVAESPAKTVADDTTIPVQEQGAIGTSVADQVPATGEMPATKEVPAPNPVVLAG
VDQPTSVPPQAGDAYVIGAGDVLDIAVWRDESLTKTVVVLPDGTISFPLIGVVKAGGKTVEQLKDEIRTRLSSYFSDLTL
SLEVRQANSMMIFVVGKVNSPGRHPISSPVNVLQALAMAGGVNPFAKKDDIKIFRQDEGKTVIFSFAYSEVSRGNRLEEN
IVLRRGDLIVVP

Sequences:

>Translated_252_residues
MATEPAEKAVAAVATENPGTTENRQPVVAESPAKTVADDTTIPVQEQGAIGTSVADQVPATGEMPATKEVPAPNPVVLAG
VDQPTSVPPQAGDAYVIGAGDVLDIAVWRDESLTKTVVVLPDGTISFPLIGVVKAGGKTVEQLKDEIRTRLSSYFSDLTL
SLEVRQANSMMIFVVGKVNSPGRHPISSPVNVLQALAMAGGVNPFAKKDDIKIFRQDEGKTVIFSFAYSEVSRGNRLEEN
IVLRRGDLIVVP
>Mature_251_residues
ATEPAEKAVAAVATENPGTTENRQPVVAESPAKTVADDTTIPVQEQGAIGTSVADQVPATGEMPATKEVPAPNPVVLAGV
DQPTSVPPQAGDAYVIGAGDVLDIAVWRDESLTKTVVVLPDGTISFPLIGVVKAGGKTVEQLKDEIRTRLSSYFSDLTLS
LEVRQANSMMIFVVGKVNSPGRHPISSPVNVLQALAMAGGVNPFAKKDDIKIFRQDEGKTVIFSFAYSEVSRGNRLEENI
VLRRGDLIVVP

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=174, Percent_Identity=31.6091954022989, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788376, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 26614; Mature: 26482

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEPAEKAVAAVATENPGTTENRQPVVAESPAKTVADDTTIPVQEQGAIGTSVADQVPA
CCCCHHHHHEEEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHHCCCC
TGEMPATKEVPAPNPVVLAGVDQPTSVPPQAGDAYVIGAGDVLDIAVWRDESLTKTVVVL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEE
PDGTISFPLIGVVKAGGKTVEQLKDEIRTRLSSYFSDLTLSLEVRQANSMMIFVVGKVNS
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCC
PGRHPISSPVNVLQALAMAGGVNPFAKKDDIKIFRQDEGKTVIFSFAYSEVSRGNRLEEN
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEHHHHCCCCCCCC
IVLRRGDLIVVP
EEEEECCEEEEC
>Mature Secondary Structure 
ATEPAEKAVAAVATENPGTTENRQPVVAESPAKTVADDTTIPVQEQGAIGTSVADQVPA
CCCHHHHHEEEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHHCCCC
TGEMPATKEVPAPNPVVLAGVDQPTSVPPQAGDAYVIGAGDVLDIAVWRDESLTKTVVVL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEE
PDGTISFPLIGVVKAGGKTVEQLKDEIRTRLSSYFSDLTLSLEVRQANSMMIFVVGKVNS
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCC
PGRHPISSPVNVLQALAMAGGVNPFAKKDDIKIFRQDEGKTVIFSFAYSEVSRGNRLEEN
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEHHHHCCCCCCCC
IVLRRGDLIVVP
EEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]