Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222645
Identifier: 78222645
GI number: 78222645
Start: 1603107
End: 1603262
Strand: Direct
Name: 78222645
Synonym: Gmet_1433
Alternate gene names: NA
Gene position: 1603107-1603262 (Clockwise)
Preceding gene: 78222644
Following gene: 78222646
Centisome position: 40.1
GC content: 53.85
Gene sequence:
>156_bases ATGAGCAGTTCAAAGAGGCAGGCATGTGTCGTCTGCGCCTGGCGCGAAACATGTGCGAAGAAATTCTGCGTCACCGATGG CGGCGCGCGCTGTCCCGATTTCAGCCGTGACGTTTCCATTAAGGTTCCGGACGAAGAATCGGATGAAATACAATGA
Upstream 100 bases:
>100_bases AGGCCAAGACTCAGCAGCCGGTTTCATCGGCGGTCGAGAAGAAGCGATAGGGTGAGCGGAGAGAATCCGCTCTTTCCTTT TTGTCATCAGGAGATTAACC
Downstream 100 bases:
>100_bases GTCAACTGGAGGGAACAATGAAGGATAGGGTTCGTTCTCTGGTCGCCGAGGGAATCGAGCGGTGTTTTGCCGACGGCTCT CTTGCCTCGAACCAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSSSKRQACVVCAWRETCAKKFCVTDGGARCPDFSRDVSIKVPDEESDEIQ
Sequences:
>Translated_51_residues MSSSKRQACVVCAWRETCAKKFCVTDGGARCPDFSRDVSIKVPDEESDEIQ >Mature_50_residues SSSKRQACVVCAWRETCAKKFCVTDGGARCPDFSRDVSIKVPDEESDEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5670; Mature: 5539
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 10.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSKRQACVVCAWRETCAKKFCVTDGGARCPDFSRDVSIKVPDEESDEIQ CCCCCCCEEEEEECHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure SSSKRQACVVCAWRETCAKKFCVTDGGARCPDFSRDVSIKVPDEESDEIQ CCCCCCEEEEEECHHHHHHEEECCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA