Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is apgM [H]
Identifier: 78222640
GI number: 78222640
Start: 1598322
End: 1599521
Strand: Direct
Name: apgM [H]
Synonym: Gmet_1428
Alternate gene names: 78222640
Gene position: 1598322-1599521 (Clockwise)
Preceding gene: 78222639
Following gene: 78222642
Centisome position: 39.98
GC content: 59.75
Gene sequence:
>1200_bases ATGAAGTATATCGTGCTCCTCGGCGACGGGATGTCGGACGAGGCCGTGAAGGATCTGGACGGAAAGACACCACTGCAGGC TGCCAAAACGCCGCACATGGATGTCATGGCCCGGCGGGGGAGGATCGGCCTCGCTCACACCGTGCCGAAGGGGCTCCCTC CGGGAAGCGATGTGGCAAATCTCTCGGTGTTCGGCTATGACCCGCGTACCTGCTATACGGGTCGATCACCCCTCGAAGCA GCAAGCATGGGGGTTCAACTCGGGCCCGATGACGTGGCGTTCCGGGTTAATCTCGTGAATCTCCTGCCGACCAAGGGGAC GCTCGTCATGAACGACTACTCGGCGGGGCATATCTCCACCGAAGAGGGACGCGAACTCATCGAGGCCATCCAGCAGCAGA TCGGCGATGACGAGTTCCAGTTCTACCCCGGCGTGGGATACCGCCATCTCATGGTATGGCGCAACGGCAAAAGCGGCATG TCCGCCACCCCTCCCCATGACATCTCGGGGAAAAGCATCCTCGACTACCTTCCGAAGGGAGAGGGGGCCGACAAGCTCAT CTATCTGATGAACTCCTCCCAGATGATACTCAACAATCATCCCCAATACCGGCGGCGCCTTGAAGCAGACAAGATCCCGG CGAATTCCATCTGGCTCTGGGGGCACGGCAAAGCACCCCGGATGGAGCCCTTCAAGGAAAAGTTCGGCCTTGCCGGGGCG GTAATTTCCGCGGTCGATCTCATAAACGGTATCGGCATCGGAGCGGGCCTCGACGTGATTCGGGTCGAGGGGGCCACCGG TTACCTGGACACCAACTACGAAGGCAAGGTCCAGGCAGCTCTTGAGGCCCTGGAGACCCATGACTACGTGTACCTTCACG TTGAGGCGCCCGACGAGGCTTCCCATTCGGGGAACCTTTCCCACAAGCTCCAGGCCATCGAAGATTTCGATGCCAGGGTT GTCGGCCCCATCATGGAAGGGATCAGGCGTTTTGGTTCGTTCCGGATACTCTGTACTCCCGATCACCCGACTCCCCTCAG GCTGAAGACACATACGGGCGCGCCTGTGCCCTTCATCATCTACGATGGAGGAGAATCGGAAGATGATTCGATTGCGGGCT ATGACGAAGATTCGGCCCGGACTTCCGGCCTGGTGCTGGAGGAAGGGCACCGGCTCATGGAGCTTCTGCTTGAAAGGTGA
Upstream 100 bases:
>100_bases TGACCCGGGAGCGATTGAAACGCATCCACGAGGAATACCATCCACGGGGATAGGGCGGGTCGGTGCAGACAGGAAAACTC ACTCAGGAAAGGACAGGGCA
Downstream 100 bases:
>100_bases CCAGGCAGGATGTTGTTAGGTGAGGAGAGAGACAGGGCGGGTTATGGGATCCGCCCTGTCCTTTTGCGTCACCAGCGCCG GTAAACCGGCCCCAGGGGGC
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKYIVLLGDGMSDEAVKDLDGKTPLQAAKTPHMDVMARRGRIGLAHTVPKGLPPGSDVANLSVFGYDPRTCYTGRSPLEA ASMGVQLGPDDVAFRVNLVNLLPTKGTLVMNDYSAGHISTEEGRELIEAIQQQIGDDEFQFYPGVGYRHLMVWRNGKSGM SATPPHDISGKSILDYLPKGEGADKLIYLMNSSQMILNNHPQYRRRLEADKIPANSIWLWGHGKAPRMEPFKEKFGLAGA VISAVDLINGIGIGAGLDVIRVEGATGYLDTNYEGKVQAALEALETHDYVYLHVEAPDEASHSGNLSHKLQAIEDFDARV VGPIMEGIRRFGSFRILCTPDHPTPLRLKTHTGAPVPFIIYDGGESEDDSIAGYDEDSARTSGLVLEEGHRLMELLLER
Sequences:
>Translated_399_residues MKYIVLLGDGMSDEAVKDLDGKTPLQAAKTPHMDVMARRGRIGLAHTVPKGLPPGSDVANLSVFGYDPRTCYTGRSPLEA ASMGVQLGPDDVAFRVNLVNLLPTKGTLVMNDYSAGHISTEEGRELIEAIQQQIGDDEFQFYPGVGYRHLMVWRNGKSGM SATPPHDISGKSILDYLPKGEGADKLIYLMNSSQMILNNHPQYRRRLEADKIPANSIWLWGHGKAPRMEPFKEKFGLAGA VISAVDLINGIGIGAGLDVIRVEGATGYLDTNYEGKVQAALEALETHDYVYLHVEAPDEASHSGNLSHKLQAIEDFDARV VGPIMEGIRRFGSFRILCTPDHPTPLRLKTHTGAPVPFIIYDGGESEDDSIAGYDEDSARTSGLVLEEGHRLMELLLER >Mature_399_residues MKYIVLLGDGMSDEAVKDLDGKTPLQAAKTPHMDVMARRGRIGLAHTVPKGLPPGSDVANLSVFGYDPRTCYTGRSPLEA ASMGVQLGPDDVAFRVNLVNLLPTKGTLVMNDYSAGHISTEEGRELIEAIQQQIGDDEFQFYPGVGYRHLMVWRNGKSGM SATPPHDISGKSILDYLPKGEGADKLIYLMNSSQMILNNHPQYRRRLEADKIPANSIWLWGHGKAPRMEPFKEKFGLAGA VISAVDLINGIGIGAGLDVIRVEGATGYLDTNYEGKVQAALEALETHDYVYLHVEAPDEASHSGNLSHKLQAIEDFDARV VGPIMEGIRRFGSFRILCTPDHPTPLRLKTHTGAPVPFIIYDGGESEDDSIAGYDEDSARTSGLVLEEGHRLMELLLER
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR013371 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 43619; Mature: 43619
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIVLLGDGMSDEAVKDLDGKTPLQAAKTPHMDVMARRGRIGLAHTVPKGLPPGSDVAN CEEEEEECCCCCHHHHHHCCCCCCCHHCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCE LSVFGYDPRTCYTGRSPLEAASMGVQLGPDDVAFRVNLVNLLPTKGTLVMNDYSAGHIST EEEEECCCCCEECCCCCHHHHHCCCEECCCCEEEEEEEEEECCCCCEEEEECCCCCCCCH EEGRELIEAIQQQIGDDEFQFYPGVGYRHLMVWRNGKSGMSATPPHDISGKSILDYLPKG HHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCC EGADKLIYLMNSSQMILNNHPQYRRRLEADKIPANSIWLWGHGKAPRMEPFKEKFGLAGA CCCCEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCHHHH VISAVDLINGIGIGAGLDVIRVEGATGYLDTNYEGKVQAALEALETHDYVYLHVEAPDEA HHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCC SHSGNLSHKLQAIEDFDARVVGPIMEGIRRFGSFRILCTPDHPTPLRLKTHTGAPVPFII CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE YDGGESEDDSIAGYDEDSARTSGLVLEEGHRLMELLLER ECCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHHCC >Mature Secondary Structure MKYIVLLGDGMSDEAVKDLDGKTPLQAAKTPHMDVMARRGRIGLAHTVPKGLPPGSDVAN CEEEEEECCCCCHHHHHHCCCCCCCHHCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCE LSVFGYDPRTCYTGRSPLEAASMGVQLGPDDVAFRVNLVNLLPTKGTLVMNDYSAGHIST EEEEECCCCCEECCCCCHHHHHCCCEECCCCEEEEEEEEEECCCCCEEEEECCCCCCCCH EEGRELIEAIQQQIGDDEFQFYPGVGYRHLMVWRNGKSGMSATPPHDISGKSILDYLPKG HHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCC EGADKLIYLMNSSQMILNNHPQYRRRLEADKIPANSIWLWGHGKAPRMEPFKEKFGLAGA CCCCEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCHHHH VISAVDLINGIGIGAGLDVIRVEGATGYLDTNYEGKVQAALEALETHDYVYLHVEAPDEA HHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCC SHSGNLSHKLQAIEDFDARVVGPIMEGIRRFGSFRILCTPDHPTPLRLKTHTGAPVPFII CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCEEEE YDGGESEDDSIAGYDEDSARTSGLVLEEGHRLMELLLER ECCCCCCCCCCCCCCCCCCCCCCEEHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA