Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222621
Identifier: 78222621
GI number: 78222621
Start: 1576844
End: 1578118
Strand: Direct
Name: 78222621
Synonym: Gmet_1409
Alternate gene names: NA
Gene position: 1576844-1578118 (Clockwise)
Preceding gene: 78222620
Following gene: 78222622
Centisome position: 39.45
GC content: 40.94
Gene sequence:
>1275_bases ATGAATTACGAGAACTTCGCACAGTTATTAGAAGACCGTTACAGCGACTTTTGCCAACGTTGGCCATTGTCGAGCTTTGT GCTGGACCATTACCTTCGCGCGAATTTGTTGCAACGGCCTGCCATTATCAACCAGCACAGGAATTATTTACAGCAAACCA TCCGTTACGGGAAAATAGTTGATTTACTGTCGCGTGGTTTTCCTAAAATCATCAAGAATTCAGATGACAAGCCCTCCGTT TTGCTTGCAGCACCGTTAATTTTTAGTTTTCCGTGGTTGGCAAAAGAGGTTAGGGACCACAATTCTTCAAAACTCTTTAC TCTGAATTTTTTTGGACTTGCAAAATACTATCGGCAACTTAGGCGTATGGGTTATTCCTATGCGTCCTTATTTGACCCAT TGTTTAAAGTTGAGTGGAGCAAGGCTCTAGGTCAAGGTATGAAAACTTTGACCGAAACAGACCGTATGTTGAGTTGGTCT GGCTGGGATAACCTTGAGTTATTGACGGAGCAAACAGTTTCCGGATTAACTACACGGTTATCGCGACTTAATTGTGTTTC AGTTGTTATGTTGCGAGATTTTTTTTGGTATGAGGCGGCTTTGATCCTTGCCTGTAAAAGAGCTGCTATTCCCTGCCATG TAGTTGCCCATGGTTATCCACATTGCGACCCTGAAAATAGTGAATGTTTTGGTTATCTGCCTTTTCGCGGGGATACGCTG TATTGCATGAGCGAAGAATCCTATCACCAGCTTTCACCTTGGGTTGAAGACAAGCATTGCTACTCAGTAAGGTTGTTTTC CAATACACAGAAAGTTAATGGTGAGGGAATTTTATTTATTTCATCTTCAGTGGAAGAAGTTGGTCTTTTAGATGATAAGT ATCGGTTAGCTGTTTATAAAGGTTTACAGGCGGCTGCGAACAAACTCAACTGTCGCGTTACAGTCCGATTTCGCGATGAC GAGCAACTTGACAAAAAAATCAAGCAAGCTGAATCTTTCAATTTCAGATGGACTGTCAAGAATAATATCTCATTGGACGA AGACTTGAAAAATAACAGATATGTTTTTGGCTTTGGTTCAACAGCACTTTTTTTAAGTCATATGCTTGGGCATCCTACGT ATAATGTGAGCAGCTATGGATCGATTGATGGTGTTGAAAATATAGTTCCAGAAAAGATCCCTGATGTTGTTTCTCATGTG CCTGTGTCTTTAGGATTTGTAGACAATAGAACAACTTTTGCCGATATTTTCTGGAAATCCCTTCTCCATGGATGA
Upstream 100 bases:
>100_bases AAATTGCACCGTTGGTAAAAAAAGCCGAAGAATTTGCTTCTGAGCACCCGCTGGAACTGTGTATGGACAGGTTCTGTTCA GTGATTGAAGAACTGAATCA
Downstream 100 bases:
>100_bases ACTCTGGTCACTAAGACTTTTATGAACCTTCGACTGATTAAAGCTGCGGATGCCATTCTCGGACGGGTAGCGACAGTCTT GCTTCCGGCGCCGGTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MNYENFAQLLEDRYSDFCQRWPLSSFVLDHYLRANLLQRPAIINQHRNYLQQTIRYGKIVDLLSRGFPKIIKNSDDKPSV LLAAPLIFSFPWLAKEVRDHNSSKLFTLNFFGLAKYYRQLRRMGYSYASLFDPLFKVEWSKALGQGMKTLTETDRMLSWS GWDNLELLTEQTVSGLTTRLSRLNCVSVVMLRDFFWYEAALILACKRAAIPCHVVAHGYPHCDPENSECFGYLPFRGDTL YCMSEESYHQLSPWVEDKHCYSVRLFSNTQKVNGEGILFISSSVEEVGLLDDKYRLAVYKGLQAAANKLNCRVTVRFRDD EQLDKKIKQAESFNFRWTVKNNISLDEDLKNNRYVFGFGSTALFLSHMLGHPTYNVSSYGSIDGVENIVPEKIPDVVSHV PVSLGFVDNRTTFADIFWKSLLHG
Sequences:
>Translated_424_residues MNYENFAQLLEDRYSDFCQRWPLSSFVLDHYLRANLLQRPAIINQHRNYLQQTIRYGKIVDLLSRGFPKIIKNSDDKPSV LLAAPLIFSFPWLAKEVRDHNSSKLFTLNFFGLAKYYRQLRRMGYSYASLFDPLFKVEWSKALGQGMKTLTETDRMLSWS GWDNLELLTEQTVSGLTTRLSRLNCVSVVMLRDFFWYEAALILACKRAAIPCHVVAHGYPHCDPENSECFGYLPFRGDTL YCMSEESYHQLSPWVEDKHCYSVRLFSNTQKVNGEGILFISSSVEEVGLLDDKYRLAVYKGLQAAANKLNCRVTVRFRDD EQLDKKIKQAESFNFRWTVKNNISLDEDLKNNRYVFGFGSTALFLSHMLGHPTYNVSSYGSIDGVENIVPEKIPDVVSHV PVSLGFVDNRTTFADIFWKSLLHG >Mature_424_residues MNYENFAQLLEDRYSDFCQRWPLSSFVLDHYLRANLLQRPAIINQHRNYLQQTIRYGKIVDLLSRGFPKIIKNSDDKPSV LLAAPLIFSFPWLAKEVRDHNSSKLFTLNFFGLAKYYRQLRRMGYSYASLFDPLFKVEWSKALGQGMKTLTETDRMLSWS GWDNLELLTEQTVSGLTTRLSRLNCVSVVMLRDFFWYEAALILACKRAAIPCHVVAHGYPHCDPENSECFGYLPFRGDTL YCMSEESYHQLSPWVEDKHCYSVRLFSNTQKVNGEGILFISSSVEEVGLLDDKYRLAVYKGLQAAANKLNCRVTVRFRDD EQLDKKIKQAESFNFRWTVKNNISLDEDLKNNRYVFGFGSTALFLSHMLGHPTYNVSSYGSIDGVENIVPEKIPDVVSHV PVSLGFVDNRTTFADIFWKSLLHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48932; Mature: 48932
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYENFAQLLEDRYSDFCQRWPLSSFVLDHYLRANLLQRPAIINQHRNYLQQTIRYGKIV CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DLLSRGFPKIIKNSDDKPSVLLAAPLIFSFPWLAKEVRDHNSSKLFTLNFFGLAKYYRQL HHHHCCCHHHHCCCCCCCCEEEECHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH RRMGYSYASLFDPLFKVEWSKALGQGMKTLTETDRMLSWSGWDNLELLTEQTVSGLTTRL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH SRLNCVSVVMLRDFFWYEAALILACKRAAIPCHVVAHGYPHCDPENSECFGYLPFRGDTL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEE YCMSEESYHQLSPWVEDKHCYSVRLFSNTQKVNGEGILFISSSVEEVGLLDDKYRLAVYK EEECCCCHHHCCCCCCCCCEEEEEEECCCCEECCCEEEEEECCHHHHCCCCCCHHHHHHH GLQAAANKLNCRVTVRFRDDEQLDKKIKQAESFNFRWTVKNNISLDEDLKNNRYVFGFGS HHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECH TALFLSHMLGHPTYNVSSYGSIDGVENIVPEKIPDVVSHVPVSLGFVDNRTTFADIFWKS HHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH LLHG HHCC >Mature Secondary Structure MNYENFAQLLEDRYSDFCQRWPLSSFVLDHYLRANLLQRPAIINQHRNYLQQTIRYGKIV CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DLLSRGFPKIIKNSDDKPSVLLAAPLIFSFPWLAKEVRDHNSSKLFTLNFFGLAKYYRQL HHHHCCCHHHHCCCCCCCCEEEECHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH RRMGYSYASLFDPLFKVEWSKALGQGMKTLTETDRMLSWSGWDNLELLTEQTVSGLTTRL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH SRLNCVSVVMLRDFFWYEAALILACKRAAIPCHVVAHGYPHCDPENSECFGYLPFRGDTL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEE YCMSEESYHQLSPWVEDKHCYSVRLFSNTQKVNGEGILFISSSVEEVGLLDDKYRLAVYK EEECCCCHHHCCCCCCCCCEEEEEEECCCCEECCCEEEEEECCHHHHCCCCCCHHHHHHH GLQAAANKLNCRVTVRFRDDEQLDKKIKQAESFNFRWTVKNNISLDEDLKNNRYVFGFGS HHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECH TALFLSHMLGHPTYNVSSYGSIDGVENIVPEKIPDVVSHVPVSLGFVDNRTTFADIFWKS HHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH LLHG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA