Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222603
Identifier: 78222603
GI number: 78222603
Start: 1556833
End: 1558692
Strand: Direct
Name: 78222603
Synonym: Gmet_1391
Alternate gene names: NA
Gene position: 1556833-1558692 (Clockwise)
Preceding gene: 78222602
Following gene: 78222604
Centisome position: 38.95
GC content: 60.22
Gene sequence:
>1860_bases ATGTTTTCATCTTTTTTTAGACGGGTTGATCCCTTTGCGGTGCTGGCAGTGACAGTACCGCTCGCCATCTATCTCCTGAC CCTCGCCCCGTCGGTCACCTTTTTCGACAGCGGCGAATTCATCACCGCTATCCATTCCCTCGGCACAGCCCATTCGCCGG GCTATCCCTTCTTCGTCAACTACGCCAAACCGTTCACCTGGCTCCCCTTCGGGAACATCGCCTTCCGCGTCAATATCGCC ACGGCGGTTTCGGCGGCTGCAGCCTGCTATGGAGCGTACCTTCTGGTGCTGGTCATGCTTCCCGGCGGGGATGCCGACGG CGCTGCGATGCCGCGCTACGTTGCCCGGGGATGCGCCCTCGCCGCGGCCCTGGCCTTTGCCTTCTCGGCCCGCCTCTGGC TCCAGTCGAACCATGACAAGCCCTATCCCCTGGTCTCGTTCATCGTCGCCGTGGTTTTCTGGGCGCTGCTCCGCTTCCGT ACGCGCTACGACGAAGGGGAGGAATGTCCCCACTACGTCTATCTCGGGGCATTCCTCTGCGGACTTGCCACCGGCGCCCA CCAGACAATCATCCTCATGCTGCCGTCCTTTGCCTGGCTCATTATCTCCAAGGATTGGCGGCTCCTGGGGAGGGTAAAGG AATTCCTCATCGCCGTCGCCTTTGGCCTGCTCGGGTTTGCCATCCAGCTTCATATGCCGGTTCGAGCCTTGAAGAATCCT CTCCTCAACTGGGGAGATCCCCGGACATTGGATCAATTTCTCTGGAATCTGCTCCGCAAGGGATATCCCAGCGACCCTCC AGTTCGGGATCTGACGCTACTCTGGCAACAACTGTGCGCCTTCAACGTGCCGTCGGAGTTTACCTGGGTGGGAATCGGCC TCCTGGTGCTGGGGCTTGTGGTCAGTTGCCGGAGGCGGCGGGATGAGGTGATTGCCTACTTTCTCGGTATCGGCACCTCG CTTGTTGTCATCGTGGGTCACTTTAATGCGCAGGCTGACCTGATCTTCCTTACCGAAGAGTTTTTCACCCCCCTCTATCT TCTCTCCGCCGTTTTCATCGGGGTGGGACTGTTCTGGCTTCTGCGGCGGGCCGTCGACAGTATTCAAGTCGAAAAATTGA CGTCGGTGCCGATAAAGGTACTCGTCCTGGTTTTTACCCTGATGCTCCCTGGGACCATCTGCGCCCTCAACTACTACGAG AACGACCAGCATGACAATTATGTGGCCTTCGACTACGCCACGAATACCTTCCGGTCGCTCCCACATAATACCGCTCTATT CACCTGGGGGGACAGCGGCGCCTTCCCTCTCTGGTATCTCCAGGGGGTCGAACGGATGCGGGAGGACCTGGATCTGCTCC ACACGCCACATCTGGTCTTCCGGTGGTATCTGGATGCCTTTCCCCACCTCTTCGGCCAGAGCATGCTGCGGGCCGTGCCC GAAGACGCCCAGTCGGCCGAGTCGGCCCTGAAGATGGCAGTGGCCGAACAGATTGGTCGCAGGCCGGTCTTTATCGATTT CTCCACCCGCTACTCGCTCCCCTTTGCCGAGTACGGCATGCAGCAGCGGGGGATTGCCTACCGCCTGATCCAGGGAGGGA AGGATACGGTCTACCCCCCTGACCTCTCTGTCTGGGGTCTCTACAGCAGCCGGGGCTACACGAGCCAGATGGGGTTCCGG GATCTCGACACGGGGAAGGCAATCCTGATCTATGCCATGGCAAGGCTTGAGGGGGGAGAGATTTTGCTGCGGACGGGATA CCGTTCCCCGGGGGTGGAAGAACTGCGCCTGGCCGCCGCCATCGCGCCAGAACTGAGGGGTCAGGTGGAGCAGATGCTCG GCGCGTACGGGGTGAGGTGA
Upstream 100 bases:
>100_bases GTACCCGTTTTACCTTATTCAAAGGCTCTTTTACCGAACCGATCTCGGTAACGGTTATGTGGCGGTTGCTCTGAATCCGC GTGGAGAGGGGTAGACGGCG
Downstream 100 bases:
>100_bases GCCATGGATATCACGGGAAAGACACGGGTGCTTGGCATTATCGGCTGGCCGGTGGCCCATTCCCTGTCGCCGCTCATGCA GAACGCCGCCCTGGAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MFSSFFRRVDPFAVLAVTVPLAIYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPFFVNYAKPFTWLPFGNIAFRVNIA TAVSAAAACYGAYLLVLVMLPGGDADGAAMPRYVARGCALAAALAFAFSARLWLQSNHDKPYPLVSFIVAVVFWALLRFR TRYDEGEECPHYVYLGAFLCGLATGAHQTIILMLPSFAWLIISKDWRLLGRVKEFLIAVAFGLLGFAIQLHMPVRALKNP LLNWGDPRTLDQFLWNLLRKGYPSDPPVRDLTLLWQQLCAFNVPSEFTWVGIGLLVLGLVVSCRRRRDEVIAYFLGIGTS LVVIVGHFNAQADLIFLTEEFFTPLYLLSAVFIGVGLFWLLRRAVDSIQVEKLTSVPIKVLVLVFTLMLPGTICALNYYE NDQHDNYVAFDYATNTFRSLPHNTALFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFRWYLDAFPHLFGQSMLRAVP EDAQSAESALKMAVAEQIGRRPVFIDFSTRYSLPFAEYGMQQRGIAYRLIQGGKDTVYPPDLSVWGLYSSRGYTSQMGFR DLDTGKAILIYAMARLEGGEILLRTGYRSPGVEELRLAAAIAPELRGQVEQMLGAYGVR
Sequences:
>Translated_619_residues MFSSFFRRVDPFAVLAVTVPLAIYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPFFVNYAKPFTWLPFGNIAFRVNIA TAVSAAAACYGAYLLVLVMLPGGDADGAAMPRYVARGCALAAALAFAFSARLWLQSNHDKPYPLVSFIVAVVFWALLRFR TRYDEGEECPHYVYLGAFLCGLATGAHQTIILMLPSFAWLIISKDWRLLGRVKEFLIAVAFGLLGFAIQLHMPVRALKNP LLNWGDPRTLDQFLWNLLRKGYPSDPPVRDLTLLWQQLCAFNVPSEFTWVGIGLLVLGLVVSCRRRRDEVIAYFLGIGTS LVVIVGHFNAQADLIFLTEEFFTPLYLLSAVFIGVGLFWLLRRAVDSIQVEKLTSVPIKVLVLVFTLMLPGTICALNYYE NDQHDNYVAFDYATNTFRSLPHNTALFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFRWYLDAFPHLFGQSMLRAVP EDAQSAESALKMAVAEQIGRRPVFIDFSTRYSLPFAEYGMQQRGIAYRLIQGGKDTVYPPDLSVWGLYSSRGYTSQMGFR DLDTGKAILIYAMARLEGGEILLRTGYRSPGVEELRLAAAIAPELRGQVEQMLGAYGVR >Mature_619_residues MFSSFFRRVDPFAVLAVTVPLAIYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPFFVNYAKPFTWLPFGNIAFRVNIA TAVSAAAACYGAYLLVLVMLPGGDADGAAMPRYVARGCALAAALAFAFSARLWLQSNHDKPYPLVSFIVAVVFWALLRFR TRYDEGEECPHYVYLGAFLCGLATGAHQTIILMLPSFAWLIISKDWRLLGRVKEFLIAVAFGLLGFAIQLHMPVRALKNP LLNWGDPRTLDQFLWNLLRKGYPSDPPVRDLTLLWQQLCAFNVPSEFTWVGIGLLVLGLVVSCRRRRDEVIAYFLGIGTS LVVIVGHFNAQADLIFLTEEFFTPLYLLSAVFIGVGLFWLLRRAVDSIQVEKLTSVPIKVLVLVFTLMLPGTICALNYYE NDQHDNYVAFDYATNTFRSLPHNTALFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFRWYLDAFPHLFGQSMLRAVP EDAQSAESALKMAVAEQIGRRPVFIDFSTRYSLPFAEYGMQQRGIAYRLIQGGKDTVYPPDLSVWGLYSSRGYTSQMGFR DLDTGKAILIYAMARLEGGEILLRTGYRSPGVEELRLAAAIAPELRGQVEQMLGAYGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93277080, Length=454, Percent_Identity=28.8546255506608, Blast_Score=122, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69289; Mature: 69289
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSFFRRVDPFAVLAVTVPLAIYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPFFVN CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEE YAKPFTWLPFGNIAFRVNIATAVSAAAACYGAYLLVLVMLPGGDADGAAMPRYVARGCAL CCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH AAALAFAFSARLWLQSNHDKPYPLVSFIVAVVFWALLRFRTRYDEGEECPHYVYLGAFLC HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GLATGAHQTIILMLPSFAWLIISKDWRLLGRVKEFLIAVAFGLLGFAIQLHMPVRALKNP HHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC LLNWGDPRTLDQFLWNLLRKGYPSDPPVRDLTLLWQQLCAFNVPSEFTWVGIGLLVLGLV CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VSCRRRRDEVIAYFLGIGTSLVVIVGHFNAQADLIFLTEEFFTPLYLLSAVFIGVGLFWL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH LRRAVDSIQVEKLTSVPIKVLVLVFTLMLPGTICALNYYENDQHDNYVAFDYATNTFRSL HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHHHHHHC PHNTALFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFRWYLDAFPHLFGQSMLRAVP CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC EDAQSAESALKMAVAEQIGRRPVFIDFSTRYSLPFAEYGMQQRGIAYRLIQGGKDTVYPP CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHCCCEEEEECCCCCCCCCC DLSVWGLYSSRGYTSQMGFRDLDTGKAILIYAMARLEGGEILLRTGYRSPGVEELRLAAA CCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHH IAPELRGQVEQMLGAYGVR HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFSSFFRRVDPFAVLAVTVPLAIYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPFFVN CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEE YAKPFTWLPFGNIAFRVNIATAVSAAAACYGAYLLVLVMLPGGDADGAAMPRYVARGCAL CCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH AAALAFAFSARLWLQSNHDKPYPLVSFIVAVVFWALLRFRTRYDEGEECPHYVYLGAFLC HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GLATGAHQTIILMLPSFAWLIISKDWRLLGRVKEFLIAVAFGLLGFAIQLHMPVRALKNP HHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC LLNWGDPRTLDQFLWNLLRKGYPSDPPVRDLTLLWQQLCAFNVPSEFTWVGIGLLVLGLV CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VSCRRRRDEVIAYFLGIGTSLVVIVGHFNAQADLIFLTEEFFTPLYLLSAVFIGVGLFWL HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH LRRAVDSIQVEKLTSVPIKVLVLVFTLMLPGTICALNYYENDQHDNYVAFDYATNTFRSL HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCHHHHHHC PHNTALFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFRWYLDAFPHLFGQSMLRAVP CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC EDAQSAESALKMAVAEQIGRRPVFIDFSTRYSLPFAEYGMQQRGIAYRLIQGGKDTVYPP CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHCCCEEEEECCCCCCCCCC DLSVWGLYSSRGYTSQMGFRDLDTGKAILIYAMARLEGGEILLRTGYRSPGVEELRLAAA CCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHH IAPELRGQVEQMLGAYGVR HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA